BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12e08 (624 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4 EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4 DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 23 2.4 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.4 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.4 L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 23 3.2 DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 4.2 DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 7.4 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.8 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 344 NVLDIDDDIRHKNSAANPP 362 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 344 NVLDIDDDIRHKNSAANPP 362 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 344 NVLDIDDDIRHKNSAANPP 362 >EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 461 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 344 NVLDIDDDIRHKNSAANPP 362 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 344 NVLDIDDDIRHKNSAANPP 362 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 344 NVLDIDDDIRHKNSAANPP 362 >DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor protein. Length = 128 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +2 Query: 119 DKPSKIIGEEENGISAEITE 178 D I G+EENG+++E T+ Sbjct: 81 DSIHSIDGDEENGLTSESTD 100 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 412 NVLDIDDDIRHKNSAANPP 430 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 483 NVNTISDKLKHKMSVHSPP 539 NV I D ++HK S +PP Sbjct: 412 NVLDIDDDIRHKNSAANPP 430 >L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein protein. Length = 69 Score = 22.6 bits (46), Expect = 3.2 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 1/23 (4%) Frame = -1 Query: 531 CAQ-TFCASICHLLCSHSRLYMH 466 CA T+ CH L H R Y H Sbjct: 47 CANCTYATKYCHSLKLHLRKYSH 69 >DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor protein. Length = 157 Score = 22.2 bits (45), Expect = 4.2 Identities = 8/15 (53%), Positives = 13/15 (86%) Frame = +2 Query: 134 IIGEEENGISAEITE 178 I G+EENG+++E T+ Sbjct: 115 IDGDEENGLTSESTD 129 >DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein protein. Length = 250 Score = 21.4 bits (43), Expect = 7.4 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = +2 Query: 224 NKSGAHNKRGLHG 262 N++G H GLHG Sbjct: 130 NQTGLHGLHGLHG 142 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.0 bits (42), Expect = 9.8 Identities = 7/21 (33%), Positives = 13/21 (61%) Frame = -3 Query: 580 FLAISMRYFSTNILGGLCTDI 518 FL + +F+ NI+ +CT + Sbjct: 628 FLICWLPFFTCNIMDAICTKL 648 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 160,019 Number of Sequences: 438 Number of extensions: 2996 Number of successful extensions: 15 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18582456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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