Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e08
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 205 2e-53
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 205 2e-53
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 205 2e-53
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 205 2e-53
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 35 0.054
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 35 0.054
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 35 0.054
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 33 0.17
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 32 0.29
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 32 0.29
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 32 0.38
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 30 1.2
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 30 1.2
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 30 1.2
AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 30 1.2
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 29 2.0
Z35719-3|CAA84797.1| 347|Caenorhabditis elegans Hypothetical pr... 29 2.7
L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein ( Caeno... 28 4.7
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 27 8.2
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 205 bits (501), Expect = 2e-53
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Frame = +3
Query: 72 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIRE 251
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHIIRE
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHIIRE 63
Query: 252 DYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISD 431
DY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K ISD
Sbjct: 64 DYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTISD 123
Query: 432 LLTAKYGKVYADACRGENVN---TISDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTP 602
LT KYGK +A+A R + ++ K+ K+ +PPK+LVE+Y+IEIA V + P
Sbjct: 124 QLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEIAAAAGVPFVP 183
Query: 603 DEXVMR 620
D VMR
Sbjct: 184 DPDVMR 189
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 205 bits (501), Expect = 2e-53
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Frame = +3
Query: 72 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIRE 251
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHIIRE
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHIIRE 63
Query: 252 DYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISD 431
DY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K ISD
Sbjct: 64 DYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTISD 123
Query: 432 LLTAKYGKVYADACRGENVN---TISDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTP 602
LT KYGK +A+A R + ++ K+ K+ +PPK+LVE+Y+IEIA V + P
Sbjct: 124 QLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEIAAAAGVPFVP 183
Query: 603 DEXVMR 620
D VMR
Sbjct: 184 DPDVMR 189
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 205 bits (501), Expect = 2e-53
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Frame = +3
Query: 72 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIRE 251
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHIIRE
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHIIRE 63
Query: 252 DYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISD 431
DY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K ISD
Sbjct: 64 DYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTISD 123
Query: 432 LLTAKYGKVYADACRGENVN---TISDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTP 602
LT KYGK +A+A R + ++ K+ K+ +PPK+LVE+Y+IEIA V + P
Sbjct: 124 QLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEIAAAAGVPFVP 183
Query: 603 DEXVMR 620
D VMR
Sbjct: 184 DPDVMR 189
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 205 bits (501), Expect = 2e-53
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Frame = +3
Query: 72 STNPNYTKLKTHLRLAINRXXXXXXXXXXXAQKSRKEIAEYIASGKSERAKIRVEHIIRE 251
S Y KLKT+LRL INR A K+R EIA+YIA+ K +RA+IRVEHIIRE
Sbjct: 4 SWGAQYPKLKTNLRLGINRLQLLGKKKTEMAMKARTEIADYIAANKPDRARIRVEHIIRE 63
Query: 252 DYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISD 431
DY+VEA EI+EMYCDL+LARFGL+ QMK LD+G+AEA+ +++W APR+ TD+ E K ISD
Sbjct: 64 DYVVEAFEILEMYCDLLLARFGLIEQMKTLDDGIAEAVISIMWAAPRLATDIAEFKTISD 123
Query: 432 LLTAKYGKVYADACRGENVN---TISDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTP 602
LT KYGK +A+A R + ++ K+ K+ +PPK+LVE+Y+IEIA V + P
Sbjct: 124 QLTIKYGKPFAEAARANQLEFPARVNPKIISKLGAAAPPKLLVERYMIEIAAAAGVPFVP 183
Query: 603 DEXVMR 620
D VMR
Sbjct: 184 DPDVMR 189
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 381 VAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNTISDK-------LKHKMSVHSPP 539
+A ++H + ++ IS ++ A +G Y G ++ SD+ +K K V P
Sbjct: 1484 IAEKLHPSLLKVSPISTIIIATFGASYIRNISGAGDDSDSDRHISYNDIMKFKCLVELNP 1543
Query: 540 KILVEKYLIEIAKNYNVEYTPDEXVMR 620
KILV K + +A N V+Y + + R
Sbjct: 1544 KILVTKMAVNLA-NQMVKYKMSDKISR 1569
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 381 VAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNTISDK-------LKHKMSVHSPP 539
+A ++H + ++ IS ++ A +G Y G ++ SD+ +K K V P
Sbjct: 1490 IAEKLHPSLLKVSPISTIIIATFGASYIRNISGAGDDSDSDRHISYNDIMKFKCLVELNP 1549
Query: 540 KILVEKYLIEIAKNYNVEYTPDEXVMR 620
KILV K + +A N V+Y + + R
Sbjct: 1550 KILVTKMAVNLA-NQMVKYKMSDKISR 1575
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 381 VAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNTISDK-------LKHKMSVHSPP 539
+A ++H + ++ IS ++ A +G Y G ++ SD+ +K K V P
Sbjct: 1490 IAEKLHPSLLKVSPISTIIIATFGASYIRNISGAGDDSDSDRHISYNDIMKFKCLVELNP 1549
Query: 540 KILVEKYLIEIAKNYNVEYTPDEXVMR 620
KILV K + +A N V+Y + + R
Sbjct: 1550 KILVTKMAVNLA-NQMVKYKMSDKISR 1575
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 381 VAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNTISDK-------LKHKMSVHSPP 539
+A ++H + ++ IS ++ A +G Y G ++ SD+ +K K V P
Sbjct: 1490 IAEKLHPSLLKVSPISTIIIATFGASYIRNISGAGDDSDSDRHISYNDIMKFKCLVELNP 1549
Query: 540 KILVEKYLIEIAKNYNVEYTPDEXVMR 620
KILV K + +A N V+Y + + R
Sbjct: 1550 KILVTKMAVNLA-NQMVKYKMSDKISR 1575
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 17 FVGITKIIAKKLLENKDVFDKSKLHQTQNPFEISDKPSKIIGEEENGISAEITERD 184
F K++AKK ENKD + S T++P + +K +K EEE AE E++
Sbjct: 90 FFRAKKLVAKKK-ENKDKGNDSSAEVTKSPKGVVEKRNKKAKEEETATEAEGDEKE 144
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
resistance related protein2 protein.
Length = 1525
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 8 FFWFVGITKIIAKKLLENKDVFDKSKLHQTQN 103
F WF G+ + KK LEN+D++D +++ + +N
Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
resistance protein familyprotein 2 protein.
Length = 1525
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 8 FFWFVGITKIIAKKLLENKDVFDKSKLHQTQN 103
F WF G+ + KK LEN+D++D +++ + +N
Sbjct: 220 FQWFTGLAYLGNKKSLENEDLWDLNEIDKAEN 251
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 499 LIVFTFSPLHASAYTFPYFAVSKSDIIFNSCTSVCILGATHIRVDIASARPSSSSF 332
L +F+FSP H+ + F +F+ + + FNS + ++ +R+ I+ P SSF
Sbjct: 256 LFLFSFSP-HSKSMFFFFFSCVSAPLSFNSAHIFLVCSSSLVRLHISLFLPIFSSF 310
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 41 AKKLLENKDVFDKSKLHQTQNPFEISDKPSKIIGEEENGISAEITERD 184
AKK L + + K NP+++S + K+ EE+ + ++TE D
Sbjct: 846 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 893
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 41 AKKLLENKDVFDKSKLHQTQNPFEISDKPSKIIGEEENGISAEITERD 184
AKK L + + K NP+++S + K+ EE+ + ++TE D
Sbjct: 849 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 896
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 41 AKKLLENKDVFDKSKLHQTQNPFEISDKPSKIIGEEENGISAEITERD 184
AKK L + + K NP+++S + K+ EE+ + ++TE D
Sbjct: 848 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 895
>AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 978
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 41 AKKLLENKDVFDKSKLHQTQNPFEISDKPSKIIGEEENGISAEITERD 184
AKK L + + K NP+++S + K+ EE+ + ++TE D
Sbjct: 774 AKKYLVHMQFGNNKKGSHDNNPYDLSAEERKVWEEEQLALQLDLTEND 821
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/120 (22%), Positives = 51/120 (42%)
Frame = +3
Query: 180 EIAEYIASGKSERAKIRVEHIIREDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAE 359
E + +A E+ + R+ + ++D +A + VEM D + LV M++ E AE
Sbjct: 104 EFQKNLADNDVEKVRQRIGEL-KKDLDEKARKNVEMGEDDC---YKLVKPMRKRREIEAE 159
Query: 360 AISTLIWVAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNTISDKLKHKMSVHSPP 539
+ W+ P H D+ LK + ++ K + T+ ++ K K + P
Sbjct: 160 FQDFVKWMTPEQHGDINALKTVRKDSSSDKVKELLSKLPADQQKTLYEEFKGKCKGYFTP 219
>Z35719-3|CAA84797.1| 347|Caenorhabditis elegans Hypothetical
protein F17C8.5 protein.
Length = 347
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 506 FVTYCVHILASTCISIYLSIFCSEQVRYYF 417
F YC+ L S +S + FC +VRY+F
Sbjct: 257 FSGYCMLFLISDVLSNQIFYFCQARVRYFF 286
>L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc4, complete
cds. ).
Length = 537
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 ITKIIAKKLLENKDVFDKSKLHQTQNP-FEISD-KPSKIIGEEENGISAEI 172
+TK + +K L NKD K+ +N EIS+ PS + ++ GI E+
Sbjct: 219 VTKFVTRKCLINKDAIKKNADDFVKNARTEISNYHPSMVFNCDQTGIQKEL 269
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 RKEIAEYIASGK-SERAKIRVEHIIREDYMVEAMEIVEMYCDLI 302
+ ++ EY+ + K E A+I ++H + +DY E + + + CD +
Sbjct: 167 KSKVQEYLENQKFKEAAEIVMKHEVVDDYSFEQITLPLILCDKV 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,422,416
Number of Sequences: 27780
Number of extensions: 267096
Number of successful extensions: 897
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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