Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f05
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    31   0.67 
AC024814-2|AAK68521.2|  259|Caenorhabditis elegans Hypothetical ...    31   0.88 
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U40955-6|AAA81754.1|  539|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
 Frame = +2

Query: 119 YQPIQGRTSNTFPVMAQFPT--YRNFIPKETNQPLLHIANGPNTNSNAMPENRQTSGN 286
           Y    GR S   P     PT    + I +    PLLH    P  N N+ P   QTS N
Sbjct: 51  YLTDSGRNSPALPAPHPAPTTSLSSTIVRNMTAPLLHQNQKPPKNLNSRPSTPQTSSN 108


>AC024814-2|AAK68521.2|  259|Caenorhabditis elegans Hypothetical
           protein Y54F10AR.1 protein.
          Length = 259

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 130 YRLITHIHLKWIACHAIYQFY*HTQQHNLTEQFHFSLY 17
           Y+L+T ++ KW     I + Y HTQ   L  +FH  ++
Sbjct: 184 YKLVT-VYFKWFGFQKIVENYAHTQYPRLFSKFHREVF 220


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 143 SNTFPVMAQFPTYRNFIPKETNQPLLHIANGPNTNSNAMPENRQTSGN 286
           S   P  A   +  + I +    PLLH    P  N N+ P   QTS N
Sbjct: 79  STPTPTAAPTTSLSSTIVRNMTAPLLHQNQKPPKNLNSRPSTPQTSSN 126


>Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical
           protein F17B5.2 protein.
          Length = 919

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 472 FSHTENLFIEARPYRTSKTCYLKSDKQSERLAWFYIGII 588
           F+HT +L +E + Y    + Y+  +K  ++L + Y G+I
Sbjct: 142 FTHTWSLSVEIQFYLIVPSIYIIGNKIPQKLQYGYYGVI 180


>U40955-6|AAA81754.1|  539|Caenorhabditis elegans Hypothetical
           protein F48B9.1 protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 98  PFQVNMGYQPIQGRTSNTFPVMAQFPTYRNFIPKETNQPLLH-IANGPNTNSNAMPENRQ 274
           P   N+  +  +G +    P  +     ++   K+TNQ +L   A+ PN NS  +  NR+
Sbjct: 394 PIVSNLKLRLSEGLSETVSPAASPIVKTKSRKEKKTNQQMLKGSASSPNMNSQNLIINRK 453

Query: 275 TS 280
           T+
Sbjct: 454 TT 455


>U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical
           protein F40B5.2b protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 309 WIHGTIT--FWMIVNSFARRLVEMNKRIHIQTHLHTATRLDIIMDLRSRQPIH 461
           ++HG +T  FW + N     L  +NK I +          D +  LRS  P H
Sbjct: 281 YMHGNVTEWFWFLENCNITVLHNLNKHITVNGQKLCVAGADDLYALRSNVPGH 333


>U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical
           protein F40B5.2a protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +3

Query: 309 WIHGTIT--FWMIVNSFARRLVEMNKRIHIQTHLHTATRLDIIMDLRSRQPIH 461
           ++HG +T  FW + N     L  +NK I +          D +  LRS  P H
Sbjct: 308 YMHGNVTEWFWFLENCNITVLHNLNKHITVNGQKLCVAGADDLYALRSNVPGH 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,888,465
Number of Sequences: 27780
Number of extensions: 315472
Number of successful extensions: 1047
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)