Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f13
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 207 2e-53
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 207 2e-53
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 207 2e-53
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 207 2e-53
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 207 2e-53
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 207 2e-53
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 206 4e-53
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 206 6e-53
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 138 1e-32
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 138 2e-32
BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein. 36 0.17
AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repea... 36 0.17
AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repea... 36 0.17
AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repea... 36 0.17
AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repea... 36 0.17
AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens ... 36 0.17
AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens ... 36 0.17
AK026237-1|BAB15407.1| 308|Homo sapiens protein ( Homo sapiens ... 36 0.17
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 207 bits (506), Expect = 2e-53
Identities = 95/197 (48%), Positives = 144/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 TAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
+ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQG 579
AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L G
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATG 194
Query: 580 GPGIQDAHYSVMELSER 630
G +QDA+Y E++++
Sbjct: 195 GEKLQDAYYIFQEMADK 211
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 207 bits (506), Expect = 2e-53
Identities = 95/197 (48%), Positives = 144/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 TAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
+ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQG 579
AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L G
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATG 194
Query: 580 GPGIQDAHYSVMELSER 630
G +QDA+Y E++++
Sbjct: 195 GEKLQDAYYIFQEMADK 211
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 207 bits (506), Expect = 2e-53
Identities = 95/197 (48%), Positives = 144/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 TAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
+ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQG 579
AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L G
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATG 194
Query: 580 GPGIQDAHYSVMELSER 630
G +QDA+Y E++++
Sbjct: 195 GEKLQDAYYIFQEMADK 211
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 207 bits (506), Expect = 2e-53
Identities = 95/197 (48%), Positives = 144/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 TAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
+ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQG 579
AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L G
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATG 194
Query: 580 GPGIQDAHYSVMELSER 630
G +QDA+Y E++++
Sbjct: 195 GEKLQDAYYIFQEMADK 211
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 207 bits (506), Expect = 2e-53
Identities = 95/197 (48%), Positives = 144/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 TAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
+ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQG 579
AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L G
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATG 194
Query: 580 GPGIQDAHYSVMELSER 630
G +QDA+Y E++++
Sbjct: 195 GEKLQDAYYIFQEMADK 211
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 207 bits (506), Expect = 2e-53
Identities = 95/197 (48%), Positives = 144/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 TAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
+ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQG 579
AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L G
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATG 194
Query: 580 GPGIQDAHYSVMELSER 630
G +QDA+Y E++++
Sbjct: 195 GEKLQDAYYIFQEMADK 211
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 206 bits (504), Expect = 4e-53
Identities = 95/197 (48%), Positives = 144/197 (73%), Gaps = 1/197 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 TAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
+ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQG 579
AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L G
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATG 194
Query: 580 GPGIQDAHYSVMELSER 630
G +QDA+Y E++++
Sbjct: 195 GEKLQDAYYIFQEMADK 211
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 206 bits (503), Expect = 6e-53
Identities = 95/201 (47%), Positives = 144/201 (71%), Gaps = 1/201 (0%)
Frame = +1
Query: 31 RHQQDVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQ 210
R +VDELFDVKNAFY+G+YQQ INEA V S+P ++RD FLYR+Y+AQ + +V
Sbjct: 10 RGSGEVDELFDVKNAFYIGSYQQCINEAHGVKLSSPERDVERDVFLYRAYLAQRKFGVVL 69
Query: 211 QELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 387
E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+
Sbjct: 70 DEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHD 129
Query: 388 DNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLN 567
N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++
Sbjct: 130 QNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVS 189
Query: 568 LIQGGPGIQDAHYSVMELSER 630
L GG +QDA+Y E++++
Sbjct: 190 LATGGEKLQDAYYIFQEMADK 210
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 138 bits (335), Expect = 1e-32
Identities = 63/133 (47%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = +1
Query: 43 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 222
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 223 -TADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 399
++ P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 400 AALKILHNAESLE 438
AAL+ LH +SLE
Sbjct: 135 AALRALHQGDSLE 147
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 138 bits (333), Expect = 2e-32
Identities = 62/146 (42%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
Frame = +1
Query: 196 YRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 372
+ +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+
Sbjct: 3 FGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAAS 62
Query: 373 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 552
IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA
Sbjct: 63 IYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLA 122
Query: 553 QAWLNLIQGGPGIQDAHYSVMELSER 630
AW++L GG +QDA+Y E++++
Sbjct: 123 TAWVSLATGGEKLQDAYYIFQEMADK 148
>BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein.
Length = 502
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 341 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 398
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 399 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 434
>AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 703 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 738
>AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 757 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 792
>AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 703 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 738
>AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 757 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 792
>AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens
cDNA PSEC0261 fis, clone NT2RP3004063, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR. ).
Length = 806
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 703 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 738
>AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens
cDNA PSEC0076 fis, clone NT2RP2003471, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR3. ).
Length = 860
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 757 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 792
>AK026237-1|BAB15407.1| 308|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22584 fis, clone HSI02661. ).
Length = 308
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 82 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 261
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 147 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 204
Query: 262 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 351
Y L+P + S+++A + A +A G E++ +I
Sbjct: 205 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,613,361
Number of Sequences: 237096
Number of extensions: 1824021
Number of successful extensions: 7786
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7777
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -