BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f04 (621 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 25 0.68 DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory pro... 22 3.6 AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 3.6 AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 22 3.6 AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 22 3.6 DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 6.3 AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 8.3 >AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. Length = 556 Score = 24.6 bits (51), Expect = 0.68 Identities = 7/16 (43%), Positives = 13/16 (81%) Frame = +1 Query: 343 LKEVVQALESDPDFRE 390 + +V++ +E+DPDF E Sbjct: 22 ISDVIEVIETDPDFHE 37 >DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory protein 13 protein. Length = 124 Score = 22.2 bits (45), Expect = 3.6 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +1 Query: 34 ECQLTFNKCTGSSVKLKNSI 93 EC L KCT S +LK I Sbjct: 43 ECLLGTGKCTPSGEELKKDI 62 >AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor candidate 53 protein. Length = 659 Score = 22.2 bits (45), Expect = 3.6 Identities = 7/25 (28%), Positives = 17/25 (68%) Frame = +1 Query: 409 EEDVKSGKIAEQLDFVNHNVRTRLD 483 EE K+G++ ++D +H++R ++ Sbjct: 585 EEANKAGELIHKIDTEDHDIRDEIE 609 >AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor candidate 24 protein. Length = 384 Score = 22.2 bits (45), Expect = 3.6 Identities = 7/25 (28%), Positives = 17/25 (68%) Frame = +1 Query: 409 EEDVKSGKIAEQLDFVNHNVRTRLD 483 EE K+G++ ++D +H++R ++ Sbjct: 310 EEANKAGELIHKIDTEDHDIRDEIE 334 >AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix transcription factor protein. Length = 249 Score = 22.2 bits (45), Expect = 3.6 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +1 Query: 352 VVQALESDPDFRERLEKAD 408 ++ A++ DP +LEKAD Sbjct: 61 ILDAMKKDPARHSKLEKAD 79 >DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory protein 15 protein. Length = 146 Score = 21.4 bits (43), Expect = 6.3 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +1 Query: 34 ECQLTFNKCTGSSVKLKNSI 93 +C L KCT + KLK I Sbjct: 43 DCVLDKGKCTKEAEKLKKGI 62 >AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor candidate 19 protein. Length = 355 Score = 21.0 bits (42), Expect = 8.3 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -3 Query: 118 VLFCCPVIIYYFSISLNSQYTY 53 +LF CP II+ L + Y Y Sbjct: 83 LLFYCPFIIFTVHFLLCTYYFY 104 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 134,449 Number of Sequences: 336 Number of extensions: 2623 Number of successful extensions: 13 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 15875032 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -