Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e22
(493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 31 1.6
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 31 1.6
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 31 1.6
AL034555-2|CAI19525.1| 240|Homo sapiens zinc finger and BTB dom... 31 1.6
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 31 1.6
BC033985-1|AAH33985.1| 165|Homo sapiens hypothetical gene suppo... 30 3.8
D87443-1|BAA13384.2| 1009|Homo sapiens KIAA0254 protein. 30 5.0
BC031620-1|AAH31620.1| 803|Homo sapiens SNX19 protein protein. 30 5.0
AF395843-1|AAK73124.1| 992|Homo sapiens SNX19 protein. 30 5.0
AF293341-1|AAK35009.1| 642|Homo sapiens collagen-like Alzheimer... 29 8.8
AC097473-2|AAY40947.1| 317|Homo sapiens unknown protein. 29 8.8
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 219 EKTLADKGTMQRHLRCALGEGPCDMV 296
++ AD G +QRH+R GE PC V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 219 EKTLADKGTMQRHLRCALGEGPCDMV 296
++ AD G +QRH+R GE PC V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 219 EKTLADKGTMQRHLRCALGEGPCDMV 296
++ AD G +QRH+R GE PC V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533
>AL034555-2|CAI19525.1| 240|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 240
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 219 EKTLADKGTMQRHLRCALGEGPCDMV 296
++ AD G +QRH+R GE PC V
Sbjct: 64 QRQFADPGALQRHVRIHTGEKPCQCV 89
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 219 EKTLADKGTMQRHLRCALGEGPCDMV 296
++ AD G +QRH+R GE PC V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533
>BC033985-1|AAH33985.1| 165|Homo sapiens hypothetical gene
supported by BC033985 protein.
Length = 165
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 258 LRCALGEGPCDMVG-RRLRTLAPFVLRGACPQCSVQESR 371
L C+LG+ P + G RR T F R CP CS SR
Sbjct: 86 LSCSLGQAPRQLYGRRRCTTHILFPGRACCPGCSECGSR 124
>D87443-1|BAA13384.2| 1009|Homo sapiens KIAA0254 protein.
Length = 1009
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 306 LRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQ 440
L P CP+ Q R I RT+ I R++ W R V Q
Sbjct: 96 LERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRSVSQ 140
>BC031620-1|AAH31620.1| 803|Homo sapiens SNX19 protein protein.
Length = 803
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 306 LRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQ 440
L P CP+ Q R I RT+ I R++ W R V Q
Sbjct: 79 LERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRSVSQ 123
>AF395843-1|AAK73124.1| 992|Homo sapiens SNX19 protein.
Length = 992
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 306 LRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQ 440
L P CP+ Q R I RT+ I R++ W R V Q
Sbjct: 79 LERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRSVSQ 123
>AF293341-1|AAK35009.1| 642|Homo sapiens collagen-like Alzheimer
amyloid plaque component precursor type II protein.
Length = 642
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 277 SPSAHLRCLCIVPLSARVFSNCAS 206
SPS H+ CL ++ LSA +FS C S
Sbjct: 618 SPSQHVPCLILLLLSALLFSLCDS 641
>AC097473-2|AAY40947.1| 317|Homo sapiens unknown protein.
Length = 317
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 277 SPSAHLRCLCIVPLSARVFSNCAS 206
SPS H+ CL ++ LSA +FS C S
Sbjct: 293 SPSQHVPCLILLLLSALLFSLCDS 316
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,480,439
Number of Sequences: 237096
Number of extensions: 1628516
Number of successful extensions: 3034
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3034
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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