BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12e20 (460 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 157 4e-39 At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 155 2e-38 At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 68 4e-12 At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 59 2e-09 At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.040 At1g80910.1 68414.m09493 expressed protein 34 0.053 At1g16020.2 68414.m01922 expressed protein 32 0.21 At1g16020.1 68414.m01921 expressed protein 32 0.21 At5g26660.1 68418.m03174 myb family transcription factor (MYB4) ... 28 2.6 At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 2.6 At1g57560.1 68414.m06531 myb family transcription factor (MYB50)... 28 2.6 At1g09540.1 68414.m01070 myb family transcription factor (MYB61)... 28 2.6 At5g65760.1 68418.m08275 serine carboxypeptidase S28 family prot... 27 4.6 At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 4.6 At3g22170.1 68416.m02798 far-red impaired responsive protein, pu... 27 4.6 At3g58950.1 68416.m06569 F-box family protein contains F-box dom... 27 6.1 At1g34110.1 68414.m04230 leucine-rich repeat transmembrane prote... 27 6.1 At4g16146.1 68417.m02449 expressed protein 27 8.1 At3g54990.1 68416.m06102 AP2 domain-containing transcription fac... 27 8.1 At3g08950.1 68416.m01045 electron transport SCO1/SenC family pro... 27 8.1 At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 27 8.1 >At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1) identical to SP|Q96291 2-cys peroxiredoxin BAS1, chloroplast precursor {Arabidopsis thaliana}; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family Length = 266 Score = 157 bits (380), Expect = 4e-39 Identities = 77/128 (60%), Positives = 92/128 (71%), Gaps = 1/128 (0%) Frame = +2 Query: 80 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 256 +PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130 Query: 257 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 436 EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL + Sbjct: 131 SEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQ 190 Query: 437 GIPFRGLF 460 GI RGLF Sbjct: 191 GIALRGLF 198 >At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative very strong similarity to SP|Q96291 2-cys peroxiredoxin BAS1, chloroplast precursor {Arabidopsis thaliana}; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family Length = 273 Score = 155 bits (375), Expect = 2e-38 Identities = 75/128 (58%), Positives = 93/128 (72%), Gaps = 1/128 (0%) Frame = +2 Query: 80 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 256 +PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++ Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137 Query: 257 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 436 +EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL + Sbjct: 138 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ 197 Query: 437 GIPFRGLF 460 GI RGLF Sbjct: 198 GIALRGLF 205 >At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to peroxiredoxin Q [Sedum lineare] GI:6899842; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family Length = 216 Score = 67.7 bits (158), Expect = 4e-12 Identities = 47/140 (33%), Positives = 72/140 (51%) Frame = +2 Query: 2 FFISKASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGKY 181 FF S +HS +S V S + + + AP F NG K +SL YKGK Sbjct: 42 FFGSTLTHSSYISP-VSSSSLKGLIFAKVNKGQAAPDFTLKDQ-NG--KPVSLKKYKGKP 97 Query: 182 VVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLG 361 VVL+FYP D T C + AF + ++F+K G EV+G S D +H A+ + + Sbjct: 98 VVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKAFASKYK------ 151 Query: 362 PMNIPLISDKSHRISRDYGV 421 + L+SD+ +++ +D+GV Sbjct: 152 -LPYTLLSDEGNKVRKDWGV 170 >At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative identical to peroxiredoxin (Rehydrin homolog) [Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family Length = 216 Score = 58.8 bits (136), Expect = 2e-09 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Frame = +2 Query: 158 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 334 L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83 Query: 335 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGL 457 +N P+I+D + I ++D P R L Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRAL 124 >At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol specific antioxidant (AhpC/TSA)/mal allergen family protein identical to SP|Q9M7T0 Putative peroxiredoxin, mitochondrial precursor {Arabidopsis thaliana}; similar to thioredoxin peroxidase [Capsicum annuum] GI:18654477; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family Length = 201 Score = 34.3 bits (75), Expect = 0.040 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = +2 Query: 131 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 301 V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117 Query: 302 DSHFTHLAW 328 + F W Sbjct: 118 NDPFAINGW 126 >At1g80910.1 68414.m09493 expressed protein Length = 497 Score = 33.9 bits (74), Expect = 0.053 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%) Frame = +2 Query: 149 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 307 D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78 Query: 308 H 310 H Sbjct: 79 H 79 >At1g16020.2 68414.m01922 expressed protein Length = 502 Score = 31.9 bits (69), Expect = 0.21 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = +2 Query: 185 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 310 +LFFYP D F +I SE F ++ CEV+ A SH Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77 >At1g16020.1 68414.m01921 expressed protein Length = 515 Score = 31.9 bits (69), Expect = 0.21 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = +2 Query: 185 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 310 +LFFYP D F +I SE F ++ CEV+ A SH Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77 >At5g26660.1 68418.m03174 myb family transcription factor (MYB4) (MYB86) contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB86) mRNA, partial cds GI:3941517 Length = 352 Score = 28.3 bits (60), Expect = 2.6 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 449 GRGCPSPRPALRSRGRCGATCRL 381 G GC S P L RCG +CRL Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55 >At3g62170.1 68416.m06985 pectinesterase family protein contains Pfam profiles: PF01095 pectinesterase, PF04043 plant invertase/pectin methylesterase inhibitor ;similar to pollen-specific pectin esterase GI:1620652 from [Brassica rapa subsp. pekinensis] Length = 588 Score = 28.3 bits (60), Expect = 2.6 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -1 Query: 184 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 62 +IF VV + + VDD + + +G+G G R L+E D Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232 >At1g57560.1 68414.m06531 myb family transcription factor (MYB50) similar to DNA-binding protein GI:19058 from [Hordeum vulgare] Length = 314 Score = 28.3 bits (60), Expect = 2.6 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 449 GRGCPSPRPALRSRGRCGATCRL 381 G GC S P L RCG +CRL Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55 >At1g09540.1 68414.m01070 myb family transcription factor (MYB61) contains PFAM profile: myb DNA-binding domain PF00249 Length = 366 Score = 28.3 bits (60), Expect = 2.6 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 449 GRGCPSPRPALRSRGRCGATCRL 381 G GC S P L RCG +CRL Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55 >At5g65760.1 68418.m08275 serine carboxypeptidase S28 family protein similar to SP|P42785 Lysosomal Pro-X carboxypeptidase precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP) (Proline carboxypeptidase) {Homo sapiens}; contains Pfam profile PF05577: Serine carboxypeptidase S28 Length = 515 Score = 27.5 bits (58), Expect = 4.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 Query: 17 ASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGE 142 ASH +L +F +++ VF N L +K P+F N E Sbjct: 2 ASHFCLLLIFTFFTLVFPSNGSSLSSSKLLPRFPRYTFQNRE 43 >At4g28395.1 68417.m04064 lipid transfer protein, putative identical to anther-specific gene ATA7 [gi:2746339]; contains Pfam protease inhibitor/seed storage/LTP family domain Length = 180 Score = 27.5 bits (58), Expect = 4.6 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -2 Query: 402 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 301 M C + + G+F PSP C RGV VK S Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109 >At3g22170.1 68416.m02798 far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family Length = 839 Score = 27.5 bits (58), Expect = 4.6 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +1 Query: 328 DQHAAQAGRTRSHEHPSDKRQVAP 399 D H+ AG+T ++P+ KR+V P Sbjct: 698 DNHSRSAGKTSKKKNPTKKRKVNP 721 >At3g58950.1 68416.m06569 F-box family protein contains F-box domain Pfam:PF00646 Length = 417 Score = 27.1 bits (57), Expect = 6.1 Identities = 10/37 (27%), Positives = 22/37 (59%) Frame = -2 Query: 366 MGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSS 256 +GP P L+ ++I + ++C+++E + P+L S Sbjct: 99 LGPVLPMLKTLIIDSAWIRCDTIETFLPTFPVLEELS 135 >At1g34110.1 68414.m04230 leucine-rich repeat transmembrane protein kinase, putative contains similarity to receptor protein kinase-like protein GI:10177178 from [Arabidopsis thaliana] Length = 1045 Score = 27.1 bits (57), Expect = 6.1 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = -2 Query: 366 MGPSP---PCLRGVLIQARCVKCESVEAPSTSQPILRNSSA 253 + PSP P ++ V+ VKC E TSQP+++ SS+ Sbjct: 1005 VNPSPVERPTMKEVVTLLMEVKCSPEEWGKTSQPLIKPSSS 1045 >At4g16146.1 68417.m02449 expressed protein Length = 102 Score = 26.6 bits (56), Expect = 8.1 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%) Frame = +2 Query: 344 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFR 451 K GGL P PLIS S R S D+ +L +E I R Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQR 63 >At3g54990.1 68416.m06102 AP2 domain-containing transcription factor, putative similar to (SP:P47927) Floral homeotic protein APETALA2, Arabidopsis thaliana, U12546 Length = 247 Score = 26.6 bits (56), Expect = 8.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 196 EEQHNIFPLVVRQRNVLELSVDDGRGLELGS 104 +E ++FP+V R +E SV+D L L S Sbjct: 70 KETGDLFPVVADARRNIEFSVEDSHWLNLSS 100 >At3g08950.1 68416.m01045 electron transport SCO1/SenC family protein similar to SP|P23833 SCO1 protein, mitochondrial precursor {Saccharomyces cerevisiae}; contains Pfam profile PF02630: SCO1/SenC Length = 334 Score = 26.6 bits (56), Expect = 8.1 Identities = 10/49 (20%), Positives = 26/49 (53%) Frame = +2 Query: 125 AVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRK 271 +++ + K ++ + GK+ +L+F +CP E+I + D+ ++ Sbjct: 178 SLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKE 226 >At1g76740.1 68414.m08931 expressed protein weak similarity to fimbriae-associated protein Fap1 (GI:3929312) [Streptococcus parasanguinis]; weak similarity to 1MDa_1 protein (GI:24620455) [Caenorhabditis elegans] Length = 1532 Score = 26.6 bits (56), Expect = 8.1 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = -2 Query: 324 ARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHTNVKSKG 199 ++C K + + A S P +N+SAF E A+ + N+ +G Sbjct: 777 SKCFKEDELRAWSEPLPRNKNASAFDELAIFTTPERNLMLRG 818 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,472,859 Number of Sequences: 28952 Number of extensions: 150369 Number of successful extensions: 538 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 530 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 535 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 762235320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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