Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f04
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 38 0.009
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 34 0.11
SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4) 32 0.33
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 32 0.43
SB_23812| Best HMM Match : Filament (HMM E-Value=0.05) 31 0.57
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 31 1.00
SB_16650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83) 30 1.3
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_44237| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 2.3
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_6346| Best HMM Match : Ion_trans (HMM E-Value=0.018) 29 3.0
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 29 4.0
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_45874| Best HMM Match : TIR (HMM E-Value=0.43) 28 5.3
SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_31459| Best HMM Match : ASC (HMM E-Value=2.8e-09) 28 5.3
SB_25961| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11388| Best HMM Match : MFS_1 (HMM E-Value=0.0022) 28 5.3
SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24) 28 7.0
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 28 7.0
SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_33687| Best HMM Match : Filament (HMM E-Value=0.1) 28 7.0
SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30) 28 7.0
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 7.0
SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21) 28 7.0
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 28 7.0
SB_2616| Best HMM Match : Na_trans_assoc (HMM E-Value=2.6) 28 7.0
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 27 9.3
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 27 9.3
SB_14697| Best HMM Match : Psf2 (HMM E-Value=8.7e-08) 27 9.3
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_3121| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/76 (43%), Positives = 55/76 (72%)
Frame = +1
Query: 328 EYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELE 507
EY RYL++V++ LE D D+ +L A ++D++SG+IAE +D V H+VR++LDE+KR+E+E
Sbjct: 875 EYARYLRQVIEILEKDEDYVRKLMNASDDDLRSGRIAEDIDLVKHDVRSKLDELKRQEVE 934
Query: 508 RLRHLATKQFELTNDL 555
R R + + + N +
Sbjct: 935 RQRMIRRQMNDHLNGI 950
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +1
Query: 274 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDF 453
TPD+ +D ++D + E H++ +E + ++ + DF ++ EK ++ K + EQL++
Sbjct: 744 TPDQEQDKPVEDQKKPDRELHKHDQEQDKQVKDENDFDQKQEKPHQKHDK--PVQEQLNY 801
Query: 454 VNHNVRTRLDEIKRRELERLR---HLATKQFELTNDLHVNMGKVPSSEHLD 597
+ + + + K L+ R +Q E + H N G P D
Sbjct: 802 SSTDKKEATPDHKEANLDETRITVKPGQEQNEANQEYH-NRGSDPQESISD 851
>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
Length = 762
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 289 EDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNV 468
E S+++ L + LK ++LE + + D+ + K + EQL+ +N N+
Sbjct: 528 ERSQLRKRLSDLEGLMATLKNEKESLEHE--LGSARGRIDDLETKKNLLTEQLEILNENL 585
Query: 469 RTRLDEI--KRRELERLRHLATKQFELTNDLHVNMGKVPSSEHL 594
++ E+ + ELE L+ +A + + + L G + E+L
Sbjct: 586 NLKIQELGMAQTELETLQSVANAKGGVDDALKETKGLIEEEENL 629
>SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQA-LES-----DPDFRERLEKADEEDVKSGKIAEQ 444
K+E ++LEE + HR+ K+++QA LES D R++LE +E + +Q
Sbjct: 94 KAEHMNKVEELEEQVSDHRHAKQMIQARLESQLRLQQEDSRKKLENMRQELNSIMRRQQQ 153
Query: 445 LDFVNHNVRTRLDEIKRRELERLRHLATKQF 537
L+ N ++ + ++ R LE L L+ +++
Sbjct: 154 LETDNVGLQEKAGDL-RSSLENLELLSGERY 183
>SB_35530| Best HMM Match : Pinin_SDK_memA (HMM E-Value=2.4)
Length = 170
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/99 (22%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEED-VKSGKIAEQLDFVN 459
K ++ + ++E+ + L + Q+L F ++++ E+D + +GK E+LD VN
Sbjct: 10 KKISADFRRRMKEHKTRPKALAALNQSLNLSSTFLKQVKNMTEKDEIYTGKDLEELDKVN 69
Query: 460 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 576
+ + L+++ +++ + H A LT D+ K+
Sbjct: 70 NETKEWLEKMTKKQDDTEPHEA--PVLLTRDIEHKQNKI 106
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 286 SEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHN 465
+E+ IK D+ E +E LKE ++ + DE D SGK E+LDFV H
Sbjct: 187 AEEILIKGDVSEIIELRNALKEQLEEVVQ--------LNLDESDEVSGKFVEELDFVIHR 238
Query: 466 VRT 474
T
Sbjct: 239 NAT 241
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 32.3 bits (70), Expect = 0.33
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +1
Query: 271 VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLE-KADEEDV-KSGKIAEQ 444
V KSE IK+++E+Y + ++E E F E L+ KAD + + +SGK E
Sbjct: 1259 VPAKKSEAENIKENIEKYNSAFQPVREAFTQAEDLLSFSEPLDRKADVKQMNQSGK--EL 1316
Query: 445 LDFVNHNV---RTRLDEIKRRELERLRHLATKQFELTNDL 555
+ N +V + +D ++ + R LA +Q +L L
Sbjct: 1317 MGVENQSVTGIKDEVDSANKKSKDIPRRLADRQKQLEKAL 1356
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 31.9 bits (69), Expect = 0.43
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +1
Query: 286 SEDSEIKDDLEEYMEYHRYLKEVVQAL-ESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 462
S + + D LE E + +E+ + L E + + E +KAD + + ++ E++ V +
Sbjct: 101 SLERQYNDALERTEEAEKQYEEISERLQELENELEEAEQKADAAEARVKELEEEVTLVGN 160
Query: 463 NVRT-RLDEIKRRELE-----RLRHLATK 531
N+R+ + E K E E ++R L TK
Sbjct: 161 NLRSLEISEGKASEREDTYENQIRELETK 189
>SB_23812| Best HMM Match : Filament (HMM E-Value=0.05)
Length = 307
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459
+ SE E+K DL+E +E + +LK Q LE + R ++ ++ ++ + QLD V
Sbjct: 198 ENSEQHELKRDLDEALESNSHLKGANQTLED--NLRGLEQQLEKTKGRAKSLKYQLDQVK 255
Query: 460 HNVRTRLDE 486
+ R ++
Sbjct: 256 REKKQRQED 264
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 30.7 bits (66), Expect = 1.00
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEK-ADEEDVKSGKIAEQLDFVN 459
+ E E D + E +E + KE E + R+ E A E + + KI E+
Sbjct: 313 RKEKEEALDAVREELEEEQEEKESRLRDEKEQSLRKLRESLAREHEKEKRKIEEEYHAAL 372
Query: 460 HNVRTRLDEIKRRELERLRHLATKQFEL 543
R +LD+ K E+E+L+ Q+EL
Sbjct: 373 DEQREKLDKEKDAEIEKLQQ--KNQYEL 398
>SB_16650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 259 YAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDP 378
Y PP D S+D + +D++ Y+ +++ ++ A S P
Sbjct: 74 YTPPDMMDSSQDDVMSEDIDAYLMQYQHQDPMLSAFPSPP 113
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHR---YLKEVVQALESDPDFRERLEKADEE-DVKSGKIAEQL 447
D ++ E+K ++ ++YH L+++VQ+L++ P+ + LE+ E ++ ++A Q
Sbjct: 569 DLEKELELKTSEKQNVDYHEKIAELEKLVQSLDARPNNTKELEEYKAECEILQDEVA-QY 627
Query: 448 DFVNHNVRTRLDEIK 492
++ R RLDE K
Sbjct: 628 RRLSDEDRHRLDEYK 642
>SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83)
Length = 333
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 373 DPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRT-RLDEIKR-RELERLRHLATKQFELT 546
D D +L + +E +V+ + E++ + + V T +L+++KR RE+ERL L K +
Sbjct: 62 DLDMWRKLREFEEREVE---LKEEIFELENQVETLKLEKLKRDREIERLEALLRKSAKEN 118
Query: 547 NDLHVN 564
N L +N
Sbjct: 119 NRLFMN 124
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 373 DPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHL 522
D + + +EK EE+ K K E+L+ H R EI+RRE E+++ +
Sbjct: 156 DRERKRIIEKEKEEEEKKRKEEEELERRKHQERM---EIQRREAEKVKQM 202
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 346 KEVVQALESDPDFRE-RLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHL 522
K+ V+ +E D + ++ K D ED+K+ +A L + E+++ E+E+L
Sbjct: 457 KKAVKEIEKDEELKDVESLKKDREDLKNECLA--LSETVTKIANEKREMEK-EIEKLEEE 513
Query: 523 ATKQFELTNDLHVNMGKVPS--SEHLDHTNAHT 615
K ND VN+ K+ S E + NAH+
Sbjct: 514 NKKLVSEINDFKVNIQKLESLKGEKEELDNAHS 546
>SB_44237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 PDFRERLEKADEEDVKSG-KIAEQLDFVNHNVRTRLDEIKRRELERLRHL 522
P + + K +E + SG ++ + ++ +V T LDE KRR +ER +H+
Sbjct: 6 PQGKHQASKCLQECMISGQRLRQAIENPAKSVNTLLDEEKRRNIERNKHI 55
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAE 441
APP + D ++ + EE M Y +K+ VQ L+ + ++R E+ E K+ + E
Sbjct: 2181 APPQEFETWRDDTLEKEREEAMSYDERIKK-VQKLDVNKIIQQRQEEERESQRKARLLEE 2239
Query: 442 QLDFVNHNVRTRLD-EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTF 618
Q R E++ R+ R ++ + + ++V+ K + LD + F
Sbjct: 2240 QRLLEERAEMERAKRELEERKAARYHEPQEEEEDEEDAVNVSPEKPQNVRKLDLSQFSKF 2299
Query: 619 E 621
+
Sbjct: 2300 Q 2300
>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQAL-ESDPDFRERLEKADEEDVKSGKIAEQLDFV 456
+++ DS++ +L + + E+ +AL E + + ++ EK EE + EQL+
Sbjct: 60 EETNDSDVYAELAQKEKDLLLAAELGKALLEKNEELSQKYEKLQEE---FSQRVEQLEQE 116
Query: 457 NHNVRTRLDEIKRRELERLRHLATKQFELTNDLH 558
H ++ RL+ I R++ L L N+L+
Sbjct: 117 KHELKLRLERIDGSHELRVQELQADIHALRNELN 150
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEV-VQALESDPDFRERLEKADEED-VKSGKIAEQLDF 453
D + +I+D LE+ ++ +L++V ++ + D RE LEK D D ++ I + L+
Sbjct: 489 DYLDKVDIRDHLEK-VDIRDHLEKVDIRDYQEKVDIREHLEKVDIRDYLEKVDIRDYLEK 547
Query: 454 VNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLD 597
V ++R L+++ R+ L + ++ D+ + KV +HL+
Sbjct: 548 V--DIREHLEKVDIRDY--LEKVDIREHLEKVDIRDYLEKVDIRDHLE 591
Score = 28.3 bits (60), Expect = 5.3
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEED-VKSGKIAEQLDFV 456
D E +I+D LE+ +K ++ DFR+ L+K D D ++ I + L+ V
Sbjct: 453 DYLEKVDIRDYLEKVDIRDHLVKVDIKDYLEKVDFRDYLDKVDIRDHLEKVDIRDHLEKV 512
Query: 457 NHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTF 618
++R +++ R E L + + + D+ + KV EHL+ + +
Sbjct: 513 --DIRDYQEKVDIR--EHLEKVDIRDYLEKVDIRDYLEKVDIREHLEKVDIRDY 562
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +1
Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAE 441
+P V E +K +++ + RYLKE ++ + + R LEK EE + +
Sbjct: 529 SPHVKQSLYESESMKGKIKDLEDEVRYLKERLEDMAKEKTRRRELEKKIEE------LQD 582
Query: 442 QLDFVNHNVRTRLDEIKRRE 501
+LD +V TR +E+++++
Sbjct: 583 ELD----DVSTRRNELQKKQ 598
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHR-YLKEVVQALESDPDFRERLE-KADEEDVKSGKIAEQLDFV 456
K ++ ++KDD+ + EY++ ++E+ L + +ERL+ + +ED++ +IAE D
Sbjct: 1169 KEQEEKLKDDIRKSKEYNKEKIREMQNELFKHNEKQERLKGVSSQEDIE--RIAELTDGS 1226
Query: 457 N 459
N
Sbjct: 1227 N 1227
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRE---RLEKADEEDVKSGKIAEQLDF 453
+ E+SE +DD +E E +E + E + + E + +EE++K IAEQL+
Sbjct: 684 EGEESEQEDDDKEESESESESEESEEESEEEEESEESDSEESEEEEEEIKEKDIAEQLEE 743
Query: 454 VN 459
N
Sbjct: 744 EN 745
>SB_6346| Best HMM Match : Ion_trans (HMM E-Value=0.018)
Length = 351
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/102 (19%), Positives = 46/102 (45%)
Frame = +1
Query: 289 EDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNV 468
+D + DD + +KE ++ + S D + ++A + VKS ++LD + ++
Sbjct: 230 DDDVLDDDEGDLKRMTHQIKEELEEMHSKMDAQGSKKRAGVDGVKSDVTRDELDALRGDL 289
Query: 469 RTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHL 594
R+++ +R + + E+ D+ V + K H+
Sbjct: 290 -GRVEQQQRAMTAQFHTQIGELKEMLRDVIVKLNKPRKKRHV 330
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 EEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKR 495
E+Y E R + + + S +FR LEKA E +K K + +N + DEIK+
Sbjct: 119 EKYEEAVRDYESLCKKDRSSREFRRLLEKAKLE-LKKSKRKDYYKILNISKTASEDEIKK 177
Query: 496 R-ELERLRH 519
+ E L+H
Sbjct: 178 AYKKEALKH 186
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 EEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKR 495
E+Y E R + + + S +FR LEKA E +K K + +N + DEIK+
Sbjct: 119 EKYEEAVRDYESLCKKDRSSREFRRLLEKAKLE-LKKSKRKDYYKILNISKTASEDEIKK 177
Query: 496 R-ELERLRH 519
+ E L+H
Sbjct: 178 AYKKEALKH 186
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.7 bits (61), Expect = 4.0
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALE--SDPDFRERLEKADEEDVKSGKIAEQLDF 453
+K E++E K E+ E R K + Q L+ ++ + RER KA EE ++ + EQ+
Sbjct: 928 EKKEEAERKAKEEKERE-ERERKRICQLLKEKAEQERRERELKAREEKLRLAR--EQMMR 984
Query: 454 VNHNVRTRLDEIKRRELERLRHLATK 531
+L+ ++R ERL+ A+K
Sbjct: 985 EERERTLKLELERKRMEERLKDQASK 1010
>SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 286 SEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQ-LDFVNH 462
+ED E+++ + + H Y +E+ L + D K DE V + K+ +Q L + H
Sbjct: 505 AEDREVREIIARDLSKHPYYEEIGPRLSTRRDPNNATSKYDER-VGTVKVEQQWLGDMRH 563
Query: 463 NV 468
NV
Sbjct: 564 NV 565
>SB_45874| Best HMM Match : TIR (HMM E-Value=0.43)
Length = 876
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 57 VYWEFSEIEK*YIITGQQNSTYSKIIQSISNENCHYLHVDLVVLAKLTHQYEALSYNR 230
VYW E+ Y + N Y +IQ + + + L VD + + K T +A +Y+R
Sbjct: 498 VYWRADELSGFYRKLDETNEDYQIVIQFLLDVDAPKLLVDYIRILKQTFP-DASTYDR 554
>SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 289 EDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLD 450
ED+E ++ EE +E +EV + E + + + +E +EE+ K + E D
Sbjct: 29 EDNEQDEEEEEEVEKEEEEEEVEEEEEEEEEKEDEIEVEEEEEEKENEEEENED 82
>SB_31459| Best HMM Match : ASC (HMM E-Value=2.8e-09)
Length = 509
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 118 VLFCCPVIIYYFSISLNSQYTY 53
+LFCC + IY F IS+N Y
Sbjct: 194 LLFCCAMFIYQFVISVNRLRAY 215
>SB_25961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 406 DEEDVKSGKIAE---QLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTND 552
DE DV K+ E +LD +N LDEI+RR LE + K EL+ND
Sbjct: 23 DENDVGLQKVEEVRKKLDDLN------LDEIQRRRLEEFLNEKRKIGELSND 68
>SB_11388| Best HMM Match : MFS_1 (HMM E-Value=0.0022)
Length = 720
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 115 LFCCPVIIYYFSISLNSQY 59
LF CPV+++ S+SLN Q+
Sbjct: 277 LFLCPVLVFLDSVSLNRQH 295
>SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)
Length = 298
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 355 VQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQ 534
++++E D + R R EK +EE +K + ++ + + R +E+KR E+ R +Q
Sbjct: 86 LESMEEDREKRRR-EKEEEERLKRAEEEKRREEKRREEKRREEELKRERKEQERREKERQ 144
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 316 EEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKR 495
+E ME R+ +E + E ERL + +EED + EQ+ +R RL E +R
Sbjct: 1216 QELMESRRFQEEQDRLEEERRLEEERLRQLEEEDEQRRLEEEQIREAEEELR-RLQE-ER 1273
Query: 496 RELERLRHLA 525
E++R +A
Sbjct: 1274 EYREQMRKIA 1283
>SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 289 EDSEIKDDLEEYMEYHRYLKEVVQALE-SDPDFR-ERLEKADEEDVKSGKIAEQLDFVNH 462
E++ DDL ++ + RYL E ++A S D + +E+ D +D S L +NH
Sbjct: 22 EETSSVDDLGDFEQEERYLNECLRAANGSTEDVQYSEVEEYDFDDFNSIASTASLLNLNH 81
Query: 463 ---NVRTR 477
N RTR
Sbjct: 82 PPDNPRTR 89
>SB_33687| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 700
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Frame = +1
Query: 259 YAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESD----------PDFRERLEKAD 408
YA T ++ + ++ + E+ E + +KE V ALE DF + +
Sbjct: 530 YADDFTSERQDRERVQAEKEKISEQLKAVKEQVLALEEQVLKQQLRVYADDFTSERQDRE 589
Query: 409 EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMG 570
+ KI+EQL V V L+E R E R ++ L L ++ G
Sbjct: 590 RVQAEKEKISEQLKAVKEQV-LALEEQLRIYEEDFRRERQEKERLQRQLQLSPG 642
>SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30)
Length = 315
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 448 DFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHL 594
+ V+ +R R +E + E+ LRHL + + +H + G VPSS L
Sbjct: 22 NIVDRYLRKRREEARADEVT-LRHLKEMEKRMWTHMHKHWGLVPSSPPL 69
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 95 YNWATKQHLFK--NNTINIKRKLSLLTCRFSRPCKINS 202
+ W ++ H ++ NNT NI ++S + +RP K NS
Sbjct: 2480 FAWTSRTHRYRRANNTTNIFPRISKSSASNTRPLKSNS 2517
>SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21)
Length = 570
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 298 EIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKAD 408
+++ LE+Y+ Y +YL++V++ E + RE + + D
Sbjct: 385 KVQHRLEKYIIYQQYLEKVLENAEEFQEIREIIARYD 421
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 470 LTLWLTKSSCSAIFPDLTSSSSAFSNRSLKSGSLSNACTT 351
L ++LT SS + D +SSS+ S+ S SLS+ T+
Sbjct: 986 LRVFLTSSSSRGLLSDFLTSSSSLSDFLTSSSSLSDFLTS 1025
>SB_2616| Best HMM Match : Na_trans_assoc (HMM E-Value=2.6)
Length = 252
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 199 LINMRLLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDDLEE 321
L+ + L+T G + H S P+TP+ E + +DLE+
Sbjct: 53 LVFILALLTCGMFMSIAHASLDAPITPNSEELEKRLNDLEK 93
>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 808
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 397 EKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLR 516
E D+ + K +E L FV+ +RTR EIKR + E ++
Sbjct: 742 EAKRHRDILAQKESE-LSFVSEQLRTRESEIKRNQEEEVK 780
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKS-----GKIAEQL 447
++E +K +LE + R LKE V ALE + +E+ ++D++S G++ +
Sbjct: 261 RNELDGVKGELESLEQTLRELKEKVHALEEENGEKEQEISKLKDDLESANSELGRVGQVK 320
Query: 448 DFVNHNVRTRLDEIK 492
+++ LD+ K
Sbjct: 321 SVTESQLQSDLDKTK 335
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 27.5 bits (58), Expect = 9.3
Identities = 25/99 (25%), Positives = 41/99 (41%)
Frame = +1
Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAE 441
+P PD S I +E + L EV E D L DEE+ K +
Sbjct: 347 SPRDHPDSQGSSLIAKLTDEIEALRKSLHEVEHENEELSDENRAL---DEENAKLTEEKR 403
Query: 442 QLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLH 558
L+ + +R ++++ LE + HL + EL + L+
Sbjct: 404 TLEDTVNKLRAQINDTLDTTLEEIEHLHSFNEELESKLN 442
>SB_14697| Best HMM Match : Psf2 (HMM E-Value=8.7e-08)
Length = 323
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 415 DVKSGKIAEQLDFV--NHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSE 588
D++ K+ + +D + V RLD++ E+ +R L T+ ++L + PS+E
Sbjct: 263 DLRVAKLRKSVDLMVGQQAVHARLDDLTLMEINTIRPLLTESLNHMHNLRCVASENPSTE 322
>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 343 LKEVVQALESDPDFRERLEKADEEDVKSGK 432
LK+ ++ L+++ + E+ K E+D+KSGK
Sbjct: 1349 LKKKIKDLKTENEREEKARKQREKDIKSGK 1378
>SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1520
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 325 MEYHRYLKEVVQALESDP-DFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRL 480
ME+H+ + S P DF+ER+ K D+ S +E DF N + + +L
Sbjct: 596 MEHHK--SSASAGVPSPPSDFKERITKVDDLPYDSTSASELEDFTNLSDKKQL 646
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.5 bits (58), Expect = 9.3
Identities = 25/99 (25%), Positives = 41/99 (41%)
Frame = +1
Query: 262 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAE 441
+P PD S I +E + L EV E D L DEE+ K +
Sbjct: 325 SPRDHPDSQGSSLIAKLTDEIEALRKSLHEVEHENEELSDENRAL---DEENAKLTEEKR 381
Query: 442 QLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLH 558
L+ + +R ++++ LE + HL + EL + L+
Sbjct: 382 TLEDTVNKLRAQINDTLDTTLEEIEHLHSFNEELESKLN 420
>SB_3121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 487 IKRRELERLRHLATKQFELTNDLHVNMGKVPSSE 588
I+ ++ R RH A K F+++ + HVN+ KV +S+
Sbjct: 254 IRLAKIIRKRHAARKVFQVSTEQHVNL-KVSASD 286
>SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 328 EYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLD 450
+ H YL + AL D D RERL++ ED+ + E+ D
Sbjct: 108 QVHYYL--LCDALPEDRDLRERLQRVQLEDILECQQRERSD 146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,093
Number of Sequences: 59808
Number of extensions: 313870
Number of successful extensions: 1452
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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