BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f13 (677 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_1355 + 32851514-32851696,32852132-32852224,32852334-328524... 140 9e-34 04_04_1127 - 31098233-31098326,31099968-31100047,31100198-311003... 138 4e-33 03_06_0191 - 32228642-32228949,32229028-32230567 33 0.28 01_03_0196 - 13696056-13697448,13697676-13697713 30 1.5 01_03_0224 + 13940419-13941786 29 2.6 12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 29 4.5 11_06_0608 - 25442883-25443206,25443420-25443623,25443831-254438... 28 6.0 >04_04_1355 + 32851514-32851696,32852132-32852224,32852334-32852485, 32852702-32852837,32852947-32853102,32853233-32853312, 32853475-32853568 Length = 297 Score = 140 bits (339), Expect = 9e-34 Identities = 78/199 (39%), Positives = 120/199 (60%), Gaps = 5/199 (2%) Frame = +1 Query: 49 DELFDVKNAFYVGNYQQAINEAQSV---SPSTPLVALQRDAFLYRSYIAQGNYRIVQQEL 219 D LF ++N+FYVG YQ I Q++ + +P +RD+ LYRSYIA G++++V E+ Sbjct: 8 DHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDEI 67 Query: 220 KT-ADPMLQPLKSLVDYLLPDAN-KSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDN 393 A LQ ++ L YL A K + + ++ +A SN I +VA T+ HE + Sbjct: 68 GPGAATPLQAVRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERD 127 Query: 394 YEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLI 573 Y ALK ++ ++EL A +Q L M+R D A KQL+++Q +++D TLTQLA AW++L+ Sbjct: 128 YAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLV 187 Query: 574 QGGPGIQDAHYSVMELSER 630 GG IQ+AH +LSE+ Sbjct: 188 MGGSKIQEAHLIFQDLSEK 206 >04_04_1127 - 31098233-31098326,31099968-31100047,31100198-31100353, 31100481-31100616,31101195-31101346,31102307-31102390, 31102495-31102656 Length = 287 Score = 138 bits (334), Expect = 4e-33 Identities = 77/195 (39%), Positives = 120/195 (61%), Gaps = 1/195 (0%) Frame = +1 Query: 49 DELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQEL-KT 225 D LF+++N FY+G YQ AIN + V A +RDA ++RSY+A G+Y++V E+ + Sbjct: 5 DLLFNLRNLFYLGAYQAAINNSD-VPGLDADAAAERDAIVFRSYVALGSYQLVISEIDSS 63 Query: 226 ADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAA 405 A LQ +K L YL D +SAIV+ + ++ SN + ++A I+ HE +Y A Sbjct: 64 AATSLQAVKLLALYLSGD-KESAIVS-LKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEA 121 Query: 406 LKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGP 585 LK H+ +L+L A +Q + M+R D A KQLK++Q I++D TLTQLA AWL++ GG Sbjct: 122 LKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGS 181 Query: 586 GIQDAHYSVMELSER 630 I++A+ + +E+ Sbjct: 182 KIREAYLIFQDFAEK 196 >03_06_0191 - 32228642-32228949,32229028-32230567 Length = 615 Score = 32.7 bits (71), Expect = 0.28 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 4/103 (3%) Frame = +1 Query: 220 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399 K P + S+++ L + V V + TE+++ + + + + N++ Sbjct: 459 KGVSPDVTTYTSVINMLCQEKKYEQAVEIFTKCVVQDTEVASSVLTVFILALC-KQGNFK 517 Query: 400 AALKILH----NAESLELRAFTLQCLLAMNRPDLARKQLKLLQ 516 AL +L N ES+ L+CL+ + DLA + +K ++ Sbjct: 518 GALSVLSCIPSNVESVNSHVILLKCLIDVGEVDLAIEHIKSIR 560 >01_03_0196 - 13696056-13697448,13697676-13697713 Length = 476 Score = 30.3 bits (65), Expect = 1.5 Identities = 11/43 (25%), Positives = 25/43 (58%) Frame = +1 Query: 379 YHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLK 507 YH + ++++K LH+ + L + A + C+++ P L ++ K Sbjct: 16 YHHPSIDSSVKPLHDYQQLLISAIGVNCIISQAAPKLTKRSDK 58 >01_03_0224 + 13940419-13941786 Length = 455 Score = 29.5 bits (63), Expect = 2.6 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +1 Query: 451 TLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGP 585 T +CL+ RP LAR L ++ D+ G ++ W + + GGP Sbjct: 368 TAECLVLRRRPRLARTNLFVVTDVRRVG-FDRVDFGWGDPVYGGP 411 >12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653, 24963146-24963943,24964140-24964422,24964500-24964951, 24965744-24965870,24965950-24966074,24966188-24966858, 24966976-24967093,24967177-24967293,24967564-24967658, 24968152-24968303,24968858-24968913,24969001-24969218, 24969842-24970239,24970345-24970628,24970730-24970836, 24970882-24970968,24971729-24971990,24972228-24972503, 24973197-24973254,24973437-24973756,24973889-24973999, 24974183-24974350,24974494-24974622,24974731-24974820, 24974934-24975040,24975133-24975281,24975584-24975666, 24975749-24975844,24975957-24976079,24976180-24976263, 24976371-24976511,24976652-24976951,24977386-24977453, 24977540-24977642,24979363-24979524,24979613-24981230, 24981270-24981661,24981689-24981991,24982078-24982161, 24982296-24982448,24982678-24982841,24982915-24983062, 24983209-24983331,24983409-24983496,24983686-24983867 Length = 4177 Score = 28.7 bits (61), Expect = 4.5 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = +1 Query: 208 QQELKTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 387 Q+E++T D Q L DY +PD AI D+D ++ + + + + +V T +Y Sbjct: 1317 QKEIQTGDTPHQELLDNRDYTIPDGAIVAI-RDLDQQMYVSIKNTGKKYQVV-GTYHYSL 1374 Query: 388 DNYEAALKILHN 423 + A K+ H+ Sbjct: 1375 SSECALFKVKHH 1386 >11_06_0608 - 25442883-25443206,25443420-25443623,25443831-25443859, 25444335-25444557 Length = 259 Score = 28.3 bits (60), Expect = 6.0 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -1 Query: 167 RNASRWSATRGVEGLTLCASLIA 99 R RW A GV GL LCA+ ++ Sbjct: 39 REQWRWEAVEGVRGLWLCAAFLS 61 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,768,229 Number of Sequences: 37544 Number of extensions: 319099 Number of successful extensions: 774 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 752 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 770 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1726796312 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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