Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f03
         (443 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    42   0.005
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    42   0.008
UniRef50_Q7EYD8 Cluster: Putative uncharacterized protein P0665F...    32   4.8  
UniRef50_A2SLQ4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_A0NE01 Cluster: ENSANGP00000031217; n=1; Anopheles gamb...    31   8.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 42.3 bits (95), Expect = 0.005
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = -3

Query: 423 WMDELTAHLVLSGYWSP 373
           W+DELTAHLVLSGYWSP
Sbjct: 159 WVDELTAHLVLSGYWSP 175



 Score = 33.5 bits (73), Expect = 2.1
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 376 PIDIYNVNAPPTSRYKF 326
           P  +Y+VNAPPTSRYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 41.5 bits (93), Expect = 0.008
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -2

Query: 250 AGWWYLPVRTHKRSYHQ*LRKL*YCG 173
           A WWYLP RTHKRSYH+   +  YCG
Sbjct: 569 AEWWYLPARTHKRSYHR--YQCSYCG 592


>UniRef50_Q7EYD8 Cluster: Putative uncharacterized protein
           P0665F09.120-1; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0665F09.120-1 - Oryza sativa subsp. japonica (Rice)
          Length = 496

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 34  GAFVLKRCTGVRIPQAGTNFSNEIRTQQMFTIDFHGE 144
           G  ++ RCTGV I   G N   +I T      DFHGE
Sbjct: 199 GGGLISRCTGVVIGWDGANKRAKILTAASVVCDFHGE 235


>UniRef50_A2SLQ4 Cluster: Putative uncharacterized protein; n=1;
           Methylibium petroleiphilum PM1|Rep: Putative
           uncharacterized protein - Methylibium petroleiphilum
           (strain PM1)
          Length = 127

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -1

Query: 215 EVLPPVITQIIILRVW-FLLHDVIPSPWKSIVNIC*VRISLEKLVPACGIRTPVHRFNTN 39
           +VLP ++T + ++ VW   LHD   S W  +V    V  +L  L+  CG+R  V R    
Sbjct: 47  DVLPALLTTVFLVSVWGRRLHDRGRSAWWLLVVALPVLGALWLLL-ECGLRASVDRSRYG 105

Query: 38  AP 33
           AP
Sbjct: 106 AP 107


>UniRef50_A0NE01 Cluster: ENSANGP00000031217; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000031217 - Anopheles gambiae
           str. PEST
          Length = 111

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 290 GWGSRCNYTETLELISRGGWRIYV 361
           G G RC YT  L+ +SR GW +YV
Sbjct: 37  GAGRRCGYT--LDAVSRAGWTVYV 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,127,844
Number of Sequences: 1657284
Number of extensions: 9654558
Number of successful extensions: 20263
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20262
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)