Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e15
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VAQ7 Cluster: Pre-mRNA-splicing factor SLU7; n=6; End... 76 6e-13
UniRef50_UPI00015B4683 Cluster: PREDICTED: similar to step ii sp... 72 7e-12
UniRef50_Q1RLD5 Cluster: Zinc finger protein; n=1; Ciona intesti... 61 2e-08
UniRef50_Q4SH14 Cluster: Chromosome 1 SCAF14588, whole genome sh... 59 5e-08
UniRef50_O95391 Cluster: Pre-mRNA-splicing factor SLU7; n=30; Eu... 59 5e-08
UniRef50_A7S5V3 Cluster: Predicted protein; n=1; Nematostella ve... 58 9e-08
UniRef50_O23174 Cluster: Pre-mRNA-splicing factor SLU7-B; n=9; V... 54 2e-06
UniRef50_Q9LZT6 Cluster: Putative uncharacterized protein F16L2_... 52 6e-06
UniRef50_Q5KII3 Cluster: Pre-mRNA-splicing factor SLU7; n=1; Fil... 52 8e-06
UniRef50_Q54TA0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q4N2M3 Cluster: Step II splicing factor, putative; n=2;... 46 4e-04
UniRef50_UPI00006CBDF4 Cluster: Zinc knuckle family protein; n=1... 45 0.001
UniRef50_Q4P4L2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q21278 Cluster: Pre-mRNA-splicing factor SLU7; n=3; Bil... 43 0.004
UniRef50_A5K1U5 Cluster: Step II splicing factor, putative; n=3;... 43 0.005
UniRef50_Q4DB37 Cluster: Putative uncharacterized protein; n=3; ... 35 1.0
UniRef50_Q3E7N4 Cluster: Uncharacterized protein At5g33200.1; n=... 33 3.1
>UniRef50_Q9VAQ7 Cluster: Pre-mRNA-splicing factor SLU7; n=6;
Endopterygota|Rep: Pre-mRNA-splicing factor SLU7 -
Drosophila melanogaster (Fruit fly)
Length = 574
Score = 75.8 bits (178), Expect = 6e-13
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = +1
Query: 361 RVPISQILRNXXXXXXXXXXXXXSREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
R P+SQI+ + SREDWRKAKELEEARKAGTAPAAVDE G+DINP
Sbjct: 7 RTPVSQIILSKHDQDAEEEPKKKSREDWRKAKELEEARKAGTAPAAVDEEGRDINP 62
>UniRef50_UPI00015B4683 Cluster: PREDICTED: similar to step ii
splicing factor slu7; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to step ii splicing factor slu7 -
Nasonia vitripennis
Length = 598
Score = 72.1 bits (169), Expect = 7e-12
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +1
Query: 370 ISQILRNXXXXXXXXXXXXXSREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
+SQIL+N SREDWRKAKELEEARKAGTAPAAVDE GKDINP
Sbjct: 10 VSQILKNASILEDEPRKK--SREDWRKAKELEEARKAGTAPAAVDEEGKDINP 60
>UniRef50_Q1RLD5 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 568
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
SRE+WRK KELEEARK G APA VDE GKDINP
Sbjct: 33 SREEWRKKKELEEARKLGNAPAEVDEEGKDINP 65
>UniRef50_Q4SH14 Cluster: Chromosome 1 SCAF14588, whole genome
shotgun sequence; n=6; Coelomata|Rep: Chromosome 1
SCAF14588, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 248
Score = 59.3 bits (137), Expect = 5e-08
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
+REDWRK KELEE RK G APA VDE GKDINP
Sbjct: 10 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINP 42
>UniRef50_O95391 Cluster: Pre-mRNA-splicing factor SLU7; n=30;
Eumetazoa|Rep: Pre-mRNA-splicing factor SLU7 - Homo
sapiens (Human)
Length = 586
Score = 59.3 bits (137), Expect = 5e-08
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
+REDWRK KELEE RK G APA VDE GKDINP
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINP 61
>UniRef50_A7S5V3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 253
Score = 58.4 bits (135), Expect = 9e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
+R DWRK KELEEARKAGTAPA DE G+DINP
Sbjct: 16 TRLDWRKEKELEEARKAGTAPALQDEEGRDINP 48
>UniRef50_O23174 Cluster: Pre-mRNA-splicing factor SLU7-B; n=9;
Viridiplantae|Rep: Pre-mRNA-splicing factor SLU7-B -
Arabidopsis thaliana (Mouse-ear cress)
Length = 536
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
SRED RK ELEEARKAG APA VDE GK+INP
Sbjct: 10 SREDHRKKLELEEARKAGLAPAEVDEDGKEINP 42
>UniRef50_Q9LZT6 Cluster: Putative uncharacterized protein
F16L2_160; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F16L2_160 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 385
Score = 52.4 bits (120), Expect = 6e-06
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDIN 525
SR+D RK KELEEARKAG APA VDE GK+IN
Sbjct: 10 SRKDHRKQKELEEARKAGLAPAEVDEGGKEIN 41
>UniRef50_Q5KII3 Cluster: Pre-mRNA-splicing factor SLU7; n=1;
Filobasidiella neoformans|Rep: Pre-mRNA-splicing factor
SLU7 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 574
Score = 52.0 bits (119), Expect = 8e-06
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
SRE++R+ K+LE ARKAGTAPAA+DE G INP
Sbjct: 14 SREEYRRQKDLEAARKAGTAPAALDEQGNAINP 46
>UniRef50_Q54TA0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 558
Score = 51.6 bits (118), Expect = 1e-05
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
+R++++K KEL+EARKAG APA +DE GK+INP
Sbjct: 10 TRDEYKKEKELDEARKAGNAPAELDEEGKEINP 42
>UniRef50_Q4N2M3 Cluster: Step II splicing factor, putative; n=2;
Theileria|Rep: Step II splicing factor, putative -
Theileria parva
Length = 387
Score = 46.4 bits (105), Expect = 4e-04
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
SRE ++ +EL+EAR+AGT PA DE G DINP
Sbjct: 8 SRESLKRDRELDEARRAGTVPALKDELGNDINP 40
>UniRef50_UPI00006CBDF4 Cluster: Zinc knuckle family protein; n=1;
Tetrahymena thermophila SB210|Rep: Zinc knuckle family
protein - Tetrahymena thermophila SB210
Length = 697
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
S +++++ K LEEARKAG PA +DE GK+INP
Sbjct: 140 SSDEYKQQKALEEARKAGKIPAQLDEEGKEINP 172
>UniRef50_Q4P4L2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 650
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
SR ++R+ K+LEE RKAG APA +DE G INP
Sbjct: 25 SRAEFRRQKDLEEDRKAGRAPAELDEDGNIINP 57
>UniRef50_Q21278 Cluster: Pre-mRNA-splicing factor SLU7; n=3;
Bilateria|Rep: Pre-mRNA-splicing factor SLU7 -
Caenorhabditis elegans
Length = 647
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/34 (58%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVD-ETGKDINP 528
S+ + ++ ++LEE RKAGTAPA VD +TG+DINP
Sbjct: 25 SKAEVQRDRQLEEDRKAGTAPAMVDVQTGRDINP 58
>UniRef50_A5K1U5 Cluster: Step II splicing factor, putative; n=3;
Plasmodium|Rep: Step II splicing factor, putative -
Plasmodium vivax
Length = 456
Score = 42.7 bits (96), Expect = 0.005
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1
Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528
+RE+ +K KEL EARKAG A DE G DINP
Sbjct: 7 TREEKKKEKELNEARKAGKIEALKDEEGNDINP 39
>UniRef50_Q4DB37 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 464
Score = 35.1 bits (77), Expect = 1.0
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 433 REDWRKAKELEEARKAGTAPAAVDE-TGKDINP 528
R+ R +ELEE RK G AP AVDE +G +I+P
Sbjct: 28 RQRLRLKRELEEKRKFGLAPLAVDEVSGNEISP 60
>UniRef50_Q3E7N4 Cluster: Uncharacterized protein At5g33200.1; n=2;
Arabidopsis thaliana|Rep: Uncharacterized protein
At5g33200.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 426
Score = 33.5 bits (73), Expect = 3.1
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -2
Query: 386 RKICDIGTRDVVAIVCTIFS*YVVINFIHDYFGCSFCDKKVTN 258
+ ICD+ V +VCTI++ + +++ YF C C+KKVT+
Sbjct: 186 KSICDLLHSMEVRVVCTIYA--LDLDWSWYYFSCRNCNKKVTH 226
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,545,079
Number of Sequences: 1657284
Number of extensions: 6286660
Number of successful extensions: 13032
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13029
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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