Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f03
         (443 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73098-8|CAA97334.2|  303|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guany...    28   3.5  
U29096-2|AAX88830.1|  133|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z73098-8|CAA97334.2|  303|Caenorhabditis elegans Hypothetical
           protein T21C9.7 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 11/51 (21%), Positives = 27/51 (52%)
 Frame = -1

Query: 299 YPTLRTETHYCFTAEIGGVVVPTRADSQEVLPPVITQIIILRVWFLLHDVI 147
           +P      ++ ++  +GG    T A+S EVL  ++T +I+  ++    +++
Sbjct: 148 WPIATNNAYFIYSPTLGGFATKTVANSTEVLNSLVTFMIVFTLFTATANIV 198


>Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 317 QYSYNGYPTLRTETHYCFTAEIGGVVVPTRADSQEVLPPVITQII-ILRVWFLL 159
           +Y    YP LR  + YC +    G+++  R+     L  VI Q++ + RV++ L
Sbjct: 105 EYFRFSYPKLRAPSFYCKSESEDGLILHYRSRRTGYLSYVIGQLVELARVFYQL 158


>Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 317 QYSYNGYPTLRTETHYCFTAEIGGVVVPTRADSQEVLPPVITQII-ILRVWFLL 159
           +Y    YP LR  + YC +    G+++  R+     L  VI Q++ + RV++ L
Sbjct: 105 EYFRFSYPKLRAPSFYCKSESEDGLILHYRSRRTGYLSYVIGQLVELARVFYQL 158


>AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-33 protein.
          Length = 945

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 317 QYSYNGYPTLRTETHYCFTAEIGGVVVPTRADSQEVLPPVITQII-ILRVWFLL 159
           +Y    YP LR  + YC +    G+++  R+     L  VI Q++ + RV++ L
Sbjct: 105 EYFRFSYPKLRAPSFYCKSESEDGLILHYRSRRTGYLSYVIGQLVELARVFYQL 158


>U29096-2|AAX88830.1|  133|Caenorhabditis elegans Hypothetical
           protein F30H5.5 protein.
          Length = 133

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 28  TSGAFVLKRCTG-VRIPQAGTNFSNEIRTQQMFTIDFHGEGI 150
           TS A +L+     ++  Q  T   NE  T+Q+FT+D++   I
Sbjct: 23  TSDAEILEITNAHIKAIQVATRSMNETATRQLFTLDYNNPKI 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,984,769
Number of Sequences: 27780
Number of extensions: 228890
Number of successful extensions: 463
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)