Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e09
         (518 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XYT3 Cluster: Putative uncharacterized protein; n=2; ...    36   0.56 
UniRef50_Q4RZX3 Cluster: Chromosome 18 SCAF14786, whole genome s...    35   1.3  
UniRef50_UPI0000DBFE1A Cluster: UPI0000DBFE1A related cluster; n...    33   3.9  
UniRef50_Q96XA0 Cluster: Putative uncharacterized protein STS259...    32   9.0  

>UniRef50_Q4XYT3 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 472

 Score = 35.9 bits (79), Expect = 0.56
 Identities = 18/69 (26%), Positives = 37/69 (53%)
 Frame = -1

Query: 422 NYST*ILLTEHM*ATNYKYIINANISLYH*NDCVKVQITPEICINFLKQIKTFGLCNVQI 243
           N  T + + E M   ++   I+  ++ Y+ NDC+ +Q T ++    +K+  TF + N  I
Sbjct: 272 NLCTTLTVNETMHVQHFVKYISTFLNSYNYNDCIILQPTQDLLKVKIKEEPTFFISNSNI 331

Query: 242 CSVVCFCKS 216
             ++ FC++
Sbjct: 332 YKIIYFCEN 340


>UniRef50_Q4RZX3 Cluster: Chromosome 18 SCAF14786, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 18
           SCAF14786, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 321

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 190 LTEIILNIELLQKHTTEHICTLHKPNVFICFRKLIHI 300
           L E + N+ L +K  T + CT H P+V I  RK+ H+
Sbjct: 99  LEEALANLALFRKSVTLNRCTSHVPSVLIDLRKMFHM 135


>UniRef50_UPI0000DBFE1A Cluster: UPI0000DBFE1A related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFE1A UniRef100 entry -
           Rattus norvegicus
          Length = 164

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 TLTKTHYRTYLYIT*AKCLYLFQKIDTYLWC-NLNFDTIILMVE*YVCIYNIFVVSCLHM 392
           T T TH  TYLY+    CLY+  K  TY +     +  + + V  YV +Y ++V   +++
Sbjct: 12  TYTYTHIHTYLYLYIDVCLYM--KAHTYAYIEGCVYVYVYVYVYVYVYVY-VYVYVYVYV 68

Query: 393 FCQ*YLC 413
           +   Y+C
Sbjct: 69  YVYVYVC 75


>UniRef50_Q96XA0 Cluster: Putative uncharacterized protein STS259;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein STS259 - Sulfolobus tokodaii
          Length = 57

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 305 PEICINFLKQIKTFGLCNVQICSVVCFCKSSIF 207
           P+IC+  L    + G CN + CS VCF K  IF
Sbjct: 26  PDICVGLLNYWSSSGGCNNR-CSTVCFEKEIIF 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,925,551
Number of Sequences: 1657284
Number of extensions: 8007220
Number of successful extensions: 13030
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13025
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)