BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12e06 (559 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P63272 Cluster: Transcription elongation factor SPT4; n... 193 3e-48 UniRef50_Q9TZ93 Cluster: Transcription elongation factor SPT4; n... 148 1e-34 UniRef50_Q7S743 Cluster: Transcription elongation factor spt-4; ... 123 2e-27 UniRef50_Q5KB83 Cluster: Transcription elongation factor SPT4; n... 119 4e-26 UniRef50_A1CZA0 Cluster: Transcriptional elongation protein Spt4... 118 9e-26 UniRef50_Q4WU00 Cluster: Transcription elongation factor spt4; n... 111 8e-24 UniRef50_P63271-2 Cluster: Isoform 2 of P63271 ; n=1; Mus muscul... 107 1e-22 UniRef50_Q8SR92 Cluster: TRANSCRIPTION INITIATION PROTEIN; n=1; ... 105 5e-22 UniRef50_A2R9C7 Cluster: Cofactor: SPT4 of S. cerevisiae require... 101 2e-20 UniRef50_A3LNS8 Cluster: Predicted protein; n=2; Ascomycota|Rep:... 100 5e-20 UniRef50_Q94C60 Cluster: Transcription elongation factor SPT4 ho... 92 7e-18 UniRef50_P63271-3 Cluster: Isoform 3 of P63271 ; n=2; Eutheria|R... 91 1e-17 UniRef50_Q4I5W5 Cluster: Transcription elongation factor SPT4; n... 89 5e-17 UniRef50_Q4YU95 Cluster: Transcription factor, putative; n=5; Pl... 89 6e-17 UniRef50_P32914 Cluster: Transcription elongation factor SPT4; n... 85 1e-15 UniRef50_Q9P7K8 Cluster: Transcription elongation factor spt4; n... 83 3e-15 UniRef50_Q01ET3 Cluster: Spt4 Transcription elongation factor SP... 82 7e-15 UniRef50_Q4N8C8 Cluster: Transcription factor, putative; n=1; Th... 81 1e-14 UniRef50_P81205 Cluster: Transcription elongation factor SPT4; n... 80 3e-14 UniRef50_Q6FMX1 Cluster: Transcription elongation factor SPT4; n... 79 5e-14 UniRef50_A3FQ88 Cluster: Transcription factor, putative; n=1; Cr... 72 1e-11 UniRef50_Q54NF2 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10 UniRef50_UPI00004996AC Cluster: transcription initiation protein... 61 1e-08 UniRef50_A2FSB6 Cluster: Transcription initiation protein, putat... 60 3e-08 UniRef50_A7AWE9 Cluster: Transcription factor, putative; n=1; Ba... 58 2e-07 UniRef50_Q4UH88 Cluster: Possible transcription initiation prote... 52 4e-07 UniRef50_UPI000155CED1 Cluster: PREDICTED: similar to MGC84906 p... 56 7e-07 UniRef50_Q4DFX6 Cluster: Putative uncharacterized protein; n=2; ... 46 8e-04 UniRef50_Q38D81 Cluster: Putative uncharacterized protein; n=1; ... 41 0.017 UniRef50_A0CZM1 Cluster: Chromosome undetermined scaffold_32, wh... 38 0.12 UniRef50_A0MNM7 Cluster: Homogentisate 1,2-dioxygenase; n=1; Sus... 35 1.5 UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1... 35 1.5 UniRef50_O01564 Cluster: Putative uncharacterized protein; n=2; ... 34 2.0 UniRef50_Q2TUU7 Cluster: Thyroid hormone receptor alpha; n=5; Sc... 33 3.4 UniRef50_A7RX02 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.4 UniRef50_Q92093 Cluster: Vitellogenin precursor (VTG) [Contains:... 33 3.4 UniRef50_Q9XXQ9 Cluster: Putative uncharacterized protein hmit-1... 33 4.5 UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2; Sch... 33 4.5 UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear re... 33 6.0 UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n... 32 7.9 UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7; ... 32 7.9 UniRef50_Q93099 Cluster: Homogentisate 1,2-dioxygenase; n=85; ce... 32 7.9 >UniRef50_P63272 Cluster: Transcription elongation factor SPT4; n=31; Eumetazoa|Rep: Transcription elongation factor SPT4 - Homo sapiens (Human) Length = 117 Score = 193 bits (470), Expect = 3e-48 Identities = 79/114 (69%), Positives = 103/114 (90%) Frame = +2 Query: 125 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 304 M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+ Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60 Query: 305 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466 IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+ Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 114 >UniRef50_Q9TZ93 Cluster: Transcription elongation factor SPT4; n=4; Bilateria|Rep: Transcription elongation factor SPT4 - Caenorhabditis elegans Length = 120 Score = 148 bits (358), Expect = 1e-34 Identities = 63/116 (54%), Positives = 89/116 (76%), Gaps = 2/116 (1%) Frame = +2 Query: 137 TVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVM 316 +VP +LR LRACL+CSL+K+ + F+ EGC+NC++ L +K +++ VYDCTS N+DGMIA M Sbjct: 4 SVPADLRNLRACLLCSLVKSVESFQKEGCENCEDVLHLKGDEEKVYDCTSANYDGMIAAM 63 Query: 317 NPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP--RDTSQR*K 478 + +SWVCKWQ++ R KG+YAISVSG LP ++ E+KS G+ Y+P RD S + K Sbjct: 64 SNNESWVCKWQKMQRKVKGMYAISVSGVLPNNIVSELKSLGVRYKPNQRDYSTQFK 119 >UniRef50_Q7S743 Cluster: Transcription elongation factor spt-4; n=4; Pezizomycotina|Rep: Transcription elongation factor spt-4 - Neurospora crassa Length = 120 Score = 123 bits (297), Expect = 2e-27 Identities = 52/108 (48%), Positives = 73/108 (67%) Frame = +2 Query: 143 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNP 322 P + R LRAC+VCS++ T+ +F EGC NC++FL ++ + D + CTS F+G+I + NP Sbjct: 8 PGQQRYLRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEGIITIANP 67 Query: 323 EDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466 + SWV KWQR+ + KGVYA VSG+LP V ++ GI Y PRD S Sbjct: 68 QKSWVAKWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIPRDGS 115 >UniRef50_Q5KB83 Cluster: Transcription elongation factor SPT4; n=1; Filobasidiella neoformans|Rep: Transcription elongation factor SPT4 - Cryptococcus neoformans (Filobasidiella neoformans) Length = 113 Score = 119 bits (287), Expect = 4e-26 Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Frame = +2 Query: 143 PKELRG-LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMN 319 PK R LRACLVCS++++ + F +GC NC++ L M+ + + V +CTS +DGMIA++ Sbjct: 3 PKSGRAELRACLVCSILQSTNDFLTQGCPNCEDILEMRGSAERVAECTSLLYDGMIAMIE 62 Query: 320 PEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRD 460 P +SWV +WQRI + +G+YA+ V+GR P VI +++RG YRPRD Sbjct: 63 PSESWVARWQRIDKRMRGIYAVRVTGRAPQDVIDAIEARGGVYRPRD 109 >UniRef50_A1CZA0 Cluster: Transcriptional elongation protein Spt4, putative; n=5; Pezizomycotina|Rep: Transcriptional elongation protein Spt4, putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)) Length = 122 Score = 118 bits (284), Expect = 9e-26 Identities = 49/113 (43%), Positives = 70/113 (61%) Frame = +2 Query: 128 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMI 307 S P + R LRAC+VCSL++ +F EGC NCD L ++ N D + +CTS F+G+I Sbjct: 4 SFYVAPSQQRTLRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGLI 63 Query: 308 AVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466 + +P SWV +WQR+ + G YA+ V+G LP VI ++ G+ Y PRD S Sbjct: 64 TLRDPTTSWVARWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVKYIPRDGS 116 >UniRef50_Q4WU00 Cluster: Transcription elongation factor spt4; n=2; Aspergillus|Rep: Transcription elongation factor spt4 - Aspergillus fumigatus (Sartorya fumigata) Length = 156 Score = 111 bits (268), Expect = 8e-24 Identities = 45/109 (41%), Positives = 67/109 (61%) Frame = +2 Query: 128 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMI 307 S P + R LRAC+VCSL++ +F +GC NCD L ++ N D + +CTS F+G+I Sbjct: 4 SYYVTPSQQRTLRACMVCSLVQLHSKFMRDGCPNCDNVLGLRGNNDAIQECTSQVFEGLI 63 Query: 308 AVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP 454 + +P SWV +WQR+ + G YA+ V+G LP VI ++ G+ Y P Sbjct: 64 TLRDPSTSWVARWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVRYIP 112 >UniRef50_P63271-2 Cluster: Isoform 2 of P63271 ; n=1; Mus musculus|Rep: Isoform 2 of P63271 - Mus musculus (Mouse) Length = 87 Score = 107 bits (258), Expect = 1e-22 Identities = 43/62 (69%), Positives = 56/62 (90%) Frame = +2 Query: 125 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 304 M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGC 60 Query: 305 IA 310 +A Sbjct: 61 LA 62 >UniRef50_Q8SR92 Cluster: TRANSCRIPTION INITIATION PROTEIN; n=1; Encephalitozoon cuniculi|Rep: TRANSCRIPTION INITIATION PROTEIN - Encephalitozoon cuniculi Length = 116 Score = 105 bits (253), Expect = 5e-22 Identities = 49/102 (48%), Positives = 65/102 (63%) Frame = +2 Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340 LRACL CS IKT + F +GC+NC L MK N NV +CTS+ F G++A++ P +SWV Sbjct: 13 LRACLGCSQIKTLNGFRKDGCENCP-MLNMKGNVTNVSECTSSKFKGVVALLQPSNSWVG 71 Query: 341 KWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466 KWQRI F KG+YA+ V G L I++++ G Y R S Sbjct: 72 KWQRIGEFRKGLYAMVVEGALSEDFIKDLEQHGRIYYERTES 113 >UniRef50_A2R9C7 Cluster: Cofactor: SPT4 of S. cerevisiae requires metal binding for its function; n=1; Aspergillus niger|Rep: Cofactor: SPT4 of S. cerevisiae requires metal binding for its function - Aspergillus niger Length = 100 Score = 101 bits (241), Expect = 2e-20 Identities = 39/91 (42%), Positives = 58/91 (63%) Frame = +2 Query: 125 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 304 MS P + R LRAC+VCSL++ +F EGC NCD L ++ N D + +CTS F+G+ Sbjct: 1 MSFYVAPSQQRTLRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGL 60 Query: 305 IAVMNPEDSWVCKWQRISRFCKGVYAISVSG 397 + + +P SWV +WQR+ + G YA+ V+G Sbjct: 61 VTLRDPTTSWVARWQRLDSYVPGTYAVKVTG 91 >UniRef50_A3LNS8 Cluster: Predicted protein; n=2; Ascomycota|Rep: Predicted protein - Pichia stipitis (Yeast) Length = 112 Score = 99.5 bits (237), Expect = 5e-20 Identities = 41/106 (38%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDN-VYDCTSNNFDGMIAV-MNPED 328 R RAC++C +++ +F GC NC+ L + N++ V DCTS +F+G++A+ + + Sbjct: 4 RSERACMLCGIVQPMKRFVDYGCPNCESLLHFQDNEEGQVQDCTSPSFEGLVALGQDNRN 63 Query: 329 SWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466 SWV +W RI F G+YA+ V+G+LP +I +++++ + YRPRD S Sbjct: 64 SWVARWLRIDSFNPGLYAVKVNGKLPPHIISDLEAQDVIYRPRDGS 109 >UniRef50_Q94C60 Cluster: Transcription elongation factor SPT4 homolog 2; n=9; Spermatophyta|Rep: Transcription elongation factor SPT4 homolog 2 - Arabidopsis thaliana (Mouse-ear cress) Length = 116 Score = 92.3 bits (219), Expect = 7e-18 Identities = 38/82 (46%), Positives = 56/82 (68%) Frame = +2 Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340 LRACL C L+KT+DQF GC+NC F +M+ + + + + T+ NF+G+I+VM+P SW Sbjct: 16 LRACLRCRLVKTYDQFRDAGCENCP-FFKMEEDHERIVEVTTPNFNGIISVMDPSRSWAA 74 Query: 341 KWQRISRFCKGVYAISVSGRLP 406 +W RI +F G Y ++VS LP Sbjct: 75 RWLRIGKFAPGCYTLAVSEPLP 96 >UniRef50_P63271-3 Cluster: Isoform 3 of P63271 ; n=2; Eutheria|Rep: Isoform 3 of P63271 - Mus musculus (Mouse) Length = 99 Score = 91.5 bits (217), Expect = 1e-17 Identities = 37/55 (67%), Positives = 49/55 (89%) Frame = +2 Query: 302 MIAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466 +IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+ Sbjct: 42 IIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 96 >UniRef50_Q4I5W5 Cluster: Transcription elongation factor SPT4; n=1; Gibberella zeae|Rep: Transcription elongation factor SPT4 - Gibberella zeae (Fusarium graminearum) Length = 99 Score = 89.4 bits (212), Expect = 5e-17 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%) Frame = +2 Query: 194 TFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQRISRFCKG 373 T +F+ EGC NC+EFL ++ + D + CTS F+G+I + NP SW+ K+QR+ + G Sbjct: 2 TSQRFQNEGCPNCEEFLHLQHSPDQIESCTSQVFEGVITLANPTKSWIAKYQRLDSYVPG 61 Query: 374 VYAISVSGRLPAGVIREMKSR-GIAYRPRDTSQ 469 +YAI VSG+LP V ++ I Y PRD ++ Sbjct: 62 MYAIKVSGQLPDDVRSTLEDEYRIQYIPRDGTE 94 >UniRef50_Q4YU95 Cluster: Transcription factor, putative; n=5; Plasmodium|Rep: Transcription factor, putative - Plasmodium berghei Length = 136 Score = 89.0 bits (211), Expect = 6e-17 Identities = 39/91 (42%), Positives = 58/91 (63%) Frame = +2 Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340 LRACL C L++T +F GC NC +FL+M ++ + DCT+ NF G IA+ P SW+ Sbjct: 46 LRACLSCRLLRTEAEFYQNGCSNC-KFLQMTGDRHRIQDCTTENFSGFIAITTPTKSWIA 104 Query: 341 KWQRISRFCKGVYAISVSGRLPAGVIREMKS 433 ++ +S++ G YA+ V G LP IR++KS Sbjct: 105 QYNDLSKYNPGFYALQVVGELPES-IRDLKS 134 >UniRef50_P32914 Cluster: Transcription elongation factor SPT4; n=11; Saccharomycetales|Rep: Transcription elongation factor SPT4 - Saccharomyces cerevisiae (Baker's yeast) Length = 102 Score = 85.0 bits (201), Expect = 1e-15 Identities = 38/102 (37%), Positives = 58/102 (56%) Frame = +2 Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343 RAC++C +++T ++F +GC NC + +CTS +F+G++ + P SWV K Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGIFEEAGV--STMECTSPSFEGLVGMCKPTKSWVAK 62 Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQ 469 W + G+YAI V GRLPA V+ + Y+PRD SQ Sbjct: 63 WLSVDHSIAGMYAIKVDGRLPAEVVELLPH----YKPRDGSQ 100 >UniRef50_Q9P7K8 Cluster: Transcription elongation factor spt4; n=1; Schizosaccharomyces pombe|Rep: Transcription elongation factor spt4 - Schizosaccharomyces pombe (Fission yeast) Length = 105 Score = 83.4 bits (197), Expect = 3e-15 Identities = 40/99 (40%), Positives = 57/99 (57%) Frame = +2 Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343 RACL+C ++ F +GC N D+V TS F+G++A+M+P +SWV + Sbjct: 10 RACLICGIVLPHSVFANKGCPN--------DGVDDVETFTSPVFEGIMAMMSPTESWVAR 61 Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRD 460 WQRI F G+YA V G L V+ ++ RGI YRPR+ Sbjct: 62 WQRIDTFTPGIYATRVQGVLNEDVVESLRRRGINYRPRN 100 >UniRef50_Q01ET3 Cluster: Spt4 Transcription elongation factor SPT4; n=2; Ostreococcus|Rep: Spt4 Transcription elongation factor SPT4 - Ostreococcus tauri Length = 115 Score = 82.2 bits (194), Expect = 7e-15 Identities = 32/81 (39%), Positives = 57/81 (70%), Gaps = 1/81 (1%) Frame = +2 Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPED-SWVC 340 RAC+ C L+KTFDQF +GC+NC + L +K +++ V +CT+ ++ G++++++ E+ SWV Sbjct: 25 RACIGCKLVKTFDQFIEDGCENC-QHLALKDDRERVSECTTTSYSGVVSLLSDENASWVG 83 Query: 341 KWQRISRFCKGVYAISVSGRL 403 KW + ++ G YA+ + G L Sbjct: 84 KWLHLGKYACGCYALQLQGSL 104 >UniRef50_Q4N8C8 Cluster: Transcription factor, putative; n=1; Theileria parva|Rep: Transcription factor, putative - Theileria parva Length = 140 Score = 81.4 bits (192), Expect = 1e-14 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%) Frame = +2 Query: 161 LRACLVCSLIKTFDQFE---YE-GCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPED 328 LRAC+ C LI + DQ YE GC NC FL+M + DCTS NF+G I++M+P+ Sbjct: 47 LRACISCRLIMSEDQVSVTFYENGCGNCS-FLQMDGDHRRTLDCTSANFNGFISIMDPQK 105 Query: 329 SWVCKWQRISRFCKGVYAISVSGRLPAGVIREM 427 SW ++ +S G YAISV+G LP + E+ Sbjct: 106 SWSARYNNLSDLIPGCYAISVNGTLPESIKDEL 138 >UniRef50_P81205 Cluster: Transcription elongation factor SPT4; n=2; Saccharomycetaceae|Rep: Transcription elongation factor SPT4 - Kluyveromyces lactis (Yeast) (Candida sphaerica) Length = 102 Score = 80.2 bits (189), Expect = 3e-14 Identities = 35/102 (34%), Positives = 55/102 (53%) Frame = +2 Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343 RAC++C L+++ +F GC NC + +CTS +F+G++ + P SWV + Sbjct: 5 RACMLCGLVQSTAEFNRNGCPNCQSIFEEAGV--SAVECTSPSFEGLVGMCKPSRSWVAR 62 Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQ 469 W I + G+YA+ + GRLP V + Y+PRD SQ Sbjct: 63 WMSIDSYIPGMYAVKIDGRLPIEVTELLPH----YKPRDGSQ 100 >UniRef50_Q6FMX1 Cluster: Transcription elongation factor SPT4; n=2; Saccharomycetales|Rep: Transcription elongation factor SPT4 - Candida glabrata (Yeast) (Torulopsis glabrata) Length = 102 Score = 79.4 bits (187), Expect = 5e-14 Identities = 36/102 (35%), Positives = 56/102 (54%) Frame = +2 Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343 RAC++C +++T ++F GC NC + +CTS +F+G++ + P SWV K Sbjct: 5 RACMLCGIVQTTNEFGRVGCPNCQGIFEEAGV--STMECTSPSFEGLVGMCKPTKSWVAK 62 Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQ 469 W + G+YA+ V GRLP V+ + Y+PRD SQ Sbjct: 63 WLSVDANIPGMYAVKVDGRLPPEVVELLPH----YKPRDGSQ 100 >UniRef50_A3FQ88 Cluster: Transcription factor, putative; n=1; Cryptosporidium parvum Iowa II|Rep: Transcription factor, putative - Cryptosporidium parvum Iowa II Length = 124 Score = 71.7 bits (168), Expect = 1e-11 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%) Frame = +2 Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340 LRACL C +I + QF GC NC L M+ ++ V CTS +F GMI+++ P +SWV Sbjct: 32 LRACLSCRIILSDQQFYEGGCPNCTH-LAMEFDRQKVNSCTSMSFKGMISMLKPNESWVA 90 Query: 341 KWQR-ISRFCKGVYAISVSG 397 ++ + + G YA+SVSG Sbjct: 91 RYNKLLPNIVPGCYAVSVSG 110 >UniRef50_Q54NF2 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 91 Score = 67.7 bits (158), Expect = 2e-10 Identities = 32/84 (38%), Positives = 50/84 (59%) Frame = +2 Query: 140 VPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMN 319 VP + RAC C L+K+ QFE GC+NC S+ + T+ NF+G+IA+MN Sbjct: 12 VPSSFKHARACTECGLVKSAQQFEDNGCENCS------SSSSS----TTQNFEGIIAIMN 61 Query: 320 PEDSWVCKWQRISRFCKGVYAISV 391 P++SW+ + + R G+YA+S+ Sbjct: 62 PKESWIARRLQFERRVPGLYALSM 85 >UniRef50_UPI00004996AC Cluster: transcription initiation protein SPT4; n=1; Entamoeba histolytica HM-1:IMSS|Rep: transcription initiation protein SPT4 - Entamoeba histolytica HM-1:IMSS Length = 128 Score = 61.3 bits (142), Expect = 1e-08 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Frame = +2 Query: 140 VPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMN 319 +P LR C +C LIK+ +QF+ +GCDNC + DN D S+NF GM++++ Sbjct: 26 IPSNFNTLRCCKICGLIKSQEQFQRDGCDNCKRYF------DNWEDYVSSNFTGMLSLLR 79 Query: 320 PEDSWVCKWQRI-SRFCKGVYAIS 388 P+ S++ K + + G+YA S Sbjct: 80 PDRSFIGKVLGMKDTYVCGLYAAS 103 >UniRef50_A2FSB6 Cluster: Transcription initiation protein, putative; n=1; Trichomonas vaginalis G3|Rep: Transcription initiation protein, putative - Trichomonas vaginalis G3 Length = 123 Score = 60.1 bits (139), Expect = 3e-08 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Frame = +2 Query: 137 TVPKELRGLRACLVCSLIKTFDQFEYEG-CDNCDEFLRMKSNKDNVYDCTSNNFDGMIAV 313 T+PK+ R + AC+ C LI+ D +++E C NC + SN+F+G++A+ Sbjct: 8 TLPKKSRSMAACIGCGLIQDRDVWKHETTCPNCGW------TATEIDSWVSNSFNGILAL 61 Query: 314 MNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRG 439 P+ SW W + ++ G+Y I G + +++ ++S G Sbjct: 62 FQPQKSWCSSWLKYNKNVPGIYCIDNLGEVTDTIVQHLESYG 103 >UniRef50_A7AWE9 Cluster: Transcription factor, putative; n=1; Babesia bovis|Rep: Transcription factor, putative - Babesia bovis Length = 136 Score = 57.6 bits (133), Expect = 2e-07 Identities = 31/85 (36%), Positives = 44/85 (51%) Frame = +2 Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340 LRACL C LI + DQ M ++ DCT+ NF G++++M+P+ SW Sbjct: 60 LRACLSCRLIMSEDQ--------------MDGDRRRTLDCTTANFSGLLSIMDPQKSWAA 105 Query: 341 KWQRISRFCKGVYAISVSGRLPAGV 415 ++ + G YAISV G LP V Sbjct: 106 RYNSLVDVIPGCYAISVVGELPESV 130 >UniRef50_Q4UH88 Cluster: Possible transcription initiation protein spt4-like, putatve; n=1; Theileria annulata|Rep: Possible transcription initiation protein spt4-like, putatve - Theileria annulata Length = 230 Score = 52.4 bits (120), Expect(2) = 4e-07 Identities = 20/51 (39%), Positives = 33/51 (64%) Frame = +2 Query: 206 FEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQRIS 358 F GC NC FL+M + + DCTS+NF+G I++++P+ SW ++ +S Sbjct: 126 FYENGCGNCS-FLQMDGDHRRILDCTSSNFNGFISIIDPQKSWSARYNNLS 175 Score = 23.8 bits (49), Expect(2) = 4e-07 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 Query: 371 GVYAISVSGRLPAGVIREM 427 G YAISV+G LP + E+ Sbjct: 210 GCYAISVNGTLPESIKDEL 228 >UniRef50_UPI000155CED1 Cluster: PREDICTED: similar to MGC84906 protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to MGC84906 protein - Ornithorhynchus anatinus Length = 64 Score = 55.6 bits (128), Expect = 7e-07 Identities = 22/35 (62%), Positives = 30/35 (85%) Frame = +2 Query: 362 FCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466 F GVYA+SV+GRLP G++RE+KSRG+ Y+ RDT+ Sbjct: 27 FKPGVYAVSVTGRLPQGIVRELKSRGVVYKSRDTA 61 >UniRef50_Q4DFX6 Cluster: Putative uncharacterized protein; n=2; Trypanosoma cruzi|Rep: Putative uncharacterized protein - Trypanosoma cruzi Length = 218 Score = 45.6 bits (103), Expect = 8e-04 Identities = 25/76 (32%), Positives = 38/76 (50%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSW 334 RG AC C LI T QF +GC C ++D ++D T+ +F + ++ PE SW Sbjct: 77 RGYLACRQCRLILTETQFIRDGCSVCG---TGPVSRDELHDVTTADFSNFVGLIAPEKSW 133 Query: 335 VCKWQRISRFCKGVYA 382 V + + GV+A Sbjct: 134 VARMIGRTGCPNGVFA 149 >UniRef50_Q38D81 Cluster: Putative uncharacterized protein; n=1; Trypanosoma brucei|Rep: Putative uncharacterized protein - Trypanosoma brucei Length = 271 Score = 41.1 bits (92), Expect = 0.017 Identities = 24/75 (32%), Positives = 35/75 (46%) Frame = +2 Query: 158 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 337 G AC C LI T QF +EGC C +++ + D + F I ++ PE SWV Sbjct: 136 GYLACRRCRLIITEQQFLHEGCQVCG---TGPVSREELLDVATAEFSNFIGLIAPEKSWV 192 Query: 338 CKWQRISRFCKGVYA 382 + + GV+A Sbjct: 193 GRLINRTNCPNGVFA 207 >UniRef50_A0CZM1 Cluster: Chromosome undetermined scaffold_32, whole genome shotgun sequence; n=3; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_32, whole genome shotgun sequence - Paramecium tetraurelia Length = 94 Score = 38.3 bits (85), Expect = 0.12 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 2/86 (2%) Frame = +2 Query: 140 VPKELRGLRACLVCSLIKTFDQF-EYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVM 316 +PK+++ LRAC C L+ T +Q+ + C N +++ +Y G+I VM Sbjct: 18 IPKQIKDLRACQFCGLLLTLEQWNKITQCLN-----GCSADQTKIY-------SGVICVM 65 Query: 317 NPEDSWVCKWQRISR-FCKGVYAISV 391 P SWV K S+ G+YAI V Sbjct: 66 KPSKSWVIKKLGNSKNIHPGLYAIDV 91 >UniRef50_A0MNM7 Cluster: Homogentisate 1,2-dioxygenase; n=1; Sus scrofa|Rep: Homogentisate 1,2-dioxygenase - Sus scrofa (Pig) Length = 49 Score = 34.7 bits (76), Expect = 1.5 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -1 Query: 475 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 371 LS+A W + ++ L +YY CW+P ++ + NS Sbjct: 8 LSMAVTRWGLKTSNCLDENYYKCWEPLKSHFTPNS 42 >UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1; Tetrahymena thermophila SB210|Rep: EGF-like domain containing protein - Tetrahymena thermophila SB210 Length = 2328 Score = 34.7 bits (76), Expect = 1.5 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTS 286 C+VCS + +D Y+ C NC+ +KDN CTS Sbjct: 1309 CIVCSQSQVYDSVHYQ-CVNCNPTCLTCQDKDNTNKCTS 1346 Score = 33.9 bits (74), Expect = 2.6 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 158 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 G + C C L + D + C NCD R +KDN+ CTS N Sbjct: 946 GSKTCKSCQLNQVIDTIN-KICVNCDPSCRTCKDKDNLQACTSCN 989 >UniRef50_O01564 Cluster: Putative uncharacterized protein; n=2; Caenorhabditis|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 357 Score = 34.3 bits (75), Expect = 2.0 Identities = 28/106 (26%), Positives = 40/106 (37%) Frame = +2 Query: 119 SIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFD 298 S S E L G +AC+VC F CD C F R + Y C N Sbjct: 10 SSSSPEMFALNLTGQKACVVCKRPANCYNFGVMSCDACKMFFRRTMLLNVQYVCRRKN-- 67 Query: 299 GMIAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSR 436 +DS+ C R C+ V + V +L + E+K++ Sbjct: 68 -----QCFDDSFSCLKTPYCRACRLVQCVKVGMKLNLSAMLEVKNQ 108 >UniRef50_Q2TUU7 Cluster: Thyroid hormone receptor alpha; n=5; Schistosoma mansoni|Rep: Thyroid hormone receptor alpha - Schistosoma mansoni (Blood fluke) Length = 1115 Score = 33.5 bits (73), Expect = 3.4 Identities = 20/72 (27%), Positives = 30/72 (41%) Frame = +2 Query: 158 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 337 G C+VC T + C+ C F R K VY C ++G +V + ++ Sbjct: 198 GPEPCVVCGDNATGFHYRAMTCEGCKGFFRRSVQKKLVYTC---KYNGRCSVSDKQNRNS 254 Query: 338 CKWQRISRFCKG 373 C+ R R KG Sbjct: 255 CQKCRFDRCIKG 266 >UniRef50_A7RX02 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 334 Score = 33.5 bits (73), Expect = 3.4 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 3/99 (3%) Frame = -1 Query: 475 LSLAC-VPWAIGNTSTL-HFSYYTC-WQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN 305 +S AC +P+ + + L H Y+TC + P YCI+ +PF VF +H + Sbjct: 246 ISPACFIPFTVFHLHVLSHLLYFTCMFYPI---YCISPAC----FIPFT---VFHLHVLS 295 Query: 304 HSIKVITCAIIDIIFVTFHAKKFITIVTAFIFKLVKCLY 188 H + TC + F FH FI + L LY Sbjct: 296 HLL-YFTCMFYTVPFTVFHLHVFIPFTVFHLHVLSHLLY 333 >UniRef50_Q92093 Cluster: Vitellogenin precursor (VTG) [Contains: Lipovitellin I (LVI); Phosvitin (PV); Lipovitellin II (LVII)]; n=49; Elopocephala|Rep: Vitellogenin precursor (VTG) [Contains: Lipovitellin I (LVI); Phosvitin (PV); Lipovitellin II (LVII)] - Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri) Length = 1659 Score = 33.5 bits (73), Expect = 3.4 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = -1 Query: 412 TCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCNHSIKVITCAIIDIIFVTFHAKKF 236 T ++ N C F T+ PF + V +IHY + + C+++ TF+ KK+ Sbjct: 1348 TLYKLGVNLPCSLPFESMTDLSPFDDNIVNKIHYLFSEVNAVKCSMVRDTLTTFNNKKY 1406 >UniRef50_Q9XXQ9 Cluster: Putative uncharacterized protein hmit-1.2; n=5; Caenorhabditis|Rep: Putative uncharacterized protein hmit-1.2 - Caenorhabditis elegans Length = 613 Score = 33.1 bits (72), Expect = 4.5 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -1 Query: 382 CINSFTKSTNSLPFANPAVFRIHYCNHSIKVITCAIIDIIFVTF 251 C N KS +S P A V++ H+C S ++ ++ + +TF Sbjct: 443 CTNGLDKSNSSFPNATSYVWQKHHCTTSYTILPIVMMGVYLLTF 486 >UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2; Schistosoma mansoni|Rep: Thyroid hormone receptor beta - Schistosoma mansoni (Blood fluke) Length = 847 Score = 33.1 bits (72), Expect = 4.5 Identities = 20/74 (27%), Positives = 29/74 (39%) Frame = +2 Query: 152 LRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDS 331 L G C+VC T + C+ C F R K +Y C F G +V + ++ Sbjct: 143 LAGPEPCVVCGDNATGFHYRAMTCEGCKGFFRRSVQKKLIYTC---KFQGRCSVSDKQNR 199 Query: 332 WVCKWQRISRFCKG 373 C+ R R G Sbjct: 200 NSCQKCRFDRCISG 213 >UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear receptor AmNR2; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to nuclear receptor AmNR2 - Strongylocentrotus purpuratus Length = 448 Score = 32.7 bits (71), Expect = 6.0 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%) Frame = +2 Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTS-NNFDGMIAVMNPEDSWVC 340 R CLVC T + C+ C F + K +Y C +N +G + N C Sbjct: 63 RPCLVCGDRGTGCHYSVFSCEGCKGFFKRTVQKQLLYSCRGRSNMEGCCEI-NKTSRNSC 121 Query: 341 KWQRISR-FCKGVYAISV-SGRLPAGVIREMKSR 436 ++ R + G+ +V RLP G + K R Sbjct: 122 QFCRFQKCLTAGMKTDAVREDRLPGGKPKHKKLR 155 >UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n=1; Danio rerio|Rep: UPI00015A41AD UniRef100 entry - Danio rerio Length = 468 Score = 32.3 bits (70), Expect = 7.9 Identities = 13/51 (25%), Positives = 21/51 (41%) Frame = +2 Query: 128 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 S+ V + + C +C+ T + CD C F R K++ Y C Sbjct: 49 SVPVVVPQQSSMSLCAICADRATGKHYGASSCDGCKGFFRRSVRKNHAYTC 99 >UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7; Euteleostomi|Rep: Hepatocyte nuclear factor 4-beta - Xenopus laevis (African clawed frog) Length = 446 Score = 32.3 bits (70), Expect = 7.9 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +2 Query: 122 IMSIETVPKEL--RGLRA-CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 I+++ET L G+ + C +C T + CD C F R K++VY C Sbjct: 31 IITVETASPGLLNNGINSFCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYAC 86 >UniRef50_Q93099 Cluster: Homogentisate 1,2-dioxygenase; n=85; cellular organisms|Rep: Homogentisate 1,2-dioxygenase - Homo sapiens (Human) Length = 445 Score = 32.3 bits (70), Expect = 7.9 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -1 Query: 475 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 371 LSLA W + + L +Y+ CW+P ++ + NS Sbjct: 404 LSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 438 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 529,440,871 Number of Sequences: 1657284 Number of extensions: 10631634 Number of successful extensions: 32372 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 30826 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 32326 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 37071859483 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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