Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f11
         (277 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062721-1|AAH62721.1|  172|Homo sapiens MRAP protein protein.         27   8.0  
AY079152-1|AAL80042.1|  173|Homo sapiens fat cell-specific low m...    27   8.0  
AF454916-1|AAL51049.1|  113|Homo sapiens C21orf61 short form pro...    27   8.0  
AF454915-1|AAL51048.1|  172|Homo sapiens C21orf61 long form prot...    27   8.0  

>BC062721-1|AAH62721.1|  172|Homo sapiens MRAP protein protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 163 LYRLTANGCGSVYHKPEENPPGGTLTRL 80
           L+ LT NG   V  KP E PPG   ++L
Sbjct: 143 LWELTLNGGPLVRSKPSEPPPGDRTSQL 170


>AY079152-1|AAL80042.1|  173|Homo sapiens fat cell-specific low
           molecular weight protein alpha protein.
          Length = 173

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 163 LYRLTANGCGSVYHKPEENPPGGTLTRL 80
           L+ LT NG   V  KP E PPG   ++L
Sbjct: 144 LWELTLNGGPLVRSKPSEPPPGDRTSQL 171


>AF454916-1|AAL51049.1|  113|Homo sapiens C21orf61 short form
           protein.
          Length = 113

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 163 LYRLTANGCGSVYHKPEENPPGGTLTRL 80
           L+ LT NG   V  KP E PPG   ++L
Sbjct: 84  LWELTLNGGPLVRSKPSEPPPGDRTSQL 111


>AF454915-1|AAL51048.1|  172|Homo sapiens C21orf61 long form
           protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 163 LYRLTANGCGSVYHKPEENPPGGTLTRL 80
           L+ LT NG   V  KP E PPG   ++L
Sbjct: 143 LWELTLNGGPLVRSKPSEPPPGDRTSQL 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,249,272
Number of Sequences: 237096
Number of extensions: 552473
Number of successful extensions: 810
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)