Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f04
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 70 2e-12
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 34 0.094
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 32 0.29
Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical pr... 31 0.88
U97190-1|AAB52366.2| 495|Caenorhabditis elegans Cop-9 signaloso... 31 0.88
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 2.0
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 2.7
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 2.7
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 29 3.5
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 3.5
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 3.5
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 3.5
Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 4.7
AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical... 28 4.7
AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical... 28 4.7
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 27 8.2
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 27 8.2
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 27 8.2
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 27 8.2
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 27 8.2
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/89 (43%), Positives = 56/89 (62%)
Frame = +1
Query: 331 YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELER 510
Y +YL+EVV+ LESDP F ERL+ EED+K+G IA+ +D + V +L + K E+ER
Sbjct: 71 YTKYLEEVVKILESDPKFNERLKNMKEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIER 130
Query: 511 LRHLATKQFELTNDLHVNMGKVPSSEHLD 597
LR +Q + H N+ K+P +HLD
Sbjct: 131 LRKQIEEQIKADGGAH-NI-KMP--DHLD 155
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/89 (43%), Positives = 56/89 (62%)
Frame = +1
Query: 331 YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELER 510
Y +YL+EVV+ LESDP F ERL+ EED+K+G IA+ +D + V +L + K E+ER
Sbjct: 71 YTKYLEEVVKILESDPKFNERLKNMKEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIER 130
Query: 511 LRHLATKQFELTNDLHVNMGKVPSSEHLD 597
LR +Q + H N+ K+P +HLD
Sbjct: 131 LRKQIEEQIKADGGAH-NI-KMP--DHLD 155
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/89 (43%), Positives = 56/89 (62%)
Frame = +1
Query: 331 YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELER 510
Y +YL+EVV+ LESDP F ERL+ EED+K+G IA+ +D + V +L + K E+ER
Sbjct: 74 YTKYLEEVVKILESDPKFNERLKNMKEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIER 133
Query: 511 LRHLATKQFELTNDLHVNMGKVPSSEHLD 597
LR +Q + H N+ K+P +HLD
Sbjct: 134 LRKQIEEQIKADGGAH-NI-KMP--DHLD 158
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/82 (21%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 304 KDDLEEYMEYHRYLKEVVQALESDPDF-RERLEKADEEDVKSGKIAEQLDFVNHNVRTRL 480
K+DLE++++ H +KE ++ ++ F +E L A ++ + + +DFV + +
Sbjct: 299 KEDLEKFLQEHPKMKESLKYQKASDIFSKEPLWIAVNDEDRKEIFRDCIDFVARRDKEKK 358
Query: 481 DEIKRRELERLRHLATKQFELT 546
+E ++R++ H+ ++T
Sbjct: 359 EEDRKRDIAAFSHVLQSMEQIT 380
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 174 LHVSNDSFRLILIVLFLNRCCFVAQL*YTIFQFH 73
LH++N+ F L+L++LF N CF+ ++ FH
Sbjct: 195 LHITNEEFLLLLVLLFSNPGCFLEAGIQSLLNFH 228
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 32.3 bits (70), Expect = 0.29
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +1
Query: 358 QALESDPDFRERLEKAD--EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATK 531
Q L+S P E+LE A E+D+KS K+AE+LDF + + E+ER TK
Sbjct: 459 QILKS-PSKEEQLEIATVTEQDLKSLKLAEKLDF-------EIVDGMESEIERCYEAHTK 510
Query: 532 QFELTNDLHVN 564
F NDLH++
Sbjct: 511 SF---NDLHMH 518
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 32.3 bits (70), Expect = 0.29
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +1
Query: 358 QALESDPDFRERLEKAD--EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATK 531
Q L+S P E+LE A E+D+KS K+AE+LDF + + E+ER TK
Sbjct: 459 QILKS-PSKEEQLEIATVTEQDLKSLKLAEKLDF-------EIVDGMESEIERCYEAHTK 510
Query: 532 QFELTNDLHVN 564
F NDLH++
Sbjct: 511 SF---NDLHMH 518
>Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical
protein T12A7.2b protein.
Length = 367
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 98 NWATKQHLFKNNTINIKRKLSLLTCRFSRPCKINSSI*G 214
NW + +F+ N+ + + L C F RPC I I G
Sbjct: 126 NWVGEHCIFRCNSGVVNKTSGLCECLFGRPCTIQKCING 164
>Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical
protein T12A7.2a protein.
Length = 483
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 98 NWATKQHLFKNNTINIKRKLSLLTCRFSRPCKINSSI*G 214
NW + +F+ N+ + + L C F RPC I I G
Sbjct: 126 NWVGEHCIFRCNSGVVNKTSGLCECLFGRPCTIQKCING 164
>U97190-1|AAB52366.2| 495|Caenorhabditis elegans Cop-9 signalosome
subunit protein 2 protein.
Length = 495
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 313 LEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIK 492
LE+ +EY+R L +++ + ++ E+ A + + + + Q+D + H T LD +K
Sbjct: 82 LEKMLEYYRQLLTYIKSAVTK-NYSEKSINAILDYISTSR---QMDLLQHFYETTLDALK 137
Query: 493 RRELERLRHLA-TKQFELTNDLH 558
+ ERL TK +L DLH
Sbjct: 138 DAKNERLWFKTNTKLGKLFFDLH 160
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459
+K E+ E KD+ E E + +E + +E +E EK DEE K + E+ +
Sbjct: 304 EKKEEDEKKDE-EPKKEEEKKEEEQKEEVEK----KEEEEKKDEEPKKEEEKKEEEEKKE 358
Query: 460 HNVRTRLDEIKRRELE 507
V + ++++ +ELE
Sbjct: 359 DEVEEKSEKVEEKELE 374
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 29.5 bits (63), Expect = 2.0
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Frame = +1
Query: 241 VFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQAL--ESDPDFRERLEKADEE 414
V L+ P+TPD I+ L+ Y++++RYL+ V A+ P + KA +
Sbjct: 216 VCLYLLSCAPLTPDPDNIILIRTALQLYLKFNRYLEAVRCAIMVNDIPQVHQIFAKASDP 275
Query: 415 DVKSGK---IAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPS- 582
++ + F+++ D + EL HL L +L + K P
Sbjct: 276 LLRKQMAILLGRHQIFLDYEGSADSDAL--AELNSNAHLYEYFHSLARELDIMEPKTPEG 333
Query: 583 --SEHLDHT 603
HL+H+
Sbjct: 334 IYKSHLEHS 342
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 283 KSEDSE--IKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFV 456
K+ED E + + E++E HR + +ALE + R + E D+ED ++ A +
Sbjct: 335 KNEDRERATQKERREHLERHRQAEARAKALEKEKHERLQQEAKDKEDERARDKARKDAKA 394
Query: 457 NHNVRTRLD 483
++R D
Sbjct: 395 REEAKSRED 403
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 364 LESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHL 522
L+ + DFRE +K D+ V+ I EQL + N LD+I+ R R + L
Sbjct: 868 LKMEHDFRENEKKLDQVIVERAVIQEQLQQESEN-SAELDDIRGRLQTRNQEL 919
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFV-- 456
+ + E+ + LEE + L + ++ ES R+ + ++ ++GKI EQL V
Sbjct: 268 QQREQELSNILEEKEKESAQLLQQLE--ESRAALRDEQRHLEHQEAENGKIVEQLKTVSE 325
Query: 457 -NHNVRTRLDEIKRRELERLRHLATKQFELTNDLHV 561
N + ++ +++ L K+ EL ++L +
Sbjct: 326 LNEKLTMQVKDLQDASENELASFRQKEKELIDELRM 361
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical
protein C33D9.6 protein.
Length = 485
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +1
Query: 307 DDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDE 486
+DLE +E + E + + ++ + E K KI E ++ +N +
Sbjct: 180 EDLESILETKEQKLNDFEEREYETTCQLTMKHSLELAEKDQKILELEKYIRNNENQDVVA 239
Query: 487 IKRRELERLRHLATKQFELTNDLHVNMGKVPSSEH 591
+ R ELERLR ATK T+D + K+ ++H
Sbjct: 240 LTR-ELERLRSQATKDEPSTDDSTI---KISMAQH 270
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 343 LKEVVQALESDPDFRERLEKADEE-DVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRH 519
+KE+++ + + + +ERL+K +E D + K + + + E KR E+ER +
Sbjct: 219 IKEMLKKQQEEREEQERLQKEQQERDAQEEKERLEREHAEKERKEAAKEAKRLEVERQKA 278
Query: 520 LATKQ 534
T Q
Sbjct: 279 AGTYQ 283
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +1
Query: 283 KSEDSE--IKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFV 456
K ED E + D +++E HR + +ALE + RE+ EK +E+++ + +
Sbjct: 257 KKEDRERATQKDRSDHIERHRQAEARAEALEKEK--REQEEKQKKENLERVEKERREHIE 314
Query: 457 NH---NVRTRLDEIKRRELE 507
H R + E ++RELE
Sbjct: 315 RHRQAEARAKALEKEKRELE 334
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 343 LKEVVQALESDPDFRERLEKADEE-DVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRH 519
+KE+++ + + + +ERL+K +E D + K + + + E KR E+ER +
Sbjct: 219 IKEMLKKQQEEREEQERLQKEQQERDAQEEKERLEREHAEKERKEAAKEAKRLEVERQKA 278
Query: 520 LATKQ 534
T Q
Sbjct: 279 AGTYQ 283
>Z75550-6|CAA99930.1| 591|Caenorhabditis elegans Hypothetical
protein T22C1.8 protein.
Length = 591
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 397 EKADEEDVKSGKIAEQLDFVNHN 465
EK DE+D K G + ++L F+ HN
Sbjct: 28 EKVDEKDKKKGGVLKRLGFLLHN 50
>Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical
protein C07G2.2a protein.
Length = 457
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 385 RERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVN 564
R R K +E D G++ + ++ + + T+ +++ RRELER+ L T++ V
Sbjct: 358 RYRKRKKEEHDDMMGRV-QAMEAEKNQLLTQ-NQVLRRELERVTALLTER----ESRCVC 411
Query: 565 MGKVPSS--EHLDHTNAHT 615
+ VP S +H DH + +T
Sbjct: 412 LKGVPMSDEQHADHHHRNT 430
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 274 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDF 453
T ++ + K LEEY + ++ + + ++ RE+ D E K K+ + +
Sbjct: 196 TREELQQQRHKQQLEEYEKRNQEILRREEEIKQQNQEREKQINDDFEKRKQEKLQREEEM 255
Query: 454 VNHN-VRTRL--DEIKRRELERLR 516
N R +L D+ ++R+LE+L+
Sbjct: 256 KQQNQEREKLIADDFEKRKLEKLQ 279
>AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical
protein Y95B8A.12a protein.
Length = 621
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 355 VQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIK-RRELERLRHLATK 531
+Q + P + K EE+ GK+ + +D + ++R+ D ++ ERL+ L T+
Sbjct: 336 LQRITRLPILLREIHKRSEEEESKGKVEKVIDTMTESLRSIDDSVQWLHNFERLQQLQTQ 395
>AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical
protein Y95B8A.12b protein.
Length = 613
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 355 VQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIK-RRELERLRHLATK 531
+Q + P + K EE+ GK+ + +D + ++R+ D ++ ERL+ L T+
Sbjct: 328 LQRITRLPILLREIHKRSEEEESKGKVEKVIDTMTESLRSIDDSVQWLHNFERLQQLQTQ 387
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 274 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESD 375
T +K E SE+ D L Y+E R+L+ + +E D
Sbjct: 68 TREKKEMSELNDRLASYIEKVRFLEAQNRKMEKD 101
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 274 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDF 453
T K E+++ K+ E R K QA RLEK + + K + E+LD
Sbjct: 395 TRKKEENNKRKEKKEAEKLLERSYKRAEQARVRYEKTGIRLEKRRQLEEKRRRRQEELDD 454
Query: 454 VNHNVRTRLDEIKRRELERLRHLATKQFE 540
+ + D+I R+ + K+FE
Sbjct: 455 IRRQGEYKRDQILERKKKLKEIKDQKEFE 483
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = +1
Query: 385 RERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRH 519
R + + + E+ G+ + D N++ R+D++K+R++ +LR+
Sbjct: 405 RRKQKWENRENKTEGEKQTKQDKRKKNLQKRIDDVKKRKMNKLRN 449
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/45 (24%), Positives = 27/45 (60%)
Frame = +1
Query: 385 RERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRH 519
R + + + E+ G+ + D N++ R+D++K+R++ +LR+
Sbjct: 423 RRKQKWENRENKTEGEKQTKQDKRKKNLQKRIDDVKKRKMNKLRN 467
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 274 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESD 375
T +K E SE+ D L Y+E R+L+ + +E D
Sbjct: 49 TREKKEMSELNDRLASYIEKVRFLEAQNRKMEKD 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,086,649
Number of Sequences: 27780
Number of extensions: 247455
Number of successful extensions: 1120
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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