Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f07
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3255|AAF49088.1|  168|Drosophila melanogaster CG14182-P...   209   3e-54

>AE014296-3255|AAF49088.1|  168|Drosophila melanogaster CG14182-PA
           protein.
          Length = 168

 Score =  209 bits (510), Expect = 3e-54
 Identities = 90/134 (67%), Positives = 107/134 (79%)
 Frame = +3

Query: 69  SGDTRLGLMWSCMTLYNRPQVCFTPDLQPEWXXXXXXXXXXXXXXXXXXXXXASSHFDRN 248
           +GD RLGLMW+CMTLYNRPQVC+TP+LQPEW                     ASS  +RN
Sbjct: 35  TGDIRLGLMWTCMTLYNRPQVCYTPELQPEWLIALICIFVGCICVTTTVILLASSSCNRN 94

Query: 249 VVPYARWVGFAAMVVFCLAAVIFPMGFHVDEIGGQPYQLPNSHQVGISYILFVLSLWITV 428
           V+PYARWVGF AMV+FC+AAV+FP+GFHV+EIGGQ YQLPN+ ++GISYI+FVL+LWITV
Sbjct: 95  VIPYARWVGFTAMVLFCMAAVVFPLGFHVEEIGGQAYQLPNTFKIGISYIMFVLALWITV 154

Query: 429 ISELFAGKVCLPHF 470
           +SELFAGKVCLPHF
Sbjct: 155 VSELFAGKVCLPHF 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,519,538
Number of Sequences: 53049
Number of extensions: 561030
Number of successful extensions: 1004
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)