Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f04
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 33 0.18
11_01_0791 + 6627961-6630702 30 1.3
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 30 1.7
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 30 1.7
03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413... 30 1.7
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 29 2.3
11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483... 29 3.0
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 3.0
03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574 29 3.9
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 28 5.2
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 28 5.2
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 28 5.2
12_01_0610 + 5030130-5030247,5030957-5033193 28 6.9
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 28 6.9
08_02_0316 + 15690452-15690555,15690871-15690965,15693707-156937... 28 6.9
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 6.9
02_04_0209 - 20942021-20942181,20942354-20942420,20942651-209427... 28 6.9
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 27 9.1
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 9.1
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 27 9.1
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 27 9.1
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 27 9.1
02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883... 27 9.1
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Frame = +1
Query: 262 APPVTPDKSE-----DSEIKDDLEEYMEYHRYLKEV--VQALESDPDFRERLEKADEED 417
A V PDKSE D E ++ EE +EY +E+ + +E D D E +E+ DEE+
Sbjct: 419 ANSVEPDKSEECLEFDDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEE 477
>11_01_0791 + 6627961-6630702
Length = 913
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 214 LLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALES 372
+ V+ C I+ L P+ P + E SE K+DL M H KE+ + E+
Sbjct: 226 ITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTEN 278
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 271 VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLD 450
+ P+ D EI + EY R K+ + S+ D RLE+ D+E+ + ++ D
Sbjct: 537 IDPNFDSDDEIMGEAVYDEEYLRTRKQQKTSSASEEDEEFRLEEDDDEEEEEYSLSTSED 596
Query: 451 FVNHNVRTRLDEIKRR 498
R +L RR
Sbjct: 597 LEEPQQRKKLQTRGRR 612
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 461 WLTKSSCSAIFPDLTSSSSAFSNRSLKSGSLSNAC 357
WLT C+ +FPD +S S S GS+ NAC
Sbjct: 1373 WLTHCHCT-LFPDGNNSDSLLSALLKIRGSMDNAC 1406
>03_01_0555 +
4132630-4132923,4133514-4133771,4134125-4134249,
4134789-4134990,4135172-4135297,4135404-4135660,
4135968-4136075,4136142-4136310,4136378-4136543,
4136967-4136998,4137256-4137579,4137683-4137757,
4138093-4138162,4138228-4138385,4138872-4139021
Length = 837
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459
D + + D L++ E + + + D D R LE+ADE+D +G E V
Sbjct: 85 DHAWSFRLSDALKQLREVPGLAERMAALMCVDLDERTELEEADEQDNGNGGSLESALEVV 144
Query: 460 HNVRTRLDE 486
RTR+ E
Sbjct: 145 EKERTRIQE 153
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/106 (23%), Positives = 50/106 (47%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459
DK E + + + + +E+ + +E + L D E L +++ K E L
Sbjct: 820 DKVERQQAEMETQR-LEFKQKQQEAQRKLSEAQDDSEVLRRSNS---KLQSTVESLIEEC 875
Query: 460 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLD 597
+++ ++ E+KR++LE HL ++ EL N N+ + E L+
Sbjct: 876 SSLQNQIAELKRQKLELHGHLTQQEQELDNSKKRNLDFCKTVEFLE 921
>11_04_0450 -
17847676-17847841,17848024-17848131,17848223-17848377,
17848471-17848560,17848650-17848748,17848862-17848928,
17849028-17849124,17849357-17849492,17849579-17849634,
17849718-17849801,17849909-17850125
Length = 424
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459
D S+ SE++ LEEY+ L LES +FR R DEE S E L ++
Sbjct: 76 DVSDVSELQHALEEYLPVVLGLTMKESRLESSVEFRWRTLDDDEECCLSSAWYEVLSVIH 135
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 29.1 bits (62), Expect = 3.0
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +1
Query: 289 EDSE--IKDDLEEYMEYHRYLKEVVQALESDPDF-RERLEKADEEDVKSGKIAEQLDFVN 459
EDS + DLEE + L + A++++ +F + LEK + + + A Q +FV
Sbjct: 1525 EDSSEMLISDLEESHKRISELSAEIVAVKAEKEFFSQSLEKLRFDFLGLSEKAVQDEFVR 1584
Query: 460 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 576
N+R L E++ + E+ T++ +L +D+ + + K+
Sbjct: 1585 DNLRKDLAELQEKLAEK-----TEESKLYHDMEMEIKKL 1618
>03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574
Length = 602
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +1
Query: 292 DSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 462
D EI+D D++ + ++L++ + SD F+E K +EE+ K E+ +
Sbjct: 247 DKEIEDVNADIKAHEVCLQHLEQESYNVLSDAGFQEEKLKIEEEEKKLNAAIEEAEKQYS 306
Query: 463 NVRTRLD--EIKRRELERLRHLATKQF 537
+ + + EIK +E E L +F
Sbjct: 307 EISSEMKDLEIKSKEFEELEERYWHEF 333
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 343 LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVR--TRLDEIKRRELERLR 516
L E E + RE LEK EE+ K + A+ + + + R E++R + ER
Sbjct: 108 LVEAQHKAERERKEREELEKKLEEERKKAEEAQMKEAMEQQQKELERYQELERLQKEREE 167
Query: 517 HLATKQFE 540
+ KQ E
Sbjct: 168 AMKRKQME 175
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 268 PVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDP-DFRERLEKADEED 417
P P +S++ ++DLE+Y Y+ + SD D E LE D ED
Sbjct: 494 PPPPTESDEERFREDLEQYYN-DGYVSTPCPSPPSDLFDCEENLEDGDVED 543
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 379 DFRERLEKAD-EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLA 525
DFRER+ K + ++D K G + ++ ++ + D K+R +ER R +A
Sbjct: 402 DFRERILKENLKDDRKKGSLT-RMGSISSEQADKGDPTKKRRVERSRKMA 450
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 235 MIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 360
++V HCS +PP PD EY Y RY K VVQ
Sbjct: 281 VLVMTHCSSSPPEGPDGYP--------LEYDSYARYCKNVVQ 314
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 256 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 420
S PP T KS D+E K + EE E L+E+ D D E E+ ++E++
Sbjct: 104 SQPPPRTESKSADAEEKSEEEEDGEGDEELEEL-----DDVDDEEESEEEEKEEL 153
>08_02_0316 +
15690452-15690555,15690871-15690965,15693707-15693783,
15693854-15693908,15695158-15695227,15695388-15695457,
15696047-15696340
Length = 254
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 274 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 360
TPD E E+K+ L ME R L E V+
Sbjct: 129 TPDLKESQELKEALRAQMEVQRKLHEQVE 157
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 27.9 bits (59), Expect = 6.9
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALES------DPDFRERLEKADEEDVKSGKIAE 441
D ED+E + + YHR+ + +Q LE+ PD ++R E + + A
Sbjct: 254 DDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLD----AR 309
Query: 442 QLDFVNHNVRTRLDEIKRRELERLRHLATKQ 534
Q+ F N RT++ + +LER + KQ
Sbjct: 310 QVKFWFQNRRTQM----KTQLERHENALLKQ 336
>02_04_0209 -
20942021-20942181,20942354-20942420,20942651-20942743,
20943026-20943119,20943690-20943762,20943865-20943973,
20944564-20944663,20945389-20945487,20945571-20945641,
20946067-20946144,20946317-20946403,20946538-20946636
Length = 376
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 102 GQQNSTYSKIIQSISNENCHYLHVDLVVLAKLTHQYEALS--YNRLYD 239
G+ + Y+K I+ I +E+ Y+H D + H +E LS YN++ D
Sbjct: 93 GRLHDRYAKSIEPILSEDIRYVHFDFHRICGHIH-FERLSQLYNQIED 139
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 265 PPVTPDKSEDSEIKDDLEEY 324
P V PD S DS++ D+ EEY
Sbjct: 28 PTVPPDGSSDSDVGDEDEEY 47
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 256 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSG 429
S PP T KS D+E K + EE E +E+ + + D + E+ +EE+ K G
Sbjct: 104 SQPPPRTESKSADAEEKSE-EEDEEDGEGDEELEELDDVDDEEESEEEEEEEEEDKEG 160
>10_08_0731 + 20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 358 QALESDPDFRERLEKADEEDVKSGK 432
QA+E+D +F R+ DEED S K
Sbjct: 1674 QAMEADKEFYSRIRIPDEEDSSSQK 1698
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 420
A P T D + + E+ + E EY E ++ D + RE+L K+ ++++
Sbjct: 649 AEPQTSDATSEPEVSES-EGDDEYEWEQLETLRKTRPDKELREKLAKSSQKEI 700
>03_05_0567 -
25672780-25672965,25673043-25673135,25673237-25673297,
25673385-25673495,25673640-25673825,25673909-25675287,
25675393-25675776,25675813-25676061,25676147-25676386
Length = 962
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 265 PPVTPDKSEDSEIKDDLEEY 324
P V PD S DS++ D+ EEY
Sbjct: 28 PTVPPDGSSDSDVGDEDEEY 47
>02_05_0415 +
28787353-28787496,28787658-28788204,28788297-28788392,
28788532-28788645,28788929-28789962,28790053-28790124
Length = 668
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEED 417
A T +S S++ DLE+ +E + V+ E DP EK DEE+
Sbjct: 191 ATKTTTRRSARSKVMVDLEQEVEDMAVALQEVKVQEEDPKDVASDEKCDEEE 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,429,163
Number of Sequences: 37544
Number of extensions: 252573
Number of successful extensions: 836
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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