Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e06
         (559 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   5.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   5.1  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   6.8  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   6.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   9.0  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 400 PSRNRYCINS 371
           P+R RYCINS
Sbjct: 11  PTRKRYCINS 20


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 213  YSNWSNVFIKEQTRHARNPRNSFGTVSMDII 121
            Y N ++  +K +   A +P N  G +S DI+
Sbjct: 1183 YHNINDPIVKLRATDADDPTNGNGQLSFDIV 1213


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 442 NTSTLHFSYYTCWQPSRNRYCINSF 368
           N +T +    TC +P    YCI  F
Sbjct: 392 NVATANHPNATCGRPEFGDYCITDF 416


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 140 PFLWTLYCTVCIENKLNNK 84
           PF+   +C +C+  +LN++
Sbjct: 280 PFIIMAFCYICVSIRLNDR 298


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 305 IAVMNPEDSWVCKWQRISRFC 367
           +++ NP  +W   W+ I R C
Sbjct: 931 VSLENPSVNWRLLWRNIHRSC 951


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,983
Number of Sequences: 2352
Number of extensions: 12343
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)