BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12e09 (518 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 28 4.6 U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical pr... 27 6.1 AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical ... 27 6.1 Z78239-2|CAI79140.1| 189|Caenorhabditis elegans Hypothetical pr... 27 8.0 >AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical protein Y54E2A.6 protein. Length = 1798 Score = 27.9 bits (59), Expect = 4.6 Identities = 6/23 (26%), Positives = 17/23 (73%) Frame = +3 Query: 9 LCTWPVLTLSNIEIIPNRGSAIN 77 LC WP++ + ++++ +RG+ ++ Sbjct: 1663 LCNWPIINMKIMQLVDSRGNCVD 1685 >U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical protein W09C3.1 protein. Length = 439 Score = 27.5 bits (58), Expect = 6.1 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +3 Query: 234 YRTYLYIT*AKCLYLFQKIDTYLWCNLNFDTIILMVE*YVCIYNIFVVSCLHMF 395 Y+ Y YI C QKI + N N DTII VCI + + +H + Sbjct: 98 YKDYRYIVMTLCGPDLQKIAELMNNNFNQDTII-----RVCIRTLLAIKTMHEY 146 >AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical protein M04F3.3 protein. Length = 439 Score = 27.5 bits (58), Expect = 6.1 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +3 Query: 234 YRTYLYIT*AKCLYLFQKIDTYLWCNLNFDTIILMVE*YVCIYNIFVVSCLHMF 395 Y+ Y YI C QKI + N N DTII VCI + + +H + Sbjct: 98 YKDYRYIVMTLCGPDLQKIAELMNNNFNQDTII-----RVCIRTLLAIKTMHEY 146 >Z78239-2|CAI79140.1| 189|Caenorhabditis elegans Hypothetical protein C30G7.2 protein. Length = 189 Score = 27.1 bits (57), Expect = 8.0 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = -3 Query: 213 NI*NYFSKVKVNTSQVLSHSFIINVMFLLTYSRF*YVPHIH 91 NI + F++V + T +L H FI++ ++ S F Y P+IH Sbjct: 149 NIKDVFNRV-IQTDVIL-HLFILSFFHYVSLSYFHYFPNIH 187 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,974,128 Number of Sequences: 27780 Number of extensions: 218021 Number of successful extensions: 373 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 366 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 373 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1007108110 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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