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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e06
         (559 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P63272 Cluster: Transcription elongation factor SPT4; n...   193   3e-48
UniRef50_Q9TZ93 Cluster: Transcription elongation factor SPT4; n...   148   1e-34
UniRef50_Q7S743 Cluster: Transcription elongation factor spt-4; ...   123   2e-27
UniRef50_Q5KB83 Cluster: Transcription elongation factor SPT4; n...   119   4e-26
UniRef50_A1CZA0 Cluster: Transcriptional elongation protein Spt4...   118   9e-26
UniRef50_Q4WU00 Cluster: Transcription elongation factor spt4; n...   111   8e-24
UniRef50_P63271-2 Cluster: Isoform 2 of P63271 ; n=1; Mus muscul...   107   1e-22
UniRef50_Q8SR92 Cluster: TRANSCRIPTION INITIATION PROTEIN; n=1; ...   105   5e-22
UniRef50_A2R9C7 Cluster: Cofactor: SPT4 of S. cerevisiae require...   101   2e-20
UniRef50_A3LNS8 Cluster: Predicted protein; n=2; Ascomycota|Rep:...   100   5e-20
UniRef50_Q94C60 Cluster: Transcription elongation factor SPT4 ho...    92   7e-18
UniRef50_P63271-3 Cluster: Isoform 3 of P63271 ; n=2; Eutheria|R...    91   1e-17
UniRef50_Q4I5W5 Cluster: Transcription elongation factor SPT4; n...    89   5e-17
UniRef50_Q4YU95 Cluster: Transcription factor, putative; n=5; Pl...    89   6e-17
UniRef50_P32914 Cluster: Transcription elongation factor SPT4; n...    85   1e-15
UniRef50_Q9P7K8 Cluster: Transcription elongation factor spt4; n...    83   3e-15
UniRef50_Q01ET3 Cluster: Spt4 Transcription elongation factor SP...    82   7e-15
UniRef50_Q4N8C8 Cluster: Transcription factor, putative; n=1; Th...    81   1e-14
UniRef50_P81205 Cluster: Transcription elongation factor SPT4; n...    80   3e-14
UniRef50_Q6FMX1 Cluster: Transcription elongation factor SPT4; n...    79   5e-14
UniRef50_A3FQ88 Cluster: Transcription factor, putative; n=1; Cr...    72   1e-11
UniRef50_Q54NF2 Cluster: Putative uncharacterized protein; n=1; ...    68   2e-10
UniRef50_UPI00004996AC Cluster: transcription initiation protein...    61   1e-08
UniRef50_A2FSB6 Cluster: Transcription initiation protein, putat...    60   3e-08
UniRef50_A7AWE9 Cluster: Transcription factor, putative; n=1; Ba...    58   2e-07
UniRef50_Q4UH88 Cluster: Possible transcription initiation prote...    52   4e-07
UniRef50_UPI000155CED1 Cluster: PREDICTED: similar to MGC84906 p...    56   7e-07
UniRef50_Q4DFX6 Cluster: Putative uncharacterized protein; n=2; ...    46   8e-04
UniRef50_Q38D81 Cluster: Putative uncharacterized protein; n=1; ...    41   0.017
UniRef50_A0CZM1 Cluster: Chromosome undetermined scaffold_32, wh...    38   0.12 
UniRef50_A0MNM7 Cluster: Homogentisate 1,2-dioxygenase; n=1; Sus...    35   1.5  
UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1...    35   1.5  
UniRef50_O01564 Cluster: Putative uncharacterized protein; n=2; ...    34   2.0  
UniRef50_Q2TUU7 Cluster: Thyroid hormone receptor alpha; n=5; Sc...    33   3.4  
UniRef50_A7RX02 Cluster: Predicted protein; n=1; Nematostella ve...    33   3.4  
UniRef50_Q92093 Cluster: Vitellogenin precursor (VTG) [Contains:...    33   3.4  
UniRef50_Q9XXQ9 Cluster: Putative uncharacterized protein hmit-1...    33   4.5  
UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2; Sch...    33   4.5  
UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear re...    33   6.0  
UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n...    32   7.9  
UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7; ...    32   7.9  
UniRef50_Q93099 Cluster: Homogentisate 1,2-dioxygenase; n=85; ce...    32   7.9  

>UniRef50_P63272 Cluster: Transcription elongation factor SPT4;
           n=31; Eumetazoa|Rep: Transcription elongation factor
           SPT4 - Homo sapiens (Human)
          Length = 117

 Score =  193 bits (470), Expect = 3e-48
 Identities = 79/114 (69%), Positives = 103/114 (90%)
 Frame = +2

Query: 125 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 304
           M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+
Sbjct: 1   MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60

Query: 305 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466
           IA+M+PEDSWV KWQR+S F  GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+
Sbjct: 61  IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 114


>UniRef50_Q9TZ93 Cluster: Transcription elongation factor SPT4; n=4;
           Bilateria|Rep: Transcription elongation factor SPT4 -
           Caenorhabditis elegans
          Length = 120

 Score =  148 bits (358), Expect = 1e-34
 Identities = 63/116 (54%), Positives = 89/116 (76%), Gaps = 2/116 (1%)
 Frame = +2

Query: 137 TVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVM 316
           +VP +LR LRACL+CSL+K+ + F+ EGC+NC++ L +K +++ VYDCTS N+DGMIA M
Sbjct: 4   SVPADLRNLRACLLCSLVKSVESFQKEGCENCEDVLHLKGDEEKVYDCTSANYDGMIAAM 63

Query: 317 NPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP--RDTSQR*K 478
           +  +SWVCKWQ++ R  KG+YAISVSG LP  ++ E+KS G+ Y+P  RD S + K
Sbjct: 64  SNNESWVCKWQKMQRKVKGMYAISVSGVLPNNIVSELKSLGVRYKPNQRDYSTQFK 119


>UniRef50_Q7S743 Cluster: Transcription elongation factor spt-4;
           n=4; Pezizomycotina|Rep: Transcription elongation factor
           spt-4 - Neurospora crassa
          Length = 120

 Score =  123 bits (297), Expect = 2e-27
 Identities = 52/108 (48%), Positives = 73/108 (67%)
 Frame = +2

Query: 143 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNP 322
           P + R LRAC+VCS++ T+ +F  EGC NC++FL ++ + D +  CTS  F+G+I + NP
Sbjct: 8   PGQQRYLRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEGIITIANP 67

Query: 323 EDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466
           + SWV KWQR+  + KGVYA  VSG+LP  V   ++  GI Y PRD S
Sbjct: 68  QKSWVAKWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIPRDGS 115


>UniRef50_Q5KB83 Cluster: Transcription elongation factor SPT4; n=1;
           Filobasidiella neoformans|Rep: Transcription elongation
           factor SPT4 - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 113

 Score =  119 bits (287), Expect = 4e-26
 Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
 Frame = +2

Query: 143 PKELRG-LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMN 319
           PK  R  LRACLVCS++++ + F  +GC NC++ L M+ + + V +CTS  +DGMIA++ 
Sbjct: 3   PKSGRAELRACLVCSILQSTNDFLTQGCPNCEDILEMRGSAERVAECTSLLYDGMIAMIE 62

Query: 320 PEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRD 460
           P +SWV +WQRI +  +G+YA+ V+GR P  VI  +++RG  YRPRD
Sbjct: 63  PSESWVARWQRIDKRMRGIYAVRVTGRAPQDVIDAIEARGGVYRPRD 109


>UniRef50_A1CZA0 Cluster: Transcriptional elongation protein Spt4,
           putative; n=5; Pezizomycotina|Rep: Transcriptional
           elongation protein Spt4, putative - Neosartorya fischeri
           (strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 122

 Score =  118 bits (284), Expect = 9e-26
 Identities = 49/113 (43%), Positives = 70/113 (61%)
 Frame = +2

Query: 128 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMI 307
           S    P + R LRAC+VCSL++   +F  EGC NCD  L ++ N D + +CTS  F+G+I
Sbjct: 4   SFYVAPSQQRTLRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGLI 63

Query: 308 AVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466
            + +P  SWV +WQR+  +  G YA+ V+G LP  VI  ++  G+ Y PRD S
Sbjct: 64  TLRDPTTSWVARWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVKYIPRDGS 116


>UniRef50_Q4WU00 Cluster: Transcription elongation factor spt4; n=2;
           Aspergillus|Rep: Transcription elongation factor spt4 -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 156

 Score =  111 bits (268), Expect = 8e-24
 Identities = 45/109 (41%), Positives = 67/109 (61%)
 Frame = +2

Query: 128 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMI 307
           S    P + R LRAC+VCSL++   +F  +GC NCD  L ++ N D + +CTS  F+G+I
Sbjct: 4   SYYVTPSQQRTLRACMVCSLVQLHSKFMRDGCPNCDNVLGLRGNNDAIQECTSQVFEGLI 63

Query: 308 AVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP 454
            + +P  SWV +WQR+  +  G YA+ V+G LP  VI  ++  G+ Y P
Sbjct: 64  TLRDPSTSWVARWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVRYIP 112


>UniRef50_P63271-2 Cluster: Isoform 2 of P63271 ; n=1; Mus
           musculus|Rep: Isoform 2 of P63271 - Mus musculus (Mouse)
          Length = 87

 Score =  107 bits (258), Expect = 1e-22
 Identities = 43/62 (69%), Positives = 56/62 (90%)
 Frame = +2

Query: 125 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 304
           M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG 
Sbjct: 1   MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGC 60

Query: 305 IA 310
           +A
Sbjct: 61  LA 62


>UniRef50_Q8SR92 Cluster: TRANSCRIPTION INITIATION PROTEIN; n=1;
           Encephalitozoon cuniculi|Rep: TRANSCRIPTION INITIATION
           PROTEIN - Encephalitozoon cuniculi
          Length = 116

 Score =  105 bits (253), Expect = 5e-22
 Identities = 49/102 (48%), Positives = 65/102 (63%)
 Frame = +2

Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340
           LRACL CS IKT + F  +GC+NC   L MK N  NV +CTS+ F G++A++ P +SWV 
Sbjct: 13  LRACLGCSQIKTLNGFRKDGCENCP-MLNMKGNVTNVSECTSSKFKGVVALLQPSNSWVG 71

Query: 341 KWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466
           KWQRI  F KG+YA+ V G L    I++++  G  Y  R  S
Sbjct: 72  KWQRIGEFRKGLYAMVVEGALSEDFIKDLEQHGRIYYERTES 113


>UniRef50_A2R9C7 Cluster: Cofactor: SPT4 of S. cerevisiae requires
           metal binding for its function; n=1; Aspergillus
           niger|Rep: Cofactor: SPT4 of S. cerevisiae requires
           metal binding for its function - Aspergillus niger
          Length = 100

 Score =  101 bits (241), Expect = 2e-20
 Identities = 39/91 (42%), Positives = 58/91 (63%)
 Frame = +2

Query: 125 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 304
           MS    P + R LRAC+VCSL++   +F  EGC NCD  L ++ N D + +CTS  F+G+
Sbjct: 1   MSFYVAPSQQRTLRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGL 60

Query: 305 IAVMNPEDSWVCKWQRISRFCKGVYAISVSG 397
           + + +P  SWV +WQR+  +  G YA+ V+G
Sbjct: 61  VTLRDPTTSWVARWQRLDSYVPGTYAVKVTG 91


>UniRef50_A3LNS8 Cluster: Predicted protein; n=2; Ascomycota|Rep:
           Predicted protein - Pichia stipitis (Yeast)
          Length = 112

 Score = 99.5 bits (237), Expect = 5e-20
 Identities = 41/106 (38%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = +2

Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDN-VYDCTSNNFDGMIAV-MNPED 328
           R  RAC++C +++   +F   GC NC+  L  + N++  V DCTS +F+G++A+  +  +
Sbjct: 4   RSERACMLCGIVQPMKRFVDYGCPNCESLLHFQDNEEGQVQDCTSPSFEGLVALGQDNRN 63

Query: 329 SWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466
           SWV +W RI  F  G+YA+ V+G+LP  +I +++++ + YRPRD S
Sbjct: 64  SWVARWLRIDSFNPGLYAVKVNGKLPPHIISDLEAQDVIYRPRDGS 109


>UniRef50_Q94C60 Cluster: Transcription elongation factor SPT4
           homolog 2; n=9; Spermatophyta|Rep: Transcription
           elongation factor SPT4 homolog 2 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 116

 Score = 92.3 bits (219), Expect = 7e-18
 Identities = 38/82 (46%), Positives = 56/82 (68%)
 Frame = +2

Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340
           LRACL C L+KT+DQF   GC+NC  F +M+ + + + + T+ NF+G+I+VM+P  SW  
Sbjct: 16  LRACLRCRLVKTYDQFRDAGCENCP-FFKMEEDHERIVEVTTPNFNGIISVMDPSRSWAA 74

Query: 341 KWQRISRFCKGVYAISVSGRLP 406
           +W RI +F  G Y ++VS  LP
Sbjct: 75  RWLRIGKFAPGCYTLAVSEPLP 96


>UniRef50_P63271-3 Cluster: Isoform 3 of P63271 ; n=2; Eutheria|Rep:
           Isoform 3 of P63271 - Mus musculus (Mouse)
          Length = 99

 Score = 91.5 bits (217), Expect = 1e-17
 Identities = 37/55 (67%), Positives = 49/55 (89%)
 Frame = +2

Query: 302 MIAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466
           +IA+M+PEDSWV KWQR+S F  GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+
Sbjct: 42  IIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 96


>UniRef50_Q4I5W5 Cluster: Transcription elongation factor SPT4; n=1;
           Gibberella zeae|Rep: Transcription elongation factor
           SPT4 - Gibberella zeae (Fusarium graminearum)
          Length = 99

 Score = 89.4 bits (212), Expect = 5e-17
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +2

Query: 194 TFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQRISRFCKG 373
           T  +F+ EGC NC+EFL ++ + D +  CTS  F+G+I + NP  SW+ K+QR+  +  G
Sbjct: 2   TSQRFQNEGCPNCEEFLHLQHSPDQIESCTSQVFEGVITLANPTKSWIAKYQRLDSYVPG 61

Query: 374 VYAISVSGRLPAGVIREMKSR-GIAYRPRDTSQ 469
           +YAI VSG+LP  V   ++    I Y PRD ++
Sbjct: 62  MYAIKVSGQLPDDVRSTLEDEYRIQYIPRDGTE 94


>UniRef50_Q4YU95 Cluster: Transcription factor, putative; n=5;
           Plasmodium|Rep: Transcription factor, putative -
           Plasmodium berghei
          Length = 136

 Score = 89.0 bits (211), Expect = 6e-17
 Identities = 39/91 (42%), Positives = 58/91 (63%)
 Frame = +2

Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340
           LRACL C L++T  +F   GC NC +FL+M  ++  + DCT+ NF G IA+  P  SW+ 
Sbjct: 46  LRACLSCRLLRTEAEFYQNGCSNC-KFLQMTGDRHRIQDCTTENFSGFIAITTPTKSWIA 104

Query: 341 KWQRISRFCKGVYAISVSGRLPAGVIREMKS 433
           ++  +S++  G YA+ V G LP   IR++KS
Sbjct: 105 QYNDLSKYNPGFYALQVVGELPES-IRDLKS 134


>UniRef50_P32914 Cluster: Transcription elongation factor SPT4;
           n=11; Saccharomycetales|Rep: Transcription elongation
           factor SPT4 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 102

 Score = 85.0 bits (201), Expect = 1e-15
 Identities = 38/102 (37%), Positives = 58/102 (56%)
 Frame = +2

Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343
           RAC++C +++T ++F  +GC NC           +  +CTS +F+G++ +  P  SWV K
Sbjct: 5   RACMLCGIVQTTNEFNRDGCPNCQGIFEEAGV--STMECTSPSFEGLVGMCKPTKSWVAK 62

Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQ 469
           W  +     G+YAI V GRLPA V+  +      Y+PRD SQ
Sbjct: 63  WLSVDHSIAGMYAIKVDGRLPAEVVELLPH----YKPRDGSQ 100


>UniRef50_Q9P7K8 Cluster: Transcription elongation factor spt4; n=1;
           Schizosaccharomyces pombe|Rep: Transcription elongation
           factor spt4 - Schizosaccharomyces pombe (Fission yeast)
          Length = 105

 Score = 83.4 bits (197), Expect = 3e-15
 Identities = 40/99 (40%), Positives = 57/99 (57%)
 Frame = +2

Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343
           RACL+C ++     F  +GC N           D+V   TS  F+G++A+M+P +SWV +
Sbjct: 10  RACLICGIVLPHSVFANKGCPN--------DGVDDVETFTSPVFEGIMAMMSPTESWVAR 61

Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRD 460
           WQRI  F  G+YA  V G L   V+  ++ RGI YRPR+
Sbjct: 62  WQRIDTFTPGIYATRVQGVLNEDVVESLRRRGINYRPRN 100


>UniRef50_Q01ET3 Cluster: Spt4 Transcription elongation factor SPT4;
           n=2; Ostreococcus|Rep: Spt4 Transcription elongation
           factor SPT4 - Ostreococcus tauri
          Length = 115

 Score = 82.2 bits (194), Expect = 7e-15
 Identities = 32/81 (39%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = +2

Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPED-SWVC 340
           RAC+ C L+KTFDQF  +GC+NC + L +K +++ V +CT+ ++ G++++++ E+ SWV 
Sbjct: 25  RACIGCKLVKTFDQFIEDGCENC-QHLALKDDRERVSECTTTSYSGVVSLLSDENASWVG 83

Query: 341 KWQRISRFCKGVYAISVSGRL 403
           KW  + ++  G YA+ + G L
Sbjct: 84  KWLHLGKYACGCYALQLQGSL 104


>UniRef50_Q4N8C8 Cluster: Transcription factor, putative; n=1;
           Theileria parva|Rep: Transcription factor, putative -
           Theileria parva
          Length = 140

 Score = 81.4 bits (192), Expect = 1e-14
 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
 Frame = +2

Query: 161 LRACLVCSLIKTFDQFE---YE-GCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPED 328
           LRAC+ C LI + DQ     YE GC NC  FL+M  +     DCTS NF+G I++M+P+ 
Sbjct: 47  LRACISCRLIMSEDQVSVTFYENGCGNCS-FLQMDGDHRRTLDCTSANFNGFISIMDPQK 105

Query: 329 SWVCKWQRISRFCKGVYAISVSGRLPAGVIREM 427
           SW  ++  +S    G YAISV+G LP  +  E+
Sbjct: 106 SWSARYNNLSDLIPGCYAISVNGTLPESIKDEL 138


>UniRef50_P81205 Cluster: Transcription elongation factor SPT4; n=2;
           Saccharomycetaceae|Rep: Transcription elongation factor
           SPT4 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 102

 Score = 80.2 bits (189), Expect = 3e-14
 Identities = 35/102 (34%), Positives = 55/102 (53%)
 Frame = +2

Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343
           RAC++C L+++  +F   GC NC           +  +CTS +F+G++ +  P  SWV +
Sbjct: 5   RACMLCGLVQSTAEFNRNGCPNCQSIFEEAGV--SAVECTSPSFEGLVGMCKPSRSWVAR 62

Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQ 469
           W  I  +  G+YA+ + GRLP  V   +      Y+PRD SQ
Sbjct: 63  WMSIDSYIPGMYAVKIDGRLPIEVTELLPH----YKPRDGSQ 100


>UniRef50_Q6FMX1 Cluster: Transcription elongation factor SPT4; n=2;
           Saccharomycetales|Rep: Transcription elongation factor
           SPT4 - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 102

 Score = 79.4 bits (187), Expect = 5e-14
 Identities = 36/102 (35%), Positives = 56/102 (54%)
 Frame = +2

Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343
           RAC++C +++T ++F   GC NC           +  +CTS +F+G++ +  P  SWV K
Sbjct: 5   RACMLCGIVQTTNEFGRVGCPNCQGIFEEAGV--STMECTSPSFEGLVGMCKPTKSWVAK 62

Query: 344 WQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQ 469
           W  +     G+YA+ V GRLP  V+  +      Y+PRD SQ
Sbjct: 63  WLSVDANIPGMYAVKVDGRLPPEVVELLPH----YKPRDGSQ 100


>UniRef50_A3FQ88 Cluster: Transcription factor, putative; n=1;
           Cryptosporidium parvum Iowa II|Rep: Transcription
           factor, putative - Cryptosporidium parvum Iowa II
          Length = 124

 Score = 71.7 bits (168), Expect = 1e-11
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340
           LRACL C +I +  QF   GC NC   L M+ ++  V  CTS +F GMI+++ P +SWV 
Sbjct: 32  LRACLSCRIILSDQQFYEGGCPNCTH-LAMEFDRQKVNSCTSMSFKGMISMLKPNESWVA 90

Query: 341 KWQR-ISRFCKGVYAISVSG 397
           ++ + +     G YA+SVSG
Sbjct: 91  RYNKLLPNIVPGCYAVSVSG 110


>UniRef50_Q54NF2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 91

 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 32/84 (38%), Positives = 50/84 (59%)
 Frame = +2

Query: 140 VPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMN 319
           VP   +  RAC  C L+K+  QFE  GC+NC       S+  +    T+ NF+G+IA+MN
Sbjct: 12  VPSSFKHARACTECGLVKSAQQFEDNGCENCS------SSSSS----TTQNFEGIIAIMN 61

Query: 320 PEDSWVCKWQRISRFCKGVYAISV 391
           P++SW+ +  +  R   G+YA+S+
Sbjct: 62  PKESWIARRLQFERRVPGLYALSM 85


>UniRef50_UPI00004996AC Cluster: transcription initiation protein
           SPT4; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
           transcription initiation protein SPT4 - Entamoeba
           histolytica HM-1:IMSS
          Length = 128

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +2

Query: 140 VPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMN 319
           +P     LR C +C LIK+ +QF+ +GCDNC  +       DN  D  S+NF GM++++ 
Sbjct: 26  IPSNFNTLRCCKICGLIKSQEQFQRDGCDNCKRYF------DNWEDYVSSNFTGMLSLLR 79

Query: 320 PEDSWVCKWQRI-SRFCKGVYAIS 388
           P+ S++ K   +   +  G+YA S
Sbjct: 80  PDRSFIGKVLGMKDTYVCGLYAAS 103


>UniRef50_A2FSB6 Cluster: Transcription initiation protein,
           putative; n=1; Trichomonas vaginalis G3|Rep:
           Transcription initiation protein, putative - Trichomonas
           vaginalis G3
          Length = 123

 Score = 60.1 bits (139), Expect = 3e-08
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
 Frame = +2

Query: 137 TVPKELRGLRACLVCSLIKTFDQFEYEG-CDNCDEFLRMKSNKDNVYDCTSNNFDGMIAV 313
           T+PK+ R + AC+ C LI+  D +++E  C NC            +    SN+F+G++A+
Sbjct: 8   TLPKKSRSMAACIGCGLIQDRDVWKHETTCPNCGW------TATEIDSWVSNSFNGILAL 61

Query: 314 MNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRG 439
             P+ SW   W + ++   G+Y I   G +   +++ ++S G
Sbjct: 62  FQPQKSWCSSWLKYNKNVPGIYCIDNLGEVTDTIVQHLESYG 103


>UniRef50_A7AWE9 Cluster: Transcription factor, putative; n=1;
           Babesia bovis|Rep: Transcription factor, putative -
           Babesia bovis
          Length = 136

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 44/85 (51%)
 Frame = +2

Query: 161 LRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVC 340
           LRACL C LI + DQ              M  ++    DCT+ NF G++++M+P+ SW  
Sbjct: 60  LRACLSCRLIMSEDQ--------------MDGDRRRTLDCTTANFSGLLSIMDPQKSWAA 105

Query: 341 KWQRISRFCKGVYAISVSGRLPAGV 415
           ++  +     G YAISV G LP  V
Sbjct: 106 RYNSLVDVIPGCYAISVVGELPESV 130


>UniRef50_Q4UH88 Cluster: Possible transcription initiation protein
           spt4-like, putatve; n=1; Theileria annulata|Rep:
           Possible transcription initiation protein spt4-like,
           putatve - Theileria annulata
          Length = 230

 Score = 52.4 bits (120), Expect(2) = 4e-07
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = +2

Query: 206 FEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQRIS 358
           F   GC NC  FL+M  +   + DCTS+NF+G I++++P+ SW  ++  +S
Sbjct: 126 FYENGCGNCS-FLQMDGDHRRILDCTSSNFNGFISIIDPQKSWSARYNNLS 175



 Score = 23.8 bits (49), Expect(2) = 4e-07
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 371 GVYAISVSGRLPAGVIREM 427
           G YAISV+G LP  +  E+
Sbjct: 210 GCYAISVNGTLPESIKDEL 228


>UniRef50_UPI000155CED1 Cluster: PREDICTED: similar to MGC84906
           protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to MGC84906 protein - Ornithorhynchus anatinus
          Length = 64

 Score = 55.6 bits (128), Expect = 7e-07
 Identities = 22/35 (62%), Positives = 30/35 (85%)
 Frame = +2

Query: 362 FCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 466
           F  GVYA+SV+GRLP G++RE+KSRG+ Y+ RDT+
Sbjct: 27  FKPGVYAVSVTGRLPQGIVRELKSRGVVYKSRDTA 61


>UniRef50_Q4DFX6 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 218

 Score = 45.6 bits (103), Expect = 8e-04
 Identities = 25/76 (32%), Positives = 38/76 (50%)
 Frame = +2

Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSW 334
           RG  AC  C LI T  QF  +GC  C        ++D ++D T+ +F   + ++ PE SW
Sbjct: 77  RGYLACRQCRLILTETQFIRDGCSVCG---TGPVSRDELHDVTTADFSNFVGLIAPEKSW 133

Query: 335 VCKWQRISRFCKGVYA 382
           V +    +    GV+A
Sbjct: 134 VARMIGRTGCPNGVFA 149


>UniRef50_Q38D81 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 271

 Score = 41.1 bits (92), Expect = 0.017
 Identities = 24/75 (32%), Positives = 35/75 (46%)
 Frame = +2

Query: 158 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 337
           G  AC  C LI T  QF +EGC  C        +++ + D  +  F   I ++ PE SWV
Sbjct: 136 GYLACRRCRLIITEQQFLHEGCQVCG---TGPVSREELLDVATAEFSNFIGLIAPEKSWV 192

Query: 338 CKWQRISRFCKGVYA 382
            +    +    GV+A
Sbjct: 193 GRLINRTNCPNGVFA 207


>UniRef50_A0CZM1 Cluster: Chromosome undetermined scaffold_32, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_32,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 94

 Score = 38.3 bits (85), Expect = 0.12
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = +2

Query: 140 VPKELRGLRACLVCSLIKTFDQF-EYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVM 316
           +PK+++ LRAC  C L+ T +Q+ +   C N        +++  +Y        G+I VM
Sbjct: 18  IPKQIKDLRACQFCGLLLTLEQWNKITQCLN-----GCSADQTKIY-------SGVICVM 65

Query: 317 NPEDSWVCKWQRISR-FCKGVYAISV 391
            P  SWV K    S+    G+YAI V
Sbjct: 66  KPSKSWVIKKLGNSKNIHPGLYAIDV 91


>UniRef50_A0MNM7 Cluster: Homogentisate 1,2-dioxygenase; n=1; Sus
           scrofa|Rep: Homogentisate 1,2-dioxygenase - Sus scrofa
           (Pig)
          Length = 49

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 475 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 371
           LS+A   W +  ++ L  +YY CW+P ++ +  NS
Sbjct: 8   LSMAVTRWGLKTSNCLDENYYKCWEPLKSHFTPNS 42


>UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: EGF-like domain
            containing protein - Tetrahymena thermophila SB210
          Length = 2328

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 170  CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTS 286
            C+VCS  + +D   Y+ C NC+       +KDN   CTS
Sbjct: 1309 CIVCSQSQVYDSVHYQ-CVNCNPTCLTCQDKDNTNKCTS 1346



 Score = 33.9 bits (74), Expect = 2.6
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 158  GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292
            G + C  C L +  D    + C NCD   R   +KDN+  CTS N
Sbjct: 946  GSKTCKSCQLNQVIDTIN-KICVNCDPSCRTCKDKDNLQACTSCN 989


>UniRef50_O01564 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 357

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 28/106 (26%), Positives = 40/106 (37%)
 Frame = +2

Query: 119 SIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFD 298
           S  S E     L G +AC+VC        F    CD C  F R     +  Y C   N  
Sbjct: 10  SSSSPEMFALNLTGQKACVVCKRPANCYNFGVMSCDACKMFFRRTMLLNVQYVCRRKN-- 67

Query: 299 GMIAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSR 436
                   +DS+ C      R C+ V  + V  +L    + E+K++
Sbjct: 68  -----QCFDDSFSCLKTPYCRACRLVQCVKVGMKLNLSAMLEVKNQ 108


>UniRef50_Q2TUU7 Cluster: Thyroid hormone receptor alpha; n=5;
           Schistosoma mansoni|Rep: Thyroid hormone receptor alpha
           - Schistosoma mansoni (Blood fluke)
          Length = 1115

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +2

Query: 158 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 337
           G   C+VC    T   +    C+ C  F R    K  VY C    ++G  +V + ++   
Sbjct: 198 GPEPCVVCGDNATGFHYRAMTCEGCKGFFRRSVQKKLVYTC---KYNGRCSVSDKQNRNS 254

Query: 338 CKWQRISRFCKG 373
           C+  R  R  KG
Sbjct: 255 CQKCRFDRCIKG 266


>UniRef50_A7RX02 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 334

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
 Frame = -1

Query: 475 LSLAC-VPWAIGNTSTL-HFSYYTC-WQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN 305
           +S AC +P+ + +   L H  Y+TC + P    YCI+        +PF    VF +H  +
Sbjct: 246 ISPACFIPFTVFHLHVLSHLLYFTCMFYPI---YCISPAC----FIPFT---VFHLHVLS 295

Query: 304 HSIKVITCAIIDIIFVTFHAKKFITIVTAFIFKLVKCLY 188
           H +   TC    + F  FH   FI      +  L   LY
Sbjct: 296 HLL-YFTCMFYTVPFTVFHLHVFIPFTVFHLHVLSHLLY 333


>UniRef50_Q92093 Cluster: Vitellogenin precursor (VTG) [Contains:
            Lipovitellin I (LVI); Phosvitin (PV); Lipovitellin II
            (LVII)]; n=49; Elopocephala|Rep: Vitellogenin precursor
            (VTG) [Contains: Lipovitellin I (LVI); Phosvitin (PV);
            Lipovitellin II (LVII)] - Oncorhynchus mykiss (Rainbow
            trout) (Salmo gairdneri)
          Length = 1659

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -1

Query: 412  TCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCNHSIKVITCAIIDIIFVTFHAKKF 236
            T ++   N  C   F   T+  PF +  V +IHY    +  + C+++     TF+ KK+
Sbjct: 1348 TLYKLGVNLPCSLPFESMTDLSPFDDNIVNKIHYLFSEVNAVKCSMVRDTLTTFNNKKY 1406


>UniRef50_Q9XXQ9 Cluster: Putative uncharacterized protein hmit-1.2;
           n=5; Caenorhabditis|Rep: Putative uncharacterized
           protein hmit-1.2 - Caenorhabditis elegans
          Length = 613

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 382 CINSFTKSTNSLPFANPAVFRIHYCNHSIKVITCAIIDIIFVTF 251
           C N   KS +S P A   V++ H+C  S  ++   ++ +  +TF
Sbjct: 443 CTNGLDKSNSSFPNATSYVWQKHHCTTSYTILPIVMMGVYLLTF 486


>UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2;
           Schistosoma mansoni|Rep: Thyroid hormone receptor beta -
           Schistosoma mansoni (Blood fluke)
          Length = 847

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 20/74 (27%), Positives = 29/74 (39%)
 Frame = +2

Query: 152 LRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDS 331
           L G   C+VC    T   +    C+ C  F R    K  +Y C    F G  +V + ++ 
Sbjct: 143 LAGPEPCVVCGDNATGFHYRAMTCEGCKGFFRRSVQKKLIYTC---KFQGRCSVSDKQNR 199

Query: 332 WVCKWQRISRFCKG 373
             C+  R  R   G
Sbjct: 200 NSCQKCRFDRCISG 213


>UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear
           receptor AmNR2; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to nuclear receptor AmNR2 -
           Strongylocentrotus purpuratus
          Length = 448

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
 Frame = +2

Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTS-NNFDGMIAVMNPEDSWVC 340
           R CLVC    T   +    C+ C  F +    K  +Y C   +N +G   + N      C
Sbjct: 63  RPCLVCGDRGTGCHYSVFSCEGCKGFFKRTVQKQLLYSCRGRSNMEGCCEI-NKTSRNSC 121

Query: 341 KWQRISR-FCKGVYAISV-SGRLPAGVIREMKSR 436
           ++ R  +    G+   +V   RLP G  +  K R
Sbjct: 122 QFCRFQKCLTAGMKTDAVREDRLPGGKPKHKKLR 155


>UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n=1;
           Danio rerio|Rep: UPI00015A41AD UniRef100 entry - Danio
           rerio
          Length = 468

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +2

Query: 128 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280
           S+  V  +   +  C +C+   T   +    CD C  F R    K++ Y C
Sbjct: 49  SVPVVVPQQSSMSLCAICADRATGKHYGASSCDGCKGFFRRSVRKNHAYTC 99


>UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7;
           Euteleostomi|Rep: Hepatocyte nuclear factor 4-beta -
           Xenopus laevis (African clawed frog)
          Length = 446

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +2

Query: 122 IMSIETVPKEL--RGLRA-CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280
           I+++ET    L   G+ + C +C    T   +    CD C  F R    K++VY C
Sbjct: 31  IITVETASPGLLNNGINSFCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYAC 86


>UniRef50_Q93099 Cluster: Homogentisate 1,2-dioxygenase; n=85;
           cellular organisms|Rep: Homogentisate 1,2-dioxygenase -
           Homo sapiens (Human)
          Length = 445

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 475 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 371
           LSLA   W +  +  L  +Y+ CW+P ++ +  NS
Sbjct: 404 LSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 438


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,440,871
Number of Sequences: 1657284
Number of extensions: 10631634
Number of successful extensions: 32372
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 30826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32326
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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