Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f14
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         24   2.9  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         24   2.9  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         24   2.9  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   6.6  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         23   6.6  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.8  

>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 377 LIFTVGVSAASLLGCVIWEYENLRVHASSLLRRPGTWLTA 496
           L+F VG + A  +  V +EY  +R   +S+   PG  + A
Sbjct: 8   LLFFVGQTVAYTIPAVRFEYPTMRGFRASIPDTPGLQMFA 47


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 377 LIFTVGVSAASLLGCVIWEYENLRVHASSLLRRPGTWLTA 496
           L+F VG + A  +  V +EY  +R   +S+   PG  + A
Sbjct: 8   LLFFVGQTVAYTIPAVRFEYPTMRGFRASIPDTPGLQMFA 47


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 377 LIFTVGVSAASLLGCVIWEYENLRVHASSLLRRPGTWLTA 496
           L+F VG + A  +  V +EY  +R   +S+   PG  + A
Sbjct: 8   LLFFVGQTVAYTIPAVRFEYPTMRGFRASIPDTPGLQMFA 47


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 377 LIFTVGVSAASLLGCVIWEYENLRVHASSLLRRPGTWLTA 496
           L+F VG + A  +  + +EY  +R   +S+   PG  + A
Sbjct: 8   LLFFVGQTVAYTIPALRFEYPTMRGFRASIPDTPGLQMFA 47


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 377 LIFTVGVSAASLLGCVIWEYENLRVHASSLLRRPGTWLTA 496
           L+F VG + A  +  + +EY  +R   +S+   PG  + A
Sbjct: 8   LLFFVGQTVAYTIPALRFEYPTMRGFRASIPDTPGLQMFA 47


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 368 VKPLIFTVGVSAASLLGCVIW 430
           +K +  T GV   S+LG  +W
Sbjct: 592 IKKMSLTAGVPQGSILGPTLW 612


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,873
Number of Sequences: 2352
Number of extensions: 10181
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)