Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e20
(460 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 157 4e-39
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 155 2e-38
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 68 4e-12
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 59 2e-09
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.040
At1g80910.1 68414.m09493 expressed protein 34 0.053
At1g16020.2 68414.m01922 expressed protein 32 0.21
At1g16020.1 68414.m01921 expressed protein 32 0.21
At5g26660.1 68418.m03174 myb family transcription factor (MYB4) ... 28 2.6
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 2.6
At1g57560.1 68414.m06531 myb family transcription factor (MYB50)... 28 2.6
At1g09540.1 68414.m01070 myb family transcription factor (MYB61)... 28 2.6
At5g65760.1 68418.m08275 serine carboxypeptidase S28 family prot... 27 4.6
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 4.6
At3g22170.1 68416.m02798 far-red impaired responsive protein, pu... 27 4.6
At3g58950.1 68416.m06569 F-box family protein contains F-box dom... 27 6.1
At1g34110.1 68414.m04230 leucine-rich repeat transmembrane prote... 27 6.1
At4g16146.1 68417.m02449 expressed protein 27 8.1
At3g54990.1 68416.m06102 AP2 domain-containing transcription fac... 27 8.1
At3g08950.1 68416.m01045 electron transport SCO1/SenC family pro... 27 8.1
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 27 8.1
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 157 bits (380), Expect = 4e-39
Identities = 77/128 (60%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Frame = +2
Query: 80 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 256
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 257 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 436
EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL +
Sbjct: 131 SEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQ 190
Query: 437 GIPFRGLF 460
GI RGLF
Sbjct: 191 GIALRGLF 198
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 155 bits (375), Expect = 2e-38
Identities = 75/128 (58%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Frame = +2
Query: 80 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 256
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 257 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 436
+EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL +
Sbjct: 138 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ 197
Query: 437 GIPFRGLF 460
GI RGLF
Sbjct: 198 GIALRGLF 205
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 67.7 bits (158), Expect = 4e-12
Identities = 47/140 (33%), Positives = 72/140 (51%)
Frame = +2
Query: 2 FFISKASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGKY 181
FF S +HS +S V S + + + AP F NG K +SL YKGK
Sbjct: 42 FFGSTLTHSSYISP-VSSSSLKGLIFAKVNKGQAAPDFTLKDQ-NG--KPVSLKKYKGKP 97
Query: 182 VVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLG 361
VVL+FYP D T C + AF + ++F+K G EV+G S D +H A+ + +
Sbjct: 98 VVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKAFASKYK------ 151
Query: 362 PMNIPLISDKSHRISRDYGV 421
+ L+SD+ +++ +D+GV
Sbjct: 152 -LPYTLLSDEGNKVRKDWGV 170
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 58.8 bits (136), Expect = 2e-09
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +2
Query: 158 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 334
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 335 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGL 457
+N P+I+D + I ++D P R L
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRAL 124
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 34.3 bits (75), Expect = 0.040
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 131 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 301
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 302 DSHFTHLAW 328
+ F W
Sbjct: 118 NDPFAINGW 126
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.9 bits (74), Expect = 0.053
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +2
Query: 149 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 307
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78
Query: 308 H 310
H
Sbjct: 79 H 79
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.21
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 185 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 310
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.21
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 185 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 310
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At5g26660.1 68418.m03174 myb family transcription factor (MYB4)
(MYB86) contains Pfam profile: PF00249 myb-like
DNA-binding domain; identical to cDNA putative
transcription factor (MYB86) mRNA, partial cds
GI:3941517
Length = 352
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 449 GRGCPSPRPALRSRGRCGATCRL 381
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 184 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 62
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At1g57560.1 68414.m06531 myb family transcription factor (MYB50)
similar to DNA-binding protein GI:19058 from [Hordeum
vulgare]
Length = 314
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 449 GRGCPSPRPALRSRGRCGATCRL 381
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>At1g09540.1 68414.m01070 myb family transcription factor (MYB61)
contains PFAM profile: myb DNA-binding domain PF00249
Length = 366
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 449 GRGCPSPRPALRSRGRCGATCRL 381
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At5g65760.1 68418.m08275 serine carboxypeptidase S28 family protein
similar to SP|P42785 Lysosomal Pro-X carboxypeptidase
precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP)
(Proline carboxypeptidase) {Homo sapiens}; contains Pfam
profile PF05577: Serine carboxypeptidase S28
Length = 515
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 17 ASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGE 142
ASH +L +F +++ VF N L +K P+F N E
Sbjct: 2 ASHFCLLLIFTFFTLVFPSNGSSLSSSKLLPRFPRYTFQNRE 43
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 402 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 301
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
>At3g22170.1 68416.m02798 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 839
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 328 DQHAAQAGRTRSHEHPSDKRQVAP 399
D H+ AG+T ++P+ KR+V P
Sbjct: 698 DNHSRSAGKTSKKKNPTKKRKVNP 721
>At3g58950.1 68416.m06569 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -2
Query: 366 MGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSS 256
+GP P L+ ++I + ++C+++E + P+L S
Sbjct: 99 LGPVLPMLKTLIIDSAWIRCDTIETFLPTFPVLEELS 135
>At1g34110.1 68414.m04230 leucine-rich repeat transmembrane protein
kinase, putative contains similarity to receptor protein
kinase-like protein GI:10177178 from [Arabidopsis
thaliana]
Length = 1045
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -2
Query: 366 MGPSP---PCLRGVLIQARCVKCESVEAPSTSQPILRNSSA 253
+ PSP P ++ V+ VKC E TSQP+++ SS+
Sbjct: 1005 VNPSPVERPTMKEVVTLLMEVKCSPEEWGKTSQPLIKPSSS 1045
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 26.6 bits (56), Expect = 8.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 344 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFR 451
K GGL P PLIS S R S D+ +L +E I R
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQR 63
>At3g54990.1 68416.m06102 AP2 domain-containing transcription
factor, putative similar to (SP:P47927) Floral homeotic
protein APETALA2, Arabidopsis thaliana, U12546
Length = 247
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 196 EEQHNIFPLVVRQRNVLELSVDDGRGLELGS 104
+E ++FP+V R +E SV+D L L S
Sbjct: 70 KETGDLFPVVADARRNIEFSVEDSHWLNLSS 100
>At3g08950.1 68416.m01045 electron transport SCO1/SenC family
protein similar to SP|P23833 SCO1 protein, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02630: SCO1/SenC
Length = 334
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/49 (20%), Positives = 26/49 (53%)
Frame = +2
Query: 125 AVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRK 271
+++ + K ++ + GK+ +L+F +CP E+I + D+ ++
Sbjct: 178 SLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKE 226
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 324 ARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHTNVKSKG 199
++C K + + A S P +N+SAF E A+ + N+ +G
Sbjct: 777 SKCFKEDELRAWSEPLPRNKNASAFDELAIFTTPERNLMLRG 818
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,472,859
Number of Sequences: 28952
Number of extensions: 150369
Number of successful extensions: 538
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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