BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f05 (625 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 26 0.34 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.60 AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 24 1.0 DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 24 1.4 DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 24 1.4 DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 24 1.4 U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.6 DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 7.4 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.4 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 25.8 bits (54), Expect = 0.34 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = +2 Query: 137 RTSNTFPVMAQFPTYRNFIPKETNQPLLHIANGPNTNS 250 RT + + +Y N+I KET L I+ P +N+ Sbjct: 443 RTIENEQLNRMYKSYPNYIDKETKDMNLEISTRPKSNT 480 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 25.0 bits (52), Expect = 0.60 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = -2 Query: 618 NWRPCGTVPDNNANIKPSKPFT 553 N RP GT DN +KP KPFT Sbjct: 1114 NIRP-GTA-DNKPQLKPQKPFT 1133 >AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1 protein. Length = 500 Score = 24.2 bits (50), Expect = 1.0 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -3 Query: 413 SRMQVGLDMDTFVHLDQPPRETV--HDHPESDRPMYPKSRQRSARCHLFA 270 S+ V D H + P + V +D+ D P Y SR++ ++ HL + Sbjct: 303 SQNSVSTGSDKENHKTEEPNDEVATYDNTPRDFPYYMYSREQYSQSHLIS 352 >DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase isoform B protein. Length = 931 Score = 23.8 bits (49), Expect = 1.4 Identities = 11/43 (25%), Positives = 21/43 (48%) Frame = -1 Query: 436 SIIMSRRVAVCRWVWIWIRLFISTSRRAKLFTIIQKVIVPCIQ 308 ++I + + VC +W WIRL + L ++ +V +Q Sbjct: 45 TLISNDILPVCNGLWRWIRLTYGQTNHISLTLDLEYELVENLQ 87 >DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase isoform A protein. Length = 969 Score = 23.8 bits (49), Expect = 1.4 Identities = 11/43 (25%), Positives = 21/43 (48%) Frame = -1 Query: 436 SIIMSRRVAVCRWVWIWIRLFISTSRRAKLFTIIQKVIVPCIQ 308 ++I + + VC +W WIRL + L ++ +V +Q Sbjct: 83 TLISNDILPVCNGLWRWIRLTYGQTNHISLTLDLEYELVENLQ 125 >DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein protein. Length = 484 Score = 23.8 bits (49), Expect = 1.4 Identities = 7/18 (38%), Positives = 15/18 (83%) Frame = +2 Query: 542 VISKVNGLLGFILALLSG 595 ++S++NG+LG ++A+ G Sbjct: 285 ILSQINGILGSLVAITGG 302 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 21.8 bits (44), Expect = 5.6 Identities = 9/27 (33%), Positives = 17/27 (62%) Frame = +2 Query: 521 VRPVTSKVISKVNGLLGFILALLSGTV 601 + P+ ++ V G+LGF+ A+ +G V Sbjct: 47 LNPMWHGILGFVIGMLGFVSAMGNGMV 73 >DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride channel protein. Length = 383 Score = 21.4 bits (43), Expect = 7.4 Identities = 8/26 (30%), Positives = 13/26 (50%) Frame = -1 Query: 457 IGCRLRRSIIMSRRVAVCRWVWIWIR 380 +G L + I S + V W+ WI+ Sbjct: 213 LGYHLFHTYIPSALIVVMSWIAFWIK 238 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.4 bits (43), Expect = 7.4 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = +3 Query: 429 IMDLRSRQPIHIQR 470 ++DLR Q +H+QR Sbjct: 233 LLDLRQLQELHLQR 246 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 190,320 Number of Sequences: 438 Number of extensions: 4188 Number of successful extensions: 13 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18582456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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