Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f04
(621 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 32 0.27
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 30 1.1
At3g61710.2 68416.m06916 autophagy protein Apg6 family contains ... 30 1.1
At3g61710.1 68416.m06915 autophagy protein Apg6 family contains ... 30 1.1
At3g02930.1 68416.m00288 expressed protein ; expression support... 30 1.1
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 29 1.9
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 29 1.9
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 29 2.5
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 28 4.3
At4g15430.1 68417.m02360 early-responsive to dehydration protein... 28 4.3
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica... 28 4.3
At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing ... 28 4.3
At5g24370.1 68418.m02873 invertase/pectin methylesterase inhibit... 28 5.7
At3g04630.2 68416.m00496 expressed protein 27 7.6
At3g04630.1 68416.m00495 expressed protein 27 7.6
At2g17150.1 68415.m01980 RWP-RK domain-containing protein simila... 27 7.6
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 32.3 bits (70), Expect = 0.27
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 462
+ E E K+ LEE + L+E + LESD + R E + D+ K+AE+++
Sbjct: 589 EKETQEYKEMLEESEKCRVLLEEQISQLESDSNENIR-ELCSKVDIAYAKLAEEVEKTAS 647
Query: 463 NVRTRLDEIKRRELERLRHL 522
VR + + I E R R L
Sbjct: 648 LVR-KSESIDLNEEHRQREL 666
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQAL-ESDPDFRERLEKADEEDVKSGKIAEQLDFVN 459
KSE +K++ ++ + VQ L E LE + EE+ KS K E L
Sbjct: 414 KSELETVKEEKNRALKKEQDATSRVQRLSEEKSKLLSDLESSKEEEEKSKKAMESLASAL 473
Query: 460 HNVRTRLDEIKRRELERLRH 519
H V + E+K + L + H
Sbjct: 474 HEVSSEGRELKEKLLSQGDH 493
>At3g61710.2 68416.m06916 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 386
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 253 CSYAPPVTPDKSEDSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVK 423
C V DK E E++D D+E Y + L+ Q + S+ DF + +K +EE+ K
Sbjct: 172 CLECMRVLSDKLE-KEVEDVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERK 230
Query: 424 SGKIAEQLDFVNHNVRTRLDEIK 492
E+ + N V +L E++
Sbjct: 231 LVAAIEETEKQNAEVNHQLKELE 253
>At3g61710.1 68416.m06915 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 517
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 253 CSYAPPVTPDKSEDSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVK 423
C V DK E E++D D+E Y + L+ Q + S+ DF + +K +EE+ K
Sbjct: 172 CLECMRVLSDKLE-KEVEDVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERK 230
Query: 424 SGKIAEQLDFVNHNVRTRLDEIK 492
E+ + N V +L E++
Sbjct: 231 LVAAIEETEKQNAEVNHQLKELE 253
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 352 VVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELER 510
V + LE LE + EE+ KS K E L H V + E+K + L R
Sbjct: 427 VQRLLEEKKKILSELESSKEEEEKSKKAMESLASALHEVSSESRELKEKLLSR 479
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 462
K E ++K + +E + +++ ++ ++ D RE K E V+ ++ ++ + +
Sbjct: 2213 KEEFGKMKSEAKEMEARYIEAQQIAESRKTYADEREEEVKLLEGSVE--ELEYTINVLEN 2270
Query: 463 NVRTRLDE-----IKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNA 609
V DE ++R ELE H +Q E + M ++ +H+D A
Sbjct: 2271 KVNVVKDEAERQRLQREELEMELHTIRQQMESARNADEEMKRILDEKHMDLAQA 2324
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +1
Query: 283 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 462
+ E+ +KD+ EE E L+ V ++ SD D + ADE V G+ A D
Sbjct: 14 EEEEERVKDNEEEDEEE---LEAVARSSGSDDD---EVAAADESPVSDGEAAPVEDDYED 67
Query: 463 NVRTRLDEIKRRELERLRHL 522
EI +RE RL+ +
Sbjct: 68 EEDEEKAEISKREKARLKEM 87
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 29.1 bits (62), Expect = 2.5
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = +1
Query: 268 PVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 447
P TP+K E+ E +D+ E+ E +EVV ++ + ++E + + + +
Sbjct: 262 PKTPEKVEEEEEEDEEEDEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEFRRAVAKT 321
Query: 448 DFV---NHNVRTRLDEIKRRELE--RLRHLATKQFELTNDLHVNMGKVPSSEHLDHT 603
+ N+ LDEI R L+ +K E T LH + + ++DH+
Sbjct: 322 SAAASSSVNLMKILDEIDDRFLKASECAQEVSKMLEATR-LHYHSNFADNRGYVDHS 377
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 28.3 bits (60), Expect = 4.3
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 241 VFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 420
+++ CS + P+ + S S KDD+ ++E ++ + + D +E+
Sbjct: 207 IWISCSDSSPLNSESSPSSSTKDDINTFIESDPPVEADMWDVAEQMDPSLPVEETLHSMD 266
Query: 421 KSGKIAEQLDFVNH-NVRTRLD-EIKRRELER 510
S KI EQ D +H +V L+ E+ RE R
Sbjct: 267 FSYKIPEQDDLDSHVSVSAGLNGEVLMREKVR 298
>At4g15430.1 68417.m02360 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 756
Score = 28.3 bits (60), Expect = 4.3
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 217 LVTIGCMIVFLHCS--YAPP-VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFR 387
L+TIG HC Y P VT +++ IKD L+ E + LK ++ + P+FR
Sbjct: 657 LLTIG---FHKHCKNRYQPAFVTYPLQQEAMIKDTLDRIREPNLNLKAFLRDAYAHPEFR 713
Query: 388 ERLEKADEEDVKS 426
+ EE ++S
Sbjct: 714 VGEDPEPEEKLES 726
>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
Length = 802
Score = 28.3 bits (60), Expect = 4.3
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = +1
Query: 289 EDSEIKDDLEEYMEYHRYLKEVVQALES------DPDFRERLEKADEEDVKSGKIAEQLD 450
ED + D YHR+ + +Q LES PD ++RLE + +++ Q+
Sbjct: 124 EDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLET----RQVK 179
Query: 451 FVNHNVRTRL-DEIKRRELERLR 516
F N RT++ +++R E LR
Sbjct: 180 FWFQNRRTQMKTQLERHENALLR 202
>At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing
protein heterogeneous nuclear ribonucleoprotein R, Homo
sapiens, PIR:T02673; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 471
Score = 28.3 bits (60), Expect = 4.3
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 286 SEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHN 465
S +SE + DL+ + L+E V+ E + + E +E+ EE+V+ + E+ D
Sbjct: 14 SMESEERVDLDGDNDPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEED----A 69
Query: 466 VRTRLDEIKRRELERL 513
V T +E K+R +E L
Sbjct: 70 VATEEEEEKKRHVELL 85
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 280 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEED 417
D D++ ++ LEE +EY +E ++ +E + + +E+ +EE+
Sbjct: 22 DLDGDNDPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEE 67
>At5g24370.1 68418.m02873 invertase/pectin methylesterase inhibitor
family protein contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 191
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 202 INMRLLVTIGCMIVFLHCSYAPPVTPDKSEDSEI 303
+NM L++T MI+ H ++ V PDK S I
Sbjct: 5 MNMNLIITSLVMILISHLPFSSTVNPDKPTKSII 38
>At3g04630.2 68416.m00496 expressed protein
Length = 286
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +1
Query: 316 EEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDF 453
E+ EY++ L+E QALE++ + E+ +K DE++ ++ + L F
Sbjct: 135 EKRKEYYQKLEEKNQALEAERNELEQRQK-DEQEAALKQLRKNLKF 179
>At3g04630.1 68416.m00495 expressed protein
Length = 287
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +1
Query: 316 EEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDF 453
E+ EY++ L+E QALE++ + E+ +K DE++ ++ + L F
Sbjct: 136 EKRKEYYQKLEEKNQALEAERNELEQRQK-DEQEAALKQLRKNLKF 180
>At2g17150.1 68415.m01980 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 909
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 316 EEYMEYHRYLKEVVQALESDPDFRERLE--KADEEDVKSGKIAEQLDFVNHNVRTRLDEI 489
E M+ ++ +++A E D E K D +++ SG+ QLD V +NV +++
Sbjct: 506 EIQMQESSWIAHMIKANEKGKDVSLSWEYQKEDPKELSSGRENSQLDPVPNNVPLEAEQL 565
Query: 490 KRRELERLR 516
++ LR
Sbjct: 566 QQASTPGLR 574
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,072,618
Number of Sequences: 28952
Number of extensions: 220982
Number of successful extensions: 801
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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