Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f04
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    26   1.1  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   1.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.5  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   5.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.8  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 319 EYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 447
           +Y E H YLK VV+ +  DP     L   +  D    ++++QL
Sbjct: 33  DYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQL 75


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +1

Query: 271 VTPDKSEDSEIKDDLEEYMEYHRY-LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 447
           V+P + E   +     E+ EY R   K++    E+    +   +K + E ++  K   + 
Sbjct: 91  VSPAEKETEVLCQQEREFREYLRNGSKKMTSTWENT--VQNIRDKKEAERLRRDKAKVEE 148

Query: 448 DFVNHNVRTRLDEIKRREL 504
           D  ++      DEIKRREL
Sbjct: 149 DQRHYRELKAADEIKRREL 167


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +1

Query: 484  EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFE 621
            E +RRE+ER R    ++   +  + ++   +PS E  +  +  T E
Sbjct: 1190 ERRRREMERTRRQRQRRARDSQAITIHFSPLPSDEIQERRSTLTAE 1235


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 364 LESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNV 468
           LE D D      KA +      K+ E++D+V+H+V
Sbjct: 122 LELDADGHLPRAKAQQHYEAMVKLREKVDYVSHSV 156


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 313  LEEYMEYHRYLKEVVQALESDPDFRERLEKADEED 417
            L E +   +   E + A  SDP+ +++L + DEE+
Sbjct: 1187 LNEMVNNDKLTSEQMAATLSDPEKQKQLLQQDEEE 1221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,472
Number of Sequences: 2352
Number of extensions: 10188
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)