Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e09
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ084201-1|AAY86708.1|  640|Homo sapiens netrin-G1 ligand splice...    30   5.6  
BC041374-1|AAH41374.3|  640|Homo sapiens LRRC4C protein protein.       30   5.6  
AY358293-1|AAQ88660.1|  640|Homo sapiens LNKM292 protein.              30   5.6  
AB046800-1|BAB13406.1|  640|Homo sapiens KIAA1580 protein protein.     30   5.6  
AM183303-1|CAJ66088.1|  418|Homo sapiens autogenous vein graft r...    29   7.4  

>DQ084201-1|AAY86708.1|  640|Homo sapiens netrin-G1 ligand splice
           variant 3 protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 284 LKQIKTFGLCNVQICSVVCFCKSSIFKIISVR*RLTQV 171
           L+ +   GL   Q C  VC C +   K+I VR  L +V
Sbjct: 33  LQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREV 70


>BC041374-1|AAH41374.3|  640|Homo sapiens LRRC4C protein protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 284 LKQIKTFGLCNVQICSVVCFCKSSIFKIISVR*RLTQV 171
           L+ +   GL   Q C  VC C +   K+I VR  L +V
Sbjct: 33  LQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREV 70


>AY358293-1|AAQ88660.1|  640|Homo sapiens LNKM292 protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 284 LKQIKTFGLCNVQICSVVCFCKSSIFKIISVR*RLTQV 171
           L+ +   GL   Q C  VC C +   K+I VR  L +V
Sbjct: 33  LQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREV 70


>AB046800-1|BAB13406.1|  640|Homo sapiens KIAA1580 protein protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 284 LKQIKTFGLCNVQICSVVCFCKSSIFKIISVR*RLTQV 171
           L+ +   GL   Q C  VC C +   K+I VR  L +V
Sbjct: 33  LQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREV 70


>AM183303-1|CAJ66088.1|  418|Homo sapiens autogenous vein graft
           remodeling associated protein 2 protein.
          Length = 418

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = -1

Query: 374 YKYIINANISLYH*NDCVKVQITPEICINFLKQIKTFGLCNVQICSVVCFC 222
           Y+ + N ++      +CV + ++  +C+  ++ + T  LC      VVC C
Sbjct: 308 YRCMTNTHVYTQMHLECVCMYVSESVCVKSVECVCTESLCLCVCACVVCVC 358


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,929,756
Number of Sequences: 237096
Number of extensions: 1172471
Number of successful extensions: 5806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5805
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)