BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f04 (621 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 26 1.1 AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 25 1.5 AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 4.5 CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal pe... 23 5.9 AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 7.8 >AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8 protein. Length = 261 Score = 25.8 bits (54), Expect = 1.1 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 Query: 319 EYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 447 +Y E H YLK VV+ + DP L + D ++++QL Sbjct: 33 DYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQL 75 >AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. Length = 615 Score = 25.4 bits (53), Expect = 1.5 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = +1 Query: 271 VTPDKSEDSEIKDDLEEYMEYHRY-LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 447 V+P + E + E+ EY R K++ E+ + +K + E ++ K + Sbjct: 91 VSPAEKETEVLCQQEREFREYLRNGSKKMTSTWENT--VQNIRDKKEAERLRRDKAKVEE 148 Query: 448 DFVNHNVRTRLDEIKRREL 504 D ++ DEIKRREL Sbjct: 149 DQRHYRELKAADEIKRREL 167 >AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase protein. Length = 1248 Score = 23.8 bits (49), Expect = 4.5 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = +1 Query: 484 EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFE 621 E +RRE+ER R ++ + + ++ +PS E + + T E Sbjct: 1190 ERRRREMERTRRQRQRRARDSQAITIHFSPLPSDEIQERRSTLTAE 1235 >CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal peptidase protein. Length = 247 Score = 23.4 bits (48), Expect = 5.9 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 364 LESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNV 468 LE D D KA + K+ E++D+V+H+V Sbjct: 122 LELDADGHLPRAKAQQHYEAMVKLREKVDYVSHSV 156 >AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein protein. Length = 3325 Score = 23.0 bits (47), Expect = 7.8 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 313 LEEYMEYHRYLKEVVQALESDPDFRERLEKADEED 417 L E + + E + A SDP+ +++L + DEE+ Sbjct: 1187 LNEMVNNDKLTSEQMAATLSDPEKQKQLLQQDEEE 1221 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 584,472 Number of Sequences: 2352 Number of extensions: 10188 Number of successful extensions: 18 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 60214320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -