BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12e15 (528 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein. 59 8e-09 DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein. 59 8e-09 BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 59 8e-09 AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 59 8e-09 AY486334-1|AAS59410.1| 60|Homo sapiens splicing factor protein. 56 6e-08 BC064830-1|AAH64830.1| 603|Homo sapiens TAF2 protein protein. 30 5.8 BC047732-1|AAH47732.1| 604|Homo sapiens TAF2 protein protein. 30 5.8 BC035673-1|AAH35673.1| 604|Homo sapiens TAF2 protein protein. 30 5.8 AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 30 5.8 AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 30 5.8 AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 30 5.8 >DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein. Length = 102 Score = 59.3 bits (137), Expect = 8e-09 Identities = 26/33 (78%), Positives = 27/33 (81%) Frame = +1 Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528 +REDWRK KELEE RK G APA VDE GKDINP Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINP 61 >DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein. Length = 101 Score = 59.3 bits (137), Expect = 8e-09 Identities = 26/33 (78%), Positives = 27/33 (81%) Frame = +1 Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528 +REDWRK KELEE RK G APA VDE GKDINP Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINP 61 >BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor homolog (S. cerevisiae) protein. Length = 586 Score = 59.3 bits (137), Expect = 8e-09 Identities = 26/33 (78%), Positives = 27/33 (81%) Frame = +1 Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528 +REDWRK KELEE RK G APA VDE GKDINP Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINP 61 >AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor SLU7 protein. Length = 586 Score = 59.3 bits (137), Expect = 8e-09 Identities = 26/33 (78%), Positives = 27/33 (81%) Frame = +1 Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDINP 528 +REDWRK KELEE RK G APA VDE GKDINP Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINP 61 >AY486334-1|AAS59410.1| 60|Homo sapiens splicing factor protein. Length = 60 Score = 56.4 bits (130), Expect = 6e-08 Identities = 25/32 (78%), Positives = 26/32 (81%) Frame = +1 Query: 430 SREDWRKAKELEEARKAGTAPAAVDETGKDIN 525 +REDWRK KELEE RK G APA VDE GKDIN Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDIN 60 >BC064830-1|AAH64830.1| 603|Homo sapiens TAF2 protein protein. Length = 603 Score = 29.9 bits (64), Expect = 5.8 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = -2 Query: 254 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 105 NINF + + +L F T++ L ++ +CR + +RI+ + FIY Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86 >BC047732-1|AAH47732.1| 604|Homo sapiens TAF2 protein protein. Length = 604 Score = 29.9 bits (64), Expect = 5.8 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = -2 Query: 254 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 105 NINF + + +L F T++ L ++ +CR + +RI+ + FIY Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86 >BC035673-1|AAH35673.1| 604|Homo sapiens TAF2 protein protein. Length = 604 Score = 29.9 bits (64), Expect = 5.8 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = -2 Query: 254 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 105 NINF + + +L F T++ L ++ +CR + +RI+ + FIY Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86 >AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor TAFII150 protein. Length = 1199 Score = 29.9 bits (64), Expect = 5.8 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = -2 Query: 254 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 105 NINF + + +L F T++ L ++ +CR + +RI+ + FIY Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86 >AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein associated factor protein. Length = 1189 Score = 29.9 bits (64), Expect = 5.8 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = -2 Query: 254 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 105 NINF + + +L F T++ L ++ +CR + +RI+ + FIY Sbjct: 27 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 76 >AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator function protein. Length = 1199 Score = 29.9 bits (64), Expect = 5.8 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = -2 Query: 254 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 105 NINF + + +L F T++ L ++ +CR + +RI+ + FIY Sbjct: 37 NINFHRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 57,957,478 Number of Sequences: 237096 Number of extensions: 924170 Number of successful extensions: 1586 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1577 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1586 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 5103531180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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