Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e22
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...   116   1e-28
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...   116   1e-28
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    69   3e-14
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    56   3e-10
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    56   3e-10
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    38   8e-05
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    38   8e-05
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.4  

>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score =  116 bits (279), Expect = 1e-28
 Identities = 49/82 (59%), Positives = 67/82 (81%)
 Frame = +3

Query: 198 QMSDAQLEKTLADKGTMQRHLRCALGEGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHI 377
           ++SD QL   L+D+  ++R L+CALGE PCD VGRRL++LAP VLRGACPQCS +E+R I
Sbjct: 32  RVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEETRQI 91

Query: 378 RRTLAYIQRNYPWEWARIVRQY 443
           ++ L++IQR YP EW++IV+QY
Sbjct: 92  KKVLSHIQRTYPKEWSKIVQQY 113


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score =  116 bits (279), Expect = 1e-28
 Identities = 49/82 (59%), Positives = 67/82 (81%)
 Frame = +3

Query: 198 QMSDAQLEKTLADKGTMQRHLRCALGEGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHI 377
           ++SD QL   L+D+  ++R L+CALGE PCD VGRRL++LAP VLRGACPQCS +E+R I
Sbjct: 32  RVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEETRQI 91

Query: 378 RRTLAYIQRNYPWEWARIVRQY 443
           ++ L++IQR YP EW++IV+QY
Sbjct: 92  KKVLSHIQRTYPKEWSKIVQQY 113


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 68.9 bits (161), Expect = 3e-14
 Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +3

Query: 171 LVLTVLAAPQM-SDAQLEKTLADKGTMQRHLRCALGEGPCDMVGRRLRTLAPFVLRGACP 347
           L  T+LA   + +   + K L D+  +Q+ L C L  G CD++G++++ L P VL   C 
Sbjct: 7   LFFTILALINVKAQDDISKFLKDRPYVQKQLHCILDRGHCDVIGKKIKELLPEVLNNHCN 66

Query: 348 QCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 443
           +C+ ++       + ++Q+NYP+EW  I+R+Y
Sbjct: 67  RCTSRQIGIANTLIPFMQQNYPYEWQLILRRY 98


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 55.6 bits (128), Expect = 3e-10
 Identities = 23/100 (23%), Positives = 49/100 (49%)
 Frame = +3

Query: 144 IVFIGVCTCLVLTVLAAPQMSDAQLEKTLADKGTMQRHLRCALGEGPCDMVGRRLRTLAP 323
           ++F+ V    V+      +  D  +++ L +   +  +++C L EGPC   GR L+ + P
Sbjct: 6   LLFVLVTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKKILP 65

Query: 324 FVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 443
             L   C +C+ ++     + + Y++   P +W R+  +Y
Sbjct: 66  DALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKY 105


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 55.6 bits (128), Expect = 3e-10
 Identities = 23/100 (23%), Positives = 49/100 (49%)
 Frame = +3

Query: 144 IVFIGVCTCLVLTVLAAPQMSDAQLEKTLADKGTMQRHLRCALGEGPCDMVGRRLRTLAP 323
           ++F+ V    V+      +  D  +++ L +   +  +++C L EGPC   GR L+ + P
Sbjct: 6   LLFVLVTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKKILP 65

Query: 324 FVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 443
             L   C +C+ ++     + + Y++   P +W R+  +Y
Sbjct: 66  DALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKY 105


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 37.5 bits (83), Expect = 8e-05
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
 Frame = +3

Query: 135 MKNIVFIGVCTCLVLTVLAAP-----QMSDAQLEKTLADKGTMQRHLRCALGEGPCDMVG 299
           MK I+   V  C +L  + +      +  +  ++  L  +  +  ++ C L +GPC    
Sbjct: 1   MKTILIALVPVCFLLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDA 60

Query: 300 RRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 443
             L+   P  L   C  CS ++ +   + + ++  N P  W  +  +Y
Sbjct: 61  AELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKY 108


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 37.5 bits (83), Expect = 8e-05
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
 Frame = +3

Query: 135 MKNIVFIGVCTCLVLTVLAAP-----QMSDAQLEKTLADKGTMQRHLRCALGEGPCDMVG 299
           MK I+   V  C +L  + +      +  +  ++  L  +  +  ++ C L +GPC    
Sbjct: 1   MKTILIALVPVCFLLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDA 60

Query: 300 RRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 443
             L+   P  L   C  CS ++ +   + + ++  N P  W  +  +Y
Sbjct: 61  AELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKY 108


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 342 CPQCS-VQESRHIRRTLAYIQRN 407
           CP    +QE RHIRR L    +N
Sbjct: 4   CPYARCIQERRHIRRELLRWTKN 26


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 387 LAYIQRNYPWEW 422
           L+   + YPW+W
Sbjct: 91  LSVFWQQYPWQW 102


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 174 VLTVLAAPQMSDAQLEKTLADK 239
           +L +   PQ+S A   K L+DK
Sbjct: 88  LLRLFHIPQISPASTAKALSDK 109


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 174 VLTVLAAPQMSDAQLEKTLADK 239
           +L +   PQ+S A   K L+DK
Sbjct: 178 LLRLFHIPQISPASTAKALSDK 199


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,546
Number of Sequences: 438
Number of extensions: 3254
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)