Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e09
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.40 
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   8.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.7  

>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 267 CLYLFQKIDTYLWCNLNFD 323
           C   +  I T  WC LNFD
Sbjct: 316 CDVCYSTIGTVSWCELNFD 334


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 318 FDTIILMVE*YVCIYNIFVVS 380
           FD IIL +    C+Y++  +S
Sbjct: 2   FDKIILCLVYATCVYSVSEIS 22


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 219 LTKTHYRTYLYIT*AKCLYLFQKI 290
           L ++ Y  Y++++  KCL  F  +
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSV 314


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 219 LTKTHYRTYLYIT*AKCLYLFQKI 290
           L ++ Y  Y++++  KCL  F  +
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSV 314


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 219 LTKTHYRTYLYIT*AKCLYLFQKI 290
           L ++ Y  Y++++  KCL  F  +
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSV 314


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 219 LTKTHYRTYLYIT*AKCLYLFQKI 290
           L ++ Y  Y++++  KCL  F  +
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSV 314


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 178 VNLYLTEIILNIELLQKHTTEHICTLHKPNV 270
           +NL LTE + N     K     +C++ + N+
Sbjct: 176 INLLLTEQLQNRRFFAKKMEGLVCSIKELNM 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,966
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)