BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f04 (621 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 33 0.18 11_01_0791 + 6627961-6630702 30 1.3 07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 30 1.7 06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 30 1.7 03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413... 30 1.7 03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 29 2.3 11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483... 29 3.0 02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 3.0 03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574 29 3.9 11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 28 5.2 06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 28 5.2 06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 28 5.2 12_01_0610 + 5030130-5030247,5030957-5033193 28 6.9 11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 28 6.9 08_02_0316 + 15690452-15690555,15690871-15690965,15693707-156937... 28 6.9 02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 6.9 02_04_0209 - 20942021-20942181,20942354-20942420,20942651-209427... 28 6.9 12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 27 9.1 12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 9.1 10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 27 9.1 10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 27 9.1 03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 27 9.1 02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883... 27 9.1 >11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116, 1816199-1816309,1816934-1817074,1817153-1817323, 1817421-1817625,1817714-1817886,1817997-1818079, 1818487-1818626,1818806-1818891,1818957-1819142, 1819172-1819365,1820387-1820736,1821153-1821235 Length = 1187 Score = 33.1 bits (72), Expect = 0.18 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Frame = +1 Query: 262 APPVTPDKSE-----DSEIKDDLEEYMEYHRYLKEV--VQALESDPDFRERLEKADEED 417 A V PDKSE D E ++ EE +EY +E+ + +E D D E +E+ DEE+ Sbjct: 419 ANSVEPDKSEECLEFDDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEE 477 >11_01_0791 + 6627961-6630702 Length = 913 Score = 30.3 bits (65), Expect = 1.3 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 214 LLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALES 372 + V+ C I+ L P+ P + E SE K+DL M H KE+ + E+ Sbjct: 226 ITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTEN 278 >07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036, 5105712-5105835,5105924-5106016,5106754-5106931, 5107032-5107138,5108098-5108179,5108277-5108314, 5108409-5108495,5109025-5109135,5109282-5109773 Length = 774 Score = 29.9 bits (64), Expect = 1.7 Identities = 20/76 (26%), Positives = 33/76 (43%) Frame = +1 Query: 271 VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLD 450 + P+ D EI + EY R K+ + S+ D RLE+ D+E+ + ++ D Sbjct: 537 IDPNFDSDDEIMGEAVYDEEYLRTRKQQKTSSASEEDEEFRLEEDDDEEEEEYSLSTSED 596 Query: 451 FVNHNVRTRLDEIKRR 498 R +L RR Sbjct: 597 LEEPQQRKKLQTRGRR 612 >06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107, 30670186-30670281,30670679-30670828,30670956-30671100, 30671178-30671251,30671325-30671445,30671697-30671821, 30671898-30672047,30672249-30672324,30672496-30672557, 30672597-30672839,30673354-30673683,30673776-30673932, 30674008-30674139,30674219-30674277,30674734-30674798, 30674878-30675094,30675413-30675499,30675655-30675750, 30675938-30676003,30676096-30676287,30676380-30676532, 30676812-30677052,30677322-30677515,30678212-30678348, 30678474-30678480,30678708-30678830,30679370-30679427, 30680018-30680090,30680493-30681765 Length = 1714 Score = 29.9 bits (64), Expect = 1.7 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -2 Query: 461 WLTKSSCSAIFPDLTSSSSAFSNRSLKSGSLSNAC 357 WLT C+ +FPD +S S S GS+ NAC Sbjct: 1373 WLTHCHCT-LFPDGNNSDSLLSALLKIRGSMDNAC 1406 >03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249, 4134789-4134990,4135172-4135297,4135404-4135660, 4135968-4136075,4136142-4136310,4136378-4136543, 4136967-4136998,4137256-4137579,4137683-4137757, 4138093-4138162,4138228-4138385,4138872-4139021 Length = 837 Score = 29.9 bits (64), Expect = 1.7 Identities = 20/69 (28%), Positives = 31/69 (44%) Frame = +1 Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459 D + + D L++ E + + + D D R LE+ADE+D +G E V Sbjct: 85 DHAWSFRLSDALKQLREVPGLAERMAALMCVDLDERTELEEADEQDNGNGGSLESALEVV 144 Query: 460 HNVRTRLDE 486 RTR+ E Sbjct: 145 EKERTRIQE 153 >03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209, 420334-420502,421115-424273,424367-424485,424915-425116 Length = 1363 Score = 29.5 bits (63), Expect = 2.3 Identities = 25/106 (23%), Positives = 50/106 (47%) Frame = +1 Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459 DK E + + + + +E+ + +E + L D E L +++ K E L Sbjct: 820 DKVERQQAEMETQR-LEFKQKQQEAQRKLSEAQDDSEVLRRSNS---KLQSTVESLIEEC 875 Query: 460 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLD 597 +++ ++ E+KR++LE HL ++ EL N N+ + E L+ Sbjct: 876 SSLQNQIAELKRQKLELHGHLTQQEQELDNSKKRNLDFCKTVEFLE 921 >11_04_0450 - 17847676-17847841,17848024-17848131,17848223-17848377, 17848471-17848560,17848650-17848748,17848862-17848928, 17849028-17849124,17849357-17849492,17849579-17849634, 17849718-17849801,17849909-17850125 Length = 424 Score = 29.1 bits (62), Expect = 3.0 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = +1 Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459 D S+ SE++ LEEY+ L LES +FR R DEE S E L ++ Sbjct: 76 DVSDVSELQHALEEYLPVVLGLTMKESRLESSVEFRWRTLDDDEECCLSSAWYEVLSVIH 135 >02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425, 2657523-2657649,2657731-2657812,2658172-2658196 Length = 2621 Score = 29.1 bits (62), Expect = 3.0 Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Frame = +1 Query: 289 EDSE--IKDDLEEYMEYHRYLKEVVQALESDPDF-RERLEKADEEDVKSGKIAEQLDFVN 459 EDS + DLEE + L + A++++ +F + LEK + + + A Q +FV Sbjct: 1525 EDSSEMLISDLEESHKRISELSAEIVAVKAEKEFFSQSLEKLRFDFLGLSEKAVQDEFVR 1584 Query: 460 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 576 N+R L E++ + E+ T++ +L +D+ + + K+ Sbjct: 1585 DNLRKDLAELQEKLAEK-----TEESKLYHDMEMEIKKL 1618 >03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574 Length = 602 Score = 28.7 bits (61), Expect = 3.9 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Frame = +1 Query: 292 DSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 462 D EI+D D++ + ++L++ + SD F+E K +EE+ K E+ + Sbjct: 247 DKEIEDVNADIKAHEVCLQHLEQESYNVLSDAGFQEEKLKIEEEEKKLNAAIEEAEKQYS 306 Query: 463 NVRTRLD--EIKRRELERLRHLATKQF 537 + + + EIK +E E L +F Sbjct: 307 EISSEMKDLEIKSKEFEELEERYWHEF 333 >11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 Length = 203 Score = 28.3 bits (60), Expect = 5.2 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = +1 Query: 343 LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVR--TRLDEIKRRELERLR 516 L E E + RE LEK EE+ K + A+ + + + R E++R + ER Sbjct: 108 LVEAQHKAERERKEREELEKKLEEERKKAEEAQMKEAMEQQQKELERYQELERLQKEREE 167 Query: 517 HLATKQFE 540 + KQ E Sbjct: 168 AMKRKQME 175 >06_02_0345 + 14833838-14833997,14834095-14834552,14834633-14834870, 14834974-14835431,14836554-14836955 Length = 571 Score = 28.3 bits (60), Expect = 5.2 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +1 Query: 268 PVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDP-DFRERLEKADEED 417 P P +S++ ++DLE+Y Y+ + SD D E LE D ED Sbjct: 494 PPPPTESDEERFREDLEQYYN-DGYVSTPCPSPPSDLFDCEENLEDGDVED 543 >06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-872848, 872997-873043,873124-873169,873371-873416,873592-873720, 873822-873942 Length = 530 Score = 28.3 bits (60), Expect = 5.2 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +1 Query: 379 DFRERLEKAD-EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLA 525 DFRER+ K + ++D K G + ++ ++ + D K+R +ER R +A Sbjct: 402 DFRERILKENLKDDRKKGSLT-RMGSISSEQADKGDPTKKRRVERSRKMA 450 >12_01_0610 + 5030130-5030247,5030957-5033193 Length = 784 Score = 27.9 bits (59), Expect = 6.9 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 Query: 235 MIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 360 ++V HCS +PP PD EY Y RY K VVQ Sbjct: 281 VLVMTHCSSSPPEGPDGYP--------LEYDSYARYCKNVVQ 314 >11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752, 1710838-1710909,1711631-1711699,1711807-1711848, 1711946-1712014,1712130-1712267,1712390-1712500, 1712576-1712726,1713720-1713775,1714076-1714753 Length = 540 Score = 27.9 bits (59), Expect = 6.9 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +1 Query: 256 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 420 S PP T KS D+E K + EE E L+E+ D D E E+ ++E++ Sbjct: 104 SQPPPRTESKSADAEEKSEEEEDGEGDEELEEL-----DDVDDEEESEEEEKEEL 153 >08_02_0316 + 15690452-15690555,15690871-15690965,15693707-15693783, 15693854-15693908,15695158-15695227,15695388-15695457, 15696047-15696340 Length = 254 Score = 27.9 bits (59), Expect = 6.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 274 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 360 TPD E E+K+ L ME R L E V+ Sbjct: 129 TPDLKESQELKEALRAQMEVQRKLHEQVE 157 >02_05_0286 - 27506925-27507278,27508439-27508812,27509041-27509218, 27510878-27511105,27511215-27511316,27511415-27512131, 27512270-27512387,27512500-27512744,27512854-27513054, 27513920-27514324 Length = 973 Score = 27.9 bits (59), Expect = 6.9 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = +1 Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALES------DPDFRERLEKADEEDVKSGKIAE 441 D ED+E + + YHR+ + +Q LE+ PD ++R E + + A Sbjct: 254 DDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLD----AR 309 Query: 442 QLDFVNHNVRTRLDEIKRRELERLRHLATKQ 534 Q+ F N RT++ + +LER + KQ Sbjct: 310 QVKFWFQNRRTQM----KTQLERHENALLKQ 336 >02_04_0209 - 20942021-20942181,20942354-20942420,20942651-20942743, 20943026-20943119,20943690-20943762,20943865-20943973, 20944564-20944663,20945389-20945487,20945571-20945641, 20946067-20946144,20946317-20946403,20946538-20946636 Length = 376 Score = 27.9 bits (59), Expect = 6.9 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = +3 Query: 102 GQQNSTYSKIIQSISNENCHYLHVDLVVLAKLTHQYEALS--YNRLYD 239 G+ + Y+K I+ I +E+ Y+H D + H +E LS YN++ D Sbjct: 93 GRLHDRYAKSIEPILSEDIRYVHFDFHRICGHIH-FERLSQLYNQIED 139 >12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615, 5241703-5241813,5241960-5242145,5242229-5242590, 5242730-5243152,5243159-5244382,5244468-5244707 Length = 961 Score = 27.5 bits (58), Expect = 9.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 265 PPVTPDKSEDSEIKDDLEEY 324 P V PD S DS++ D+ EEY Sbjct: 28 PTVPPDGSSDSDVGDEDEEY 47 >12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267, 1658362-1658447,1658559-1658808,1659194-1660320, 1662207-1662351,1663555-1663696,1663775-1663828, 1663914-1663985,1664710-1664778,1664885-1664926, 1665024-1665092,1665257-1665394,1665518-1665628, 1665704-1665836,1666834-1666889,1667191-1667901 Length = 1198 Score = 27.5 bits (58), Expect = 9.1 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +1 Query: 256 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSG 429 S PP T KS D+E K + EE E +E+ + + D + E+ +EE+ K G Sbjct: 104 SQPPPRTESKSADAEEKSE-EEDEEDGEGDEELEELDDVDDEEESEEEEEEEEEDKEG 160 >10_08_0731 + 20161962-20163628,20163721-20163862,20164181-20164490, 20164566-20166466,20166557-20166650,20166953-20167440, 20167919-20168599,20168870-20168944,20170148-20170210, 20170588-20170633,20171373-20171420,20171484-20171557 Length = 1862 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 358 QALESDPDFRERLEKADEEDVKSGK 432 QA+E+D +F R+ DEED S K Sbjct: 1674 QAMEADKEFYSRIRIPDEEDSSSQK 1698 >10_08_0472 - 18154797-18155048,18155332-18156318,18156424-18156546, 18156654-18156808,18157611-18157824,18158977-18159077, 18159162-18159285,18159584-18159655,18159897-18159961, 18160167-18160233,18160917-18161015,18161099-18161167, 18161286-18161409,18162507-18162566,18163111-18163634 Length = 1011 Score = 27.5 bits (58), Expect = 9.1 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 420 A P T D + + E+ + E EY E ++ D + RE+L K+ ++++ Sbjct: 649 AEPQTSDATSEPEVSES-EGDDEYEWEQLETLRKTRPDKELREKLAKSSQKEI 700 >03_05_0567 - 25672780-25672965,25673043-25673135,25673237-25673297, 25673385-25673495,25673640-25673825,25673909-25675287, 25675393-25675776,25675813-25676061,25676147-25676386 Length = 962 Score = 27.5 bits (58), Expect = 9.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 265 PPVTPDKSEDSEIKDDLEEY 324 P V PD S DS++ D+ EEY Sbjct: 28 PTVPPDGSSDSDVGDEDEEY 47 >02_05_0415 + 28787353-28787496,28787658-28788204,28788297-28788392, 28788532-28788645,28788929-28789962,28790053-28790124 Length = 668 Score = 27.5 bits (58), Expect = 9.1 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +1 Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEED 417 A T +S S++ DLE+ +E + V+ E DP EK DEE+ Sbjct: 191 ATKTTTRRSARSKVMVDLEQEVEDMAVALQEVKVQEEDPKDVASDEKCDEEE 242 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,429,163 Number of Sequences: 37544 Number of extensions: 252573 Number of successful extensions: 836 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 810 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 836 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1502076244 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -