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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e16
         (563 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g61100.1 68414.m06883 disease resistance protein (TIR class),...    32   0.23 
At1g50260.1 68414.m05635 C2 domain-containing protein low simila...    31   0.40 
At5g59020.1 68418.m07393 expressed protein                             31   0.70 
At5g26150.1 68418.m03110 protein kinase family protein contains ...    30   0.93 
At3g09920.1 68416.m01183 phosphatidylinositol-4-phosphate 5-kina...    30   0.93 
At1g67510.1 68414.m07690 leucine-rich repeat family protein cont...    30   0.93 
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID...    30   0.93 
At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705...    30   1.2  
At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kina...    29   1.6  
At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ...    29   2.8  
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ...    29   2.8  
At3g56960.1 68416.m06338 phosphatidylinositol-4-phosphate 5-kina...    29   2.8  
At3g29180.1 68416.m03657 expressed protein                             29   2.8  
At2g19640.2 68415.m02295 SET domain-containing protein contains ...    28   3.7  
At1g25280.2 68414.m03138 F-box family protein / tubby family pro...    28   3.7  
At1g25280.1 68414.m03137 F-box family protein / tubby family pro...    28   3.7  
At1g53830.1 68414.m06127 pectinesterase family protein identical...    28   5.0  
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor...    27   6.5  
At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kina...    27   6.5  
At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family...    27   8.7  
At3g56720.1 68416.m06309 expressed protein                             27   8.7  
At3g24740.1 68416.m03106 expressed protein                             27   8.7  
At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type pept...    27   8.7  
At2g30500.1 68415.m03715 kinase interacting family protein simil...    27   8.7  
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat...    27   8.7  
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina...    27   8.7  
At1g31660.1 68414.m03887 bystin family contains Pfam profile: PF...    27   8.7  

>At1g61100.1 68414.m06883 disease resistance protein (TIR class),
           putative domain signature TIR exists, suggestive of a
           disease resistance protein.
          Length = 808

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 193 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAE-DDDRDRSSIAEKN 336
           K+  K   GDSD  E  ESS   +SE+A++ S +  +D   R S   KN
Sbjct: 333 KTSKKKGKGDSDGDESSESSESSESESASDDSASSLEDQGKRHSRTSKN 381


>At1g50260.1 68414.m05635 C2 domain-containing protein low
           similarity to CLB1 [Lycopersicon esculentum] GI:2789434;
           contains Pfam profile PF00168: C2 domain
          Length = 675

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 357 DGWVVRYIFFGDRTPVAIIVLGD*LLRS 274
           D   +RY+FFG   P AI+ LGD ++RS
Sbjct: 409 DAQKLRYMFFGKTDPYAILRLGDQVIRS 436


>At5g59020.1 68418.m07393 expressed protein
          Length = 780

 Score = 30.7 bits (66), Expect = 0.70
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
 Frame = +1

Query: 118 KCEVSH--ENRYCAHKRIE*YLNTK*CKSETKMASGDSDH----IEVMES-SVLKKSENA 276
           K  V H  E  YC         N   C +E+K+ S D+D     +E+ +  S+L K+ N 
Sbjct: 229 KVRVVHGVEGDYCTQHSCPLPCNADGCLAESKLGSTDADQKKVSVELSQCVSLLTKARNK 288

Query: 277 TEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHK 390
           + +     +DR  S ++ K+  Y+P        SK HK
Sbjct: 289 SSKGKI-SEDRASSLLSVKHCMYEPC---QRQDSKTHK 322


>At5g26150.1 68418.m03110 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 703

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 21/83 (25%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +1

Query: 193 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDR--SSIAEKNVPYDPAVGPM 366
           K++ + A   ++  + M     ++ + A  ++V+E+ D+DR  S++A  +V Y       
Sbjct: 355 KAKCRTAVEAAEKAQRMAELEGQRRKQAEMKAVSEEKDKDRAVSALAHNDVRYRKY---- 410

Query: 367 GAISKVHKS-DRKIGHRRVGEGG 432
            +I ++ ++ +R   HR++GEGG
Sbjct: 411 -SIEEIEEATERFANHRKIGEGG 432


>At3g09920.1 68416.m01183 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 815

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 430 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDF 552
           GE+  K  +S  +M S+QLGI++ +G +     R +   DF
Sbjct: 385 GEVVIKGHRSYDLMLSLQLGIRYTVGKITPIQRRQVRTADF 425


>At1g67510.1 68414.m07690 leucine-rich repeat family protein
           contains protein kinase domain, Pfam:PF00069; contains
           leucine-rich repeats, Pfam:PF00560
          Length = 719

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 412 RRVGEGGEITYKK-IQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDFM 555
           RR+GEGGE  YK+ +   Q MG ++      +      P+  LL+ DF+
Sbjct: 438 RRLGEGGEQRYKEFVTEVQAMGKVKHPNVVKLRAYYWAPDEKLLISDFV 486


>At1g67120.1 68414.m07636 midasin-related similar to Midasin
            (MIDAS-containing protein) (Swiss-Prot:Q12019)
            [Saccharomyces cerevisiae]; similar to Midasin
            (MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
            sapiens]; contains Prosite PS00017: ATP/GTP-binding site
            motif A (P-loop)
          Length = 5336

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 280  EQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKSDRK 402
            E SV+ED++ D+     ++ P D  +G +G  S   K+D K
Sbjct: 4546 EYSVSEDEEEDKEDEGSEDEPLDNGIGDVG--SDAEKADEK 4584


>At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705:
           Eukaryotic protein of unknown function (DUF829)
          Length = 420

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
 Frame = +1

Query: 52  FRKVIDFFLIK-----LERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMAS 216
           +R VI  FL K     L +I   G+ A          C  +++   +N+   +S  ++A+
Sbjct: 264 YRAVISNFLEKAISVHLHKIRQLGERAHTHDEISELICDLQKVA--VNSN--QSLRRVAT 319

Query: 217 GDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSS 321
           G  DH  +  S+  + + N ++ S ++++ R+RSS
Sbjct: 320 GPCDHFFLPSSAPYQSNSNNSDPSSSQEEQRERSS 354


>At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 364 MGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQ-IMGSIQLGIQHAIGGLASKPERDLL 540
           M ++ + HK       R V     +T+ + + +  +M ++QLGI++ +G +   P R++ 
Sbjct: 300 MSSVDRSHKIKPPNRPREVRARSLMTFLRGEHNYYLMLNLQLGIRYTVGKITPVPRREVR 359

Query: 541 MQDF 552
             DF
Sbjct: 360 ASDF 363


>At5g26610.2 68418.m03181 D111/G-patch domain-containing protein
           contains Pfam PF01585: G-patch domain
          Length = 301

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +3

Query: 216 GRFRSHRSDGKFCFEKV*ERYGAVSRRGR*SRQEFDRRKKCTLRPSRRPNGRDQQSSQVG 395
           G   S+  + K  F+++ E +GA  R  R  R++  + ++ T     R   + QQS Q  
Sbjct: 178 GHLSSYDHNHKKRFKEMKEMHGASGRDERKKREQQRQEREMTKMADARKQHQMQQSQQEV 237

Query: 396 PED 404
           PE+
Sbjct: 238 PEN 240


>At5g26610.1 68418.m03180 D111/G-patch domain-containing protein
           contains Pfam PF01585: G-patch domain
          Length = 301

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +3

Query: 216 GRFRSHRSDGKFCFEKV*ERYGAVSRRGR*SRQEFDRRKKCTLRPSRRPNGRDQQSSQVG 395
           G   S+  + K  F+++ E +GA  R  R  R++  + ++ T     R   + QQS Q  
Sbjct: 178 GHLSSYDHNHKKRFKEMKEMHGASGRDERKKREQQRQEREMTKMADARKQHQMQQSQQEV 237

Query: 396 PED 404
           PE+
Sbjct: 238 PEN 240


>At3g56960.1 68416.m06338 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 779

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 367 GAISKVHKSDRKIGHRRVG-EGGEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDL 537
           G I  +  S   +   R G + GE   K  ++ ++M ++QLGI+HA+G  A     DL
Sbjct: 358 GFIQSLRPSPAPMRLPRAGRKQGETISKGHRNYELMLNLQLGIRHAVGKQAPVVSLDL 415


>At3g29180.1 68416.m03657 expressed protein
          Length = 513

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +1

Query: 298 DDDRDRSSIAEKNVPYDPAVG-------PMGAISKVHKSDRKIGHRRVGEGGEITYKKIQ 456
           D+D D  S+ E+NVP  P+ G       P G + +   S   +  +   E    TY KI 
Sbjct: 68  DEDEDFISLPEENVPSTPSAGGATGNNIPNGQVVQFESSSCFVDGKGKYEEYHETYLKID 127

Query: 457 SSQIMGSIQLGIQHAIGGLA 516
            S+    +  G+     GL+
Sbjct: 128 GSKAEKFVSKGMYKDPSGLS 147


>At2g19640.2 68415.m02295 SET domain-containing protein contains
           Pfam profile PF00856: SET domain
          Length = 398

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 190 CKSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDD 306
           CK E   + G+ D  E+ME    +  +   E SV E+++
Sbjct: 296 CKVEFSWSEGEEDENEIMEEMEDQDEQEEMEDSVGENEE 334


>At1g25280.2 68414.m03138 F-box family protein / tubby family
           protein similar to Tubby protein homolog (SP:O88808)
           [Rattus norvegicus]; contains Pfam PF00646: F-box domain
           and Pfam PF01167: Tub family;
          Length = 267

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 24/74 (32%), Positives = 31/74 (41%)
 Frame = +2

Query: 278 RSSQSPRTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGASARAERSHTRRYS 457
           RSS S    + +     K +   TQP    + SA  T RT RS         R H+RR S
Sbjct: 8   RSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRS---------RFHSRRVS 58

Query: 458 PRRSWDRYS*ASST 499
           P+     Y+ A  T
Sbjct: 59  PKVPSGSYNIAQIT 72


>At1g25280.1 68414.m03137 F-box family protein / tubby family
           protein similar to Tubby protein homolog (SP:O88808)
           [Rattus norvegicus]; contains Pfam PF00646: F-box domain
           and Pfam PF01167: Tub family;
          Length = 445

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 24/74 (32%), Positives = 31/74 (41%)
 Frame = +2

Query: 278 RSSQSPRTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGASARAERSHTRRYS 457
           RSS S    + +     K +   TQP    + SA  T RT RS         R H+RR S
Sbjct: 186 RSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRS---------RFHSRRVS 236

Query: 458 PRRSWDRYS*ASST 499
           P+     Y+ A  T
Sbjct: 237 PKVPSGSYNIAQIT 250


>At1g53830.1 68414.m06127 pectinesterase family protein identical to
           pectinesterase 2 (PME2/ PE 2) SP:Q42534 from
           [Arabidopsis thaliana];contains Pfam profiles: PF01095
           pectinesterase, PF04043 plant invertase/pectin
           methylesterase inhibitor
          Length = 587

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 229 HIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKN 336
           H+E M S+ L   +N TE  +A  + RD+SS    N
Sbjct: 204 HVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNN 239


>At5g42390.1 68418.m05161 metalloendopeptidase identical to
           chloroplast processing enzyme metalloendopeptidase
           [Arabidopsis thaliana] gi|2827039|gb|AAC39482
          Length = 1265

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = +1

Query: 232 IEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPM--GAISKVHKSDRKI 405
           IE ++S +L   E   E  V ++    +S + E  +  +P   P+    ++K+H  +  I
Sbjct: 704 IESVKSGLLAPIEAEPELEVPKELI-SQSQLKELTLQRNPCFVPIPGSGLTKLHDKETGI 762

Query: 406 GHRRVGEGGEITYKKIQSSQIMGSIQL 486
              R+  G  + YKK  +    G ++L
Sbjct: 763 TQLRLSNGIAVNYKKSTTESRAGVMRL 789


>At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 772

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 430 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDL 537
           GE   K  ++ ++M ++QLGI+H++G  A     DL
Sbjct: 373 GETISKGHRNYELMLNLQLGIRHSVGRQAPAASLDL 408


>At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family
           protein
          Length = 532

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 223 SDHIEVMESSVLKKSENATEQSVAEDDDRDRSSI 324
           S+H   ME +++KKSE A  Q +   D++ +SSI
Sbjct: 39  SEHFTSMEQNLMKKSE-ALRQMIETLDNQTQSSI 71


>At3g56720.1 68416.m06309 expressed protein 
          Length = 386

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = +2

Query: 368 ARSAKFTSRTGRSDTGASARAERSHTRRYSPRRSWDRYS 484
           ARS    SR GR         E S  R  S R S D+YS
Sbjct: 115 ARSTSRDSRGGRHSDRRRVETEYSRLRNDSDRSSHDKYS 153


>At3g24740.1 68416.m03106 expressed protein
          Length = 354

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +1

Query: 382 VHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAIG-GLASKPER 531
           +   DR  G R  G GG   +  +   Q++GS+  G   A G G  S+  R
Sbjct: 236 IENGDRFAGERETGNGGSDLWTTLLLFQMIGSLDNGGSSASGSGGGSRSHR 286


>At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type
           peptidyl-prolyl cis-trans isomerase, putative contains
           Pfam profile: PF00254, FKBP-type peptidyl-prolyl
           cis-trans isomerases
          Length = 694

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 17/78 (21%), Positives = 33/78 (42%)
 Frame = +1

Query: 97  LNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMASGDSDHIEVMESSVLKKSENA 276
           L SG+ AKCE + E +   HK ++   N +    +    S      E++      K  + 
Sbjct: 435 LESGEPAKCEKTFEAKINTHKTLD---NREDKPLDDAKLSPVQKDCEILSKKKRNKERSK 491

Query: 277 TEQSVAEDDDRDRSSIAE 330
           +   + + DD +  ++ E
Sbjct: 492 SSAIIIDSDDGEGKNMPE 509


>At2g30500.1 68415.m03715 kinase interacting family protein similar
           to kinase interacting protein 1 (GI:13936326) [Petunia
           integrifolia]
          Length = 517

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 196 SETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSI 324
           ++ K++   S H E  +SS L  S + ++ S A D+D D + I
Sbjct: 121 TKEKLSRRQSSHKEEEDSSSLTDSGSDSDHSSANDEDGDEALI 163


>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator of
            chromosome condensation (RCC1) family protein similar to
            zinc finger protein [Arabidopsis thaliana]
            gi|15811367|gb|AAL08940
          Length = 1028

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 193  KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAV 357
            KSET   + +  HI  M S   +   N T +S A +  R ++   EK V  +P V
Sbjct: 926  KSETVTQTSNQTHIRSMVSQDSQNENNLTSKSFA-NGHRKQNDKPEKVVQDEPGV 979


>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 769

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 466 IMGSIQLGIQHAIGGLASKPERDLLMQDF 552
           +M ++QLGI++ +G +   P R++   DF
Sbjct: 348 LMLNLQLGIRYTVGKITPVPPREVRASDF 376


>At1g31660.1 68414.m03887 bystin family contains Pfam profile:
           PF05291 Bystin
          Length = 442

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +1

Query: 199 ETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVP 342
           E K+   + D I+  + +   +S+   ++ + EDD++   S   KN P
Sbjct: 86  EQKILEEEEDDIDDFDGTFENQSQFDKQEEINEDDEKLFESFLNKNAP 133


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,913,075
Number of Sequences: 28952
Number of extensions: 244650
Number of successful extensions: 782
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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