Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e16
(563 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565... 33 0.21
02_05_1265 - 35326506-35326773,35326944-35327109,35327194-353273... 32 0.27
06_03_0539 + 21919115-21919313,21919474-21919582,21920595-219208... 31 0.84
03_01_0298 + 2318836-2319051,2321238-2323106 30 1.1
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 29 1.9
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 29 2.6
01_01_0267 + 2201404-2202501 29 2.6
12_01_0273 - 1989058-1989349,1989730-1989837,1990315-1990508,199... 29 3.4
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152... 29 3.4
11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401,204... 29 3.4
03_02_0442 + 8529235-8529620,8529721-8529888,8529993-8530158,853... 29 3.4
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 4.5
09_01_0016 - 376742-376883,377973-378964 28 5.9
04_03_0357 + 14852584-14853058,14853116-14855754 28 5.9
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 28 5.9
11_01_0066 - 536281-537196,537397-537452 27 7.8
03_01_0226 + 1795120-1795686,1796040-1796171 27 7.8
01_06_0872 + 32609792-32610178,32611262-32611387,32611477-326115... 27 7.8
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 27 7.8
>03_05_0845 -
28155065-28155374,28156201-28156342,28156375-28156505,
28156591-28156784,28156859-28156969,28157234-28157399,
28157501-28157668,28157766-28158787
Length = 747
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 430 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDF 552
G+ K ++ ++M +QLGI+H++G A+ P R+L DF
Sbjct: 320 GQTISKGHKNYELMLQLQLGIRHSVGKSAAVPMRELSPADF 360
>02_05_1265 -
35326506-35326773,35326944-35327109,35327194-35327351,
35327779-35327966,35328046-35328156,35328311-35328476,
35328718-35328885,35329374-35330623
Length = 824
Score = 32.3 bits (70), Expect = 0.27
Identities = 25/102 (24%), Positives = 46/102 (45%)
Frame = +1
Query: 247 SSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKSDRKIGHRRVGE 426
SS L++SE+ + + + + V D + K + +KI R +
Sbjct: 338 SSGLERSESINDSDLPMLEREYMQGVLISEVVLDRSFSDSS--KKAKRRQKKIV-RETKK 394
Query: 427 GGEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDF 552
GE K +S +M S+QLGI++ +G + +R++ DF
Sbjct: 395 PGETIIKGHRSYDLMLSLQLGIRYTVGKITPIQKREVRASDF 436
>06_03_0539 +
21919115-21919313,21919474-21919582,21920595-21920819,
21921140-21921239,21921782-21921865,21922000-21922058,
21922578-21922770
Length = 322
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -3
Query: 477 RSHDLRGLYLLVCDLSALADAPVSDLPVRLVNFADRAHWADGWVVRYIFFGDRTPVAIIV 298
R ++L + ++V D+S D + + F D D W+ RY F G P A ++
Sbjct: 178 RENELSNVEIIVADISKFEMERSFDRIISIEMFEDNNE--DDWITRYFFTGGTMPSANLL 235
Query: 297 L 295
L
Sbjct: 236 L 236
>03_01_0298 + 2318836-2319051,2321238-2323106
Length = 694
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +1
Query: 217 GDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKSD 396
G S H+++ ++A ++AE + S I + D MG + V D
Sbjct: 379 GTSHHVQIHTFGFGTDHDSAAMHAIAETSNGTFSFIDAEGSIQDAFAQCMGGLLSVVVKD 438
Query: 397 RKIGHRRVGEGGEITYKKIQS--SQIMGSIQLGIQHAIGGLASKPERDLLM 543
++ + EG +T K S SQ+ G+ + G+ IG L + ER L+
Sbjct: 439 MRLCIECIDEGVSLTSIKSGSYASQVAGNERSGLVD-IGDLYADEERGFLV 488
>01_06_0675 + 31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +1
Query: 196 SETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAI 375
S +AS + + V+ + L + A +D+ + Y PA +
Sbjct: 806 SSLPVASQQNQQLSVVTLTPLADTGLAGSVEAEAEDNASDDGCSVGETEYSPAGASETSA 865
Query: 376 SKVHKSDRKIGHRRVGEGGEITYKKIQSSQIM----GSIQLGIQHAIGGLASKPER 531
+ HK+ +I + + G+ + + + +++ GS++ G A GG +KP +
Sbjct: 866 ERAHKAPSRITRFFLTKNGQPSTSRPKPREVVPKTQGSMRPGTAQATGGSLAKPSK 921
>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 223 SDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAV 357
S +++ E S + E+SVA+ D D +SI +NV D +
Sbjct: 1034 SKSLKIFEGSASIRESRDAERSVADSDKVDDASIESRNVDRDAEI 1078
>01_01_0267 + 2201404-2202501
Length = 365
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 314 GVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGASAR--AERSHTRRYSPRR 466
G+R + M QP+ WAR F SD G R + H ++ P R
Sbjct: 159 GLRRGRGMGARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLR 211
>12_01_0273 -
1989058-1989349,1989730-1989837,1990315-1990508,
1990601-1990717,1990801-1990966,1991323-1991490,
1991734-1993052
Length = 787
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 430 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDF 552
GE K ++ ++M ++QLGI+HA+G ++ DL F
Sbjct: 419 GETISKGHKNYELMLNLQLGIRHAVGRQSAPASLDLKSSAF 459
>11_06_0645 -
25814302-25814759,25814853-25815005,25815032-25815214,
25815342-25815531,25815624-25815784,25816136-25816623,
25817035-25817075
Length = 557
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 343 YDPAVGPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGS 477
Y GP G+ S +++ +GH V E G I+Y +I + GS
Sbjct: 450 YTETPGPGGSYSA---AEQNLGHLSVSEAGSISYNEISAVNEAGS 491
>11_01_0272 -
2042490-2042781,2043146-2043203,2043385-2043401,
2043572-2043765,2043858-2043974,2044059-2044224,
2044430-2044597,2044741-2046047
Length = 772
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 430 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDF 552
GE K ++ ++M ++QLGI+HA+G ++ DL F
Sbjct: 415 GETISKGHKNYELMLNLQLGIRHAVGRQSAPASLDLKSSAF 455
>03_02_0442 +
8529235-8529620,8529721-8529888,8529993-8530158,
8530579-8530689,8530845-8530993,8531087-8531217,
8531322-8531421,8532060-8532366
Length = 505
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 430 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDF 552
GE K +S +M ++QLGI +++G ++ P + L DF
Sbjct: 108 GEAIRKGHRSYSLMLNLQLGISYSVGKSSALPFQKLAASDF 148
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 292 AEDDDRDRSSIAEKNVPYDPAVGPMGA 372
AE+DDR ++ E +V Y P + P GA
Sbjct: 136 AEEDDRAKNPKPEDSVYYHPTLNPSGA 162
>09_01_0016 - 376742-376883,377973-378964
Length = 377
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = +1
Query: 220 DSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKSDR 399
+SD + L+ ++NA+ EDDD++ S + +V DPA+ + R
Sbjct: 167 ESDSSDDETLPALQANKNASPSDDDEDDDQESDS-GDDDVLLDPALQANKNV-LAFNGKR 224
Query: 400 KIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQ 495
K+ + VG+ KK + G+ + Q
Sbjct: 225 KVPPQEVGQSLRQPKKKKMEAPAQGNTDIDTQ 256
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 208 MASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKN 336
M + DS+ E ES + +A +S +ED+D D S+ E +
Sbjct: 921 MEASDSETEETEESDQGYEPSDAEPESESEDEDSDSESLVESD 963
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 280 EQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKS 393
EQ ED S IA++N A GPM I K H+S
Sbjct: 332 EQPKNEDSRMSESGIAQENNWEKQAKGPMETIYKGHRS 369
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 494 WMPSCIDPMICEDCIFLYVISPPSP 420
WM CI P++ DC Y S P+P
Sbjct: 173 WMKPCIGPVLACDCEPEYFDSDPAP 197
>03_01_0226 + 1795120-1795686,1796040-1796171
Length = 232
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 262 KSENATEQ-SVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKSD 396
K+E A E+ S AE D RDR + A++ + A GP ++ + D
Sbjct: 10 KAEAARERRSAAEADRRDRDARAKEEAYWQAAEGPKSRSARRREED 55
>01_06_0872 +
32609792-32610178,32611262-32611387,32611477-32611550,
32611944-32612013,32612088-32612143,32612236-32612307,
32612384-32612478,32612660-32612726,32612809-32612938,
32613135-32613350,32613461-32613591,32614044-32614218,
32614292-32614382,32614653-32614810,32615059-32615247,
32615551-32615564,32616003-32616228
Length = 758
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 208 MASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEK-NVPYDPAVGPMGAISKV 384
+A+G HIE + + V+K + E+ +DD + S + +K V + P + K
Sbjct: 88 VAAGGPHHIEELANKVVKMDGGSAEKIGGGEDDGNASPVPDKVQVGHSPQYKVERKLGKG 147
Query: 385 HKSDRKIGHRRVGEGGEIT 441
+G RRV G + T
Sbjct: 148 GFGQVYVG-RRVSGGTDRT 165
>01_06_0276 -
28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 368 ARSAKFTSRTGRSDTGASARAERSHTRRYSPRRS 469
A+ + RT + TGA RA RSH+ +P R+
Sbjct: 4 AQGMAYKLRTDAAPTGAGRRARRSHSSVAAPYRA 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,875,475
Number of Sequences: 37544
Number of extensions: 309761
Number of successful extensions: 1070
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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