Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e08
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438... 100 8e-22
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 99 1e-21
01_06_0307 - 28361538-28361606,28361684-28361854,28361963-283620... 93 2e-19
09_06_0171 - 21308993-21309671,21309768-21309862,21309944-213100... 91 5e-19
03_05_0873 + 28428190-28428482,28428620-28428791,28428882-28429484 78 5e-15
03_02_0419 - 8296314-8296448,8296546-8296711,8296799-8296902,829... 62 3e-10
03_02_0420 - 8298303-8299265,8299351-8299431,8299546-8299668,829... 53 2e-07
02_01_0444 + 3212646-3212686,3213093-3213225,3213467-3213570,321... 50 2e-06
06_03_1186 - 28260487-28262112,28262205-28262345,28262429-282625... 46 2e-05
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 29 3.0
04_04_0040 + 22322839-22324173 29 3.0
09_04_0203 - 15556064-15556561,15557537-15557581,15557852-155582... 28 6.9
05_03_0408 + 13601576-13601748,13601795-13602104,13602597-136028... 28 6.9
02_05_0036 - 25292150-25293124,25294021-25294206,25294704-252948... 28 6.9
01_06_0684 + 31196825-31197252,31199189-31199291,31199402-311995... 28 6.9
10_08_1065 - 22640931-22641114,22641213-22641334,22641512-226416... 27 9.2
>08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,
4381944-4382047,4382127-4382259,4384477-4384653,
4385164-4385309,4385536-4385625,4385703-4385915,
4386090-4386182,4386743-4386937,4387018-4387110,
4387924-4388019,4388556-4388985,4389424-4390091,
4392074-4392271,4392690-4393407,4394036-4394181
Length = 1628
Score = 100 bits (240), Expect = 8e-22
Identities = 56/169 (33%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Frame = +3
Query: 99 KTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIREDYMVEAMEI 278
KT L+L+I R ++ R++IA+ + +G+ A+IRVEHIIRE+ M+ A EI
Sbjct: 1089 KTLLKLSIPRIKLLRNRRELQLRQMRRDIAKLLEAGQEATARIRVEHIIREENMMAAQEI 1148
Query: 279 VEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISDLLTAKYGKV 458
+E++C+LI R ++ KE L EAIS++ + APR D+ EL + + KYGK
Sbjct: 1149 LELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRC-ADLPELMQVQMMFATKYGKE 1207
Query: 459 YADACRGENVNT-ISDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTP 602
+ A + ++ ++ +S+ +PP + K L EIA+ + +++ P
Sbjct: 1208 FVAAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWDP 1256
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 99 bits (238), Expect = 1e-21
Identities = 54/171 (31%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Frame = +3
Query: 93 KLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIREDYMVEAM 272
K KT LR+A+ R ++ R+E+A+ + + + + A+IRVEH+IRE+ ++A
Sbjct: 20 KCKTALRMALARIKLLRNRKEVQVRQMRREVAQLLEADQDQTARIRVEHVIREEKFMQAY 79
Query: 273 EIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISDLLTAKYG 452
+++E+YC+L++AR ++ K L EAI+++I+ + R +DV EL + T+KYG
Sbjct: 80 DLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRC-SDVTELADVRKHFTSKYG 138
Query: 453 KVYADACRGENVNT-ISDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTP 602
K +A A ++ +S + K+S +P K L IA+ +N+++ P
Sbjct: 139 KEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEHNIKWEP 189
>01_06_0307 -
28361538-28361606,28361684-28361854,28361963-28362027,
28362467-28362565,28363005-28363099,28363199-28363413,
28364394-28364735,28365505-28365645,28365774-28365945,
28366073-28366176,28366799-28366911,28367158-28367222,
28367564-28367691
Length = 592
Score = 93.1 bits (221), Expect = 2e-19
Identities = 53/142 (37%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Frame = +3
Query: 174 RKEIAEYIASGKSERAKIRVEHIIREDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGL 353
RKE+ +Y+ +G+ A+IRVEHIIRE ++ A EIVE++C+ +LAR +V KE L
Sbjct: 84 RKEMVQYLQTGQESIARIRVEHIIREQNILAAYEIVELFCEFVLARVPIVEVQKECPFEL 143
Query: 354 AEAISTLIWVAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNT-ISDKLKHKMSVH 530
EAI+++I+ + R +D+ EL + L T KYGK + A ++ ++ + K+SV
Sbjct: 144 REAIASIIFASGRC-SDLPELMHLRTLFTTKYGKEFVAAAMELRPDSGVNRTIIEKLSVK 202
Query: 531 SPPKILVEKYLIEIAKNYNVEY 596
+P K L IA+ Y +E+
Sbjct: 203 APSAESKLKVLKAIAQEYGLEW 224
>09_06_0171 -
21308993-21309671,21309768-21309862,21309944-21310084,
21310177-21310348,21310445-21310548,21311254-21311370
Length = 435
Score = 91.5 bits (217), Expect = 5e-19
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Frame = +3
Query: 174 RKEIAEYIASGKSERAKIRVEHIIREDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGL 353
R++IA + + + A+IRVEH+IRE ++ A EI++++C+LI+ R ++ + KE L
Sbjct: 21 RRDIAALLRDRQEDTARIRVEHVIREQNIMAANEIIDLFCELIVTRLPIIAKQKECPADL 80
Query: 354 AEAISTLIWVAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNT-ISDKLKHKMSVH 530
E I +LI+ APR +++ EL I DL KYGK + A + +++ L K+SV
Sbjct: 81 KEGICSLIFAAPRC-SELPELGRIRDLFEKKYGKDFVSAAVDLRPDACVNNLLIEKLSVK 139
Query: 531 SPPKILVEKYLIEIAKNYNVEYTPDE 608
P K L EIAK + +++ E
Sbjct: 140 KPSGQTKLKILKEIAKEHQIDWDMTE 165
>03_05_0873 + 28428190-28428482,28428620-28428791,28428882-28429484
Length = 355
Score = 78.2 bits (184), Expect = 5e-15
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Frame = +3
Query: 75 TNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIRED 254
T +LK+ L LA+ R ++R ++ + + G +RA +R E +IRE
Sbjct: 12 TTKQTARLKSMLGLAVTRLGVLRGHRQVRCAQARGDVEQLLRLGHPDRALLRAEQVIREQ 71
Query: 255 YMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISDL 434
++A ++E YC+LI R LV +E E L EA + LI+ A R DV EL+ + L
Sbjct: 72 NTLDAFLMLESYCNLITERAALVDSHRECPEELREAAAGLIYAAARC-GDVPELQEVKRL 130
Query: 435 LTAKYGKVY-ADACRGENVNTISDKLKHKMSVHSPPKILVEKYLIEIA 575
+ AK+G+ + + A + I+ K+ K+S P + L EIA
Sbjct: 131 MAAKFGREFVSSAAELRSGCGINAKIVQKLSTKQPSLESRQMVLQEIA 178
>03_02_0419 -
8296314-8296448,8296546-8296711,8296799-8296902,
8297000-8297176
Length = 193
Score = 62.5 bits (145), Expect = 3e-10
Identities = 43/172 (25%), Positives = 80/172 (46%)
Frame = +3
Query: 75 TNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIRED 254
T+ +KLKT L LA+ R + ++ + + +RA R E +I ED
Sbjct: 8 TSKQTSKLKTLLGLAVLRIATARRPHLARKSIATDDVRQLLTLDHLDRAIHRAEQVIAED 67
Query: 255 YMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISDL 434
M+EA E++EMYC ++ + + E + + EA +++++ A +++ EL +
Sbjct: 68 NMLEAFEMIEMYCKRLIEHAAKLDKPGECTDEIREAAASVMFAA-GWCSELPELLFARTI 126
Query: 435 LTAKYGKVYADACRGENVNTISDKLKHKMSVHSPPKILVEKYLIEIAKNYNV 590
L K+G + +A + + + L K+S + L K EIA N+
Sbjct: 127 LADKFGSDFTEAAK-DGTGIVDPMLVWKLSSDAKSMELKRKVTKEIAMENNI 177
>03_02_0420 -
8298303-8299265,8299351-8299431,8299546-8299668,
8299815-8299983,8300108-8300478
Length = 568
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/100 (29%), Positives = 55/100 (55%)
Frame = +3
Query: 225 IRVEHIIREDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTD 404
++ E +I ED M+E ++IVE+YC +++ + + + KE E + EA + L++ + R D
Sbjct: 88 LQAEQVIDEDNMLEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARC-GD 146
Query: 405 VQELKIISDLLTAKYGKVYADACRGENVNTISDKLKHKMS 524
+ EL +L K+G+ +A A + + L K+S
Sbjct: 147 LPELLDARAILADKFGRDFAAAAKDGAHGVVDPTLVRKLS 186
>02_01_0444 +
3212646-3212686,3213093-3213225,3213467-3213570,
3214360-3214504,3214592-3214732,3214835-3216298
Length = 675
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/140 (22%), Positives = 60/140 (42%)
Frame = +3
Query: 87 YTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIREDYMVE 266
Y K K ++ R + +K++A+ I + A R+E +I E
Sbjct: 11 YNKCKHAIKCTRTRLDLVRRKKQAMVKFMKKDVADLIGNRLESHAFGRMEALIVEMNQAS 70
Query: 267 AMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISDLLTAK 446
+++E YC+ I+ + + + E + EA+STLI+ R ++ EL + + T +
Sbjct: 71 CYDMIEQYCEYIVKQLNNLQKQNECPQEALEAVSTLIFATARF-PELPELCDLRHMFTER 129
Query: 447 YGKVYADACRGENVNTISDK 506
YG E V + +K
Sbjct: 130 YGSFVEPFVSSEFVQKLQNK 149
>06_03_1186 -
28260487-28262112,28262205-28262345,28262429-28262573,
28262964-28263067,28263324-28263456,28263904-28264013,
28265144-28265167
Length = 760
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Frame = +3
Query: 63 KMFSTNPN---YTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRV 233
KMF + N Y K K + R + +K+IA+ + +G A R+
Sbjct: 31 KMFGSLLNSKFYNKCKHAFKCIRTRLALIRRKKQAMIRFMKKDIADLLTNGLDTHAFGRM 90
Query: 234 EHIIREDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQE 413
+ +I E +++E +C+ I + + + + + EA+STLI+ A R D+ E
Sbjct: 91 DGLIIEMNHASCYDMIEQFCEYIGKQLNSLQKQGDCPQETREAVSTLIFAAARF-PDLPE 149
Query: 414 LKIISDLLTAKYGKVYADACRGENVNTISDKL 509
L + + T +YG E V + +K+
Sbjct: 150 LCDLRHIFTERYGHFLEPFVSLEFVQKLDNKV 181
>04_04_1457 -
33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 183 IAEYIASGKSERAKIRVEHIIREDYMVEAMEIVEMYCDLI-LARFGLVTQMKELDEGLAE 359
+A YIA + + +I D ++ I+ L+ LA FG+ T++ E D
Sbjct: 136 VAVYIAQVLEGLVYLHEQGVIHRD--IKGANILTTKEGLVKLADFGVATKLTEADINTHS 193
Query: 360 AISTLIWVAPRM 395
+ T W+AP +
Sbjct: 194 VVGTPYWMAPEV 205
>04_04_0040 + 22322839-22324173
Length = 444
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 529 CTDILCFNLSLIVFTFSPLHASAY-TFPYFAVSKSDIIFNSCTSVCILGATHIRVDIASA 353
C D CF S VF P +S Y T P + S SD+ + CTS G T+ D +S
Sbjct: 126 CVD--CFKQSTPVF--DPSSSSTYATVPCSSASCSDLPTSKCTSASKCGYTYTYGDSSST 181
Query: 352 R 350
+
Sbjct: 182 Q 182
>09_04_0203 -
15556064-15556561,15557537-15557581,15557852-15558258,
15558538-15558841,15559421-15560757,15561492-15561750
Length = 949
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 71 FDKSKLHQTQNPFEISDKPSKIIGEEENGISAEITE 178
FD++K+ +NP E +D +K G + GI+A + E
Sbjct: 707 FDRTKMRAYENPDEFADALAK--GSQNGGIAAVVHE 740
>05_03_0408 +
13601576-13601748,13601795-13602104,13602597-13602834,
13603014-13603364,13603457-13603542,13603685-13603759,
13604241-13604542,13605359-13605622,13606032-13606806
Length = 857
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 348 GLAEAISTLIWVAPRMHTDV 407
GL E +STLIW A +H V
Sbjct: 687 GLVETLSTLIWTASALHAAV 706
>02_05_0036 -
25292150-25293124,25294021-25294206,25294704-25294874,
25295135-25295353,25295461-25295712,25295802-25295903,
25296487-25296684,25296762-25297046,25297640-25297709,
25297797-25297970,25298825-25298952,25299059-25299163,
25299686-25300030,25300361-25300563,25300964-25301045,
25301667-25301744
Length = 1190
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 408 QELKIISDLLTAKYGKVYADACRGENVNTISDKLKHKMSVHSPPKILVEKYLIEIAKNYN 587
Q K S LT KV+ GE+++ +DK M S K+L+E Y + I ++ +
Sbjct: 128 QRYKDFSPCLTQGLLKVFFPGKSGEDLD--ADKNSRAMKKRSTLKLLIELYFVGIVEDAS 185
Query: 588 V 590
+
Sbjct: 186 I 186
>01_06_0684 +
31196825-31197252,31199189-31199291,31199402-31199512,
31199614-31199697,31199915-31199986,31200073-31200129,
31200427-31200546,31201301-31201324,31201953-31202063,
31202165-31202202,31202287-31202443,31202700-31202801,
31202878-31202934,31203113-31203259,31203429-31203499,
31203582-31203669,31203810-31203866,31203996-31204193
Length = 674
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 333 KELDEGLAEAISTLIWVAPRMHTDVQELKI 422
+E + GL EA++ L+ PRM D+ K+
Sbjct: 284 RETENGLVEAVAVLVSTMPRMRPDLPSGKL 313
>10_08_1065 -
22640931-22641114,22641213-22641334,22641512-22641633,
22663988-22664051,22664789-22664878,22665039-22665125,
22665221-22665363,22665400-22665421
Length = 277
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +3
Query: 498 SDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTPDE 608
S + M ++ PP++ ++YL++ A+ ++ + PDE
Sbjct: 41 SSSISTDMPLYEPPEVSFDEYLLDCARMFHAMF-PDE 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,598,320
Number of Sequences: 37544
Number of extensions: 270482
Number of successful extensions: 804
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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