BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12e06 (559 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF099916-1|AAC68775.1| 120|Caenorhabditis elegans Spt transcrip... 148 3e-36 U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 34 0.060 AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 33 0.14 U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone... 31 0.43 AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear recep... 31 0.43 U37424-1|AAA80355.1| 359|Caenorhabditis elegans NHR-2 protein. 30 0.98 AF332201-1|AAK17972.1| 474|Caenorhabditis elegans nuclear recep... 30 0.98 AF332200-1|AAK17971.1| 453|Caenorhabditis elegans nuclear recep... 30 0.98 AF000195-4|AAC24271.2| 359|Caenorhabditis elegans Nuclear hormo... 30 0.98 Z75554-2|CAA99954.1| 526|Caenorhabditis elegans Hypothetical pr... 30 1.3 Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 29 1.7 Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 29 1.7 Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 29 1.7 Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 29 1.7 Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 29 1.7 Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 29 1.7 Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 29 1.7 Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 29 1.7 Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 29 1.7 Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 29 1.7 AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 29 1.7 Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical p... 29 2.3 Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 29 2.3 AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 29 2.3 AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear recep... 29 2.3 AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear recep... 29 2.3 Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical pr... 29 3.0 Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical pr... 29 3.0 U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 3.0 AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 3.0 AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 3.0 AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 3.0 AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 29 3.0 AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 29 3.0 Z82259-8|CAC70072.3| 410|Caenorhabditis elegans Hypothetical pr... 28 4.0 Z81575-10|CAB04640.1| 338|Caenorhabditis elegans Hypothetical p... 28 4.0 AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormo... 28 5.2 Z96048-5|CAB09422.1| 443|Caenorhabditis elegans Hypothetical pr... 27 6.9 Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical pr... 27 6.9 Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical pr... 27 6.9 Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical pr... 27 6.9 U41104-4|AAK67239.1| 388|Caenorhabditis elegans Nuclear hormone... 27 6.9 AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear recep... 27 6.9 AF273808-1|AAG15157.1| 442|Caenorhabditis elegans nuclear recep... 27 6.9 AF083231-1|AAD03689.1| 388|Caenorhabditis elegans nuclear recep... 27 6.9 AC006675-12|AAK84548.1| 418|Caenorhabditis elegans Nuclear horm... 27 6.9 Z81496-8|CAB04068.1| 498|Caenorhabditis elegans Hypothetical pr... 27 9.1 Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 27 9.1 AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear recep... 27 9.1 AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 27 9.1 AL032626-18|CAA21543.2| 458|Caenorhabditis elegans Hypothetical... 27 9.1 AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear recep... 27 9.1 AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear recep... 27 9.1 AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear recep... 27 9.1 AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 27 9.1 AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 27 9.1 AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormo... 27 9.1 AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormo... 27 9.1 AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 27 9.1 AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 27 9.1 AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormo... 27 9.1 >AF099916-1|AAC68775.1| 120|Caenorhabditis elegans Spt transcription factor familyprotein 4 protein. Length = 120 Score = 148 bits (358), Expect = 3e-36 Identities = 63/116 (54%), Positives = 89/116 (76%), Gaps = 2/116 (1%) Frame = +2 Query: 137 TVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVM 316 +VP +LR LRACL+CSL+K+ + F+ EGC+NC++ L +K +++ VYDCTS N+DGMIA M Sbjct: 4 SVPADLRNLRACLLCSLVKSVESFQKEGCENCEDVLHLKGDEEKVYDCTSANYDGMIAAM 63 Query: 317 NPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP--RDTSQR*K 478 + +SWVCKWQ++ R KG+YAISVSG LP ++ E+KS G+ Y+P RD S + K Sbjct: 64 SNNESWVCKWQKMQRKVKGMYAISVSGVLPNNIVSELKSLGVRYKPNQRDYSTQFK 119 >U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical protein F47C10.4 protein. Length = 357 Score = 34.3 bits (75), Expect = 0.060 Identities = 28/106 (26%), Positives = 40/106 (37%) Frame = +2 Query: 119 SIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFD 298 S S E L G +AC+VC F CD C F R + Y C N Sbjct: 10 SSSSPEMFALNLTGQKACVVCKRPANCYNFGVMSCDACKMFFRRTMLLNVQYVCRRKN-- 67 Query: 299 GMIAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSR 436 +DS+ C R C+ V + V +L + E+K++ Sbjct: 68 -----QCFDDSFSCLKTPYCRACRLVQCVKVGMKLNLSAMLEVKNQ 108 >AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical protein Y51A2D.5 protein. Length = 613 Score = 33.1 bits (72), Expect = 0.14 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -1 Query: 382 CINSFTKSTNSLPFANPAVFRIHYCNHSIKVITCAIIDIIFVTF 251 C N KS +S P A V++ H+C S ++ ++ + +TF Sbjct: 443 CTNGLDKSNSSFPNATSYVWQKHHCTTSYTILPIVMMGVYLLTF 486 >U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone receptor familyprotein 10 protein. Length = 395 Score = 31.5 bits (68), Expect = 0.43 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 CLVCS I T + C+ C F R K+ + C Sbjct: 18 CLVCSDISTGYHYGVPSCNGCKTFFRRTIMKNQTFSC 54 >AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear receptor NHR-10 protein. Length = 395 Score = 31.5 bits (68), Expect = 0.43 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 CLVCS I T + C+ C F R K+ + C Sbjct: 18 CLVCSDISTGYHYGVPSCNGCKTFFRRTIMKNQTFSC 54 >U37424-1|AAA80355.1| 359|Caenorhabditis elegans NHR-2 protein. Length = 359 Score = 30.3 bits (65), Expect = 0.98 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCT 283 C+VC T + + C+ C F R +K+ Y CT Sbjct: 105 CMVCGDNSTGYHYGVQSCEGCKGFFRRSVHKNIAYVCT 142 >AF332201-1|AAK17972.1| 474|Caenorhabditis elegans nuclear receptor NHR-2 protein. Length = 474 Score = 30.3 bits (65), Expect = 0.98 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCT 283 C+VC T + + C+ C F R +K+ Y CT Sbjct: 220 CMVCGDNSTGYHYGVQSCEGCKGFFRRSVHKNIAYVCT 257 >AF332200-1|AAK17971.1| 453|Caenorhabditis elegans nuclear receptor NHR-2 protein. Length = 453 Score = 30.3 bits (65), Expect = 0.98 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCT 283 C+VC T + + C+ C F R +K+ Y CT Sbjct: 216 CMVCGDNSTGYHYGVQSCEGCKGFFRRSVHKNIAYVCT 253 >AF000195-4|AAC24271.2| 359|Caenorhabditis elegans Nuclear hormone receptor familyprotein 2 protein. Length = 359 Score = 30.3 bits (65), Expect = 0.98 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCT 283 C+VC T + + C+ C F R +K+ Y CT Sbjct: 105 CMVCGDNSTGYHYGVQSCEGCKGFFRRSVHKNIAYVCT 142 >Z75554-2|CAA99954.1| 526|Caenorhabditis elegans Hypothetical protein ZC455.3 protein. Length = 526 Score = 29.9 bits (64), Expect = 1.3 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -1 Query: 370 FTKSTNSLPFANPAVFRIHYCNHSIKVITCAIIDIIFVTFHAKKFITIVTAFIFKL 203 F + N P+AN F YC S+ ++ C I + V F F +V + I KL Sbjct: 468 FAQVDNLEPYANKYNFIEFYCLDSLALVVCTISVVALVMFKILSF--VVNSVIEKL 521 >Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical protein C30D11.1h protein. Length = 666 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 240 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 297 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 298 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 329 >Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical protein C30D11.1g protein. Length = 714 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 240 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 297 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 298 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 329 >Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical protein C30D11.1f protein. Length = 791 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 240 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 297 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 298 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 329 >Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical protein C30D11.1e protein. Length = 801 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 250 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 307 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 308 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 339 >Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical protein C30D11.1d protein. Length = 805 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 254 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 311 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 312 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 343 >Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical protein C30D11.1c protein. Length = 863 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 312 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 369 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 370 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 401 >Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical protein C30D11.1b protein. Length = 821 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 270 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 327 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 328 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 359 >Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical protein C30D11.1a protein. Length = 829 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 278 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 335 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 336 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 367 >Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical protein C30D11.1h protein. Length = 666 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 240 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 297 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 298 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 329 >Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical protein C30D11.1g protein. Length = 714 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 240 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 297 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 298 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 329 >Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical protein C30D11.1f protein. Length = 791 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 240 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 297 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 298 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 329 >Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical protein C30D11.1e protein. Length = 801 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 250 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 307 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 308 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 339 >Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical protein C30D11.1d protein. Length = 805 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 254 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 311 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 312 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 343 >Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical protein C30D11.1c protein. Length = 863 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 312 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 369 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 370 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 401 >Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical protein C30D11.1b protein. Length = 821 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 270 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 327 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 328 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 359 >Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical protein C30D11.1a protein. Length = 829 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 278 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 335 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 336 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 367 >AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like potassium channel protein. Length = 791 Score = 29.5 bits (63), Expect = 1.7 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = -1 Query: 469 LACVPWAIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFANPAVFRIHYCN--HSI 296 LAC+ +AIG+ H Y W ++ +T + ++P P + + + ++ Sbjct: 240 LACIWYAIGSAELSHKEY--TWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTL 297 Query: 295 KVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 IT + T ++K TI+ + L+ Sbjct: 298 STITSIGFGNVSATTDSEKIFTIIMMILGSLM 329 >Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical protein K06B4.11 protein. Length = 364 Score = 29.1 bits (62), Expect = 2.3 Identities = 12/40 (30%), Positives = 16/40 (40%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 CL+C + F C C F R + V+DC N Sbjct: 23 CLICCEVADGHHFGAAACRACAAFFRRTVQLNKVHDCPKN 62 >Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical protein M01G12.12 protein. Length = 1579 Score = 29.1 bits (62), Expect = 2.3 Identities = 18/76 (23%), Positives = 30/76 (39%) Frame = +2 Query: 209 EYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQRISRFCKGVYAIS 388 E++G DN + KS + + S DG M + + + Y I Sbjct: 1075 EFQGIDNAMKISEEKSEQYKIEVDESIRVDGFEEYMEDAKKQLASYNGQLKSTMDTYGIQ 1134 Query: 389 VSGRLPAGVIREMKSR 436 G + +G I EM++R Sbjct: 1135 SEGEIMSGCIIEMRNR 1150 >AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical protein M01G12.12 protein. Length = 1579 Score = 29.1 bits (62), Expect = 2.3 Identities = 18/76 (23%), Positives = 30/76 (39%) Frame = +2 Query: 209 EYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQRISRFCKGVYAIS 388 E++G DN + KS + + S DG M + + + Y I Sbjct: 1075 EFQGIDNAMKISEEKSEQYKIEVDESIRVDGFEEYMEDAKKQLASYNGQLKSTMDTYGIQ 1134 Query: 389 VSGRLPAGVIREMKSR 436 G + +G I EM++R Sbjct: 1135 SEGEIMSGCIIEMRNR 1150 >AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear receptor NHR-53 protein. Length = 365 Score = 29.1 bits (62), Expect = 2.3 Identities = 12/40 (30%), Positives = 16/40 (40%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 CL+C + F C C F R + V+DC N Sbjct: 24 CLICCEVADGHHFGAAACRACAAFFRRTVQLNKVHDCPKN 63 >AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear receptor NHR-53 protein. Length = 366 Score = 29.1 bits (62), Expect = 2.3 Identities = 12/40 (30%), Positives = 16/40 (40%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 CL+C + F C C F R + V+DC N Sbjct: 25 CLICCEVADGHHFGAAACRACAAFFRRTVQLNKVHDCPKN 64 >Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical protein F46C5.7 protein. Length = 199 Score = 28.7 bits (61), Expect = 3.0 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = -1 Query: 361 STNSLPFANPAVFRIHYCN--HSIKVITCAIIDIIFVTFHAKKFITIVTAFIFKLV 200 +++ +PF F ++ C SI ++ CA ++IF F+ I+ +F+F L+ Sbjct: 19 NSSFMPFWRRTAF-VYKCELAFSILILFCAFAELIFYDCFVIFFLMIIASFVFVLL 73 >Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical protein C43C3.2 protein. Length = 498 Score = 28.7 bits (61), Expect = 3.0 Identities = 17/65 (26%), Positives = 28/65 (43%) Frame = -1 Query: 301 SIKVITCAIIDIIFVTFHAKKFITIVTAFIFKLVKCLYQRADQACSQPA*FFWHRFYGHY 122 +I V AI + +FH + + ++ L + LYQ S P F + YG + Sbjct: 313 TIPVGHIAIYTLAICSFHFICWTPYWISILYSLYEELYQDTKSTASPPTYAFIYFMYGVH 372 Query: 121 TAPYV 107 PY+ Sbjct: 373 ALPYI 377 >U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone receptor familyprotein 78 protein. Length = 387 Score = 28.7 bits (61), Expect = 3.0 Identities = 16/58 (27%), Positives = 20/58 (34%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCK 343 C +C + F C C F R D YDC + D +N E CK Sbjct: 3 CAICDSVALSLHFGAPSCKACAAFFRRTVALDITYDCITGTLD---CEVNFERRMACK 57 >AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor NHR-80 protein. Length = 486 Score = 28.7 bits (61), Expect = 3.0 Identities = 13/43 (30%), Positives = 17/43 (39%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFD 298 CL+CS T FE + C C F R + C + D Sbjct: 12 CLICSAQATGFHFEAQSCSACAAFFRRTVALTKSFKCITGRDD 54 >AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone receptor familyprotein 80, isoform b protein. Length = 504 Score = 28.7 bits (61), Expect = 3.0 Identities = 13/43 (30%), Positives = 17/43 (39%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFD 298 CL+CS T FE + C C F R + C + D Sbjct: 30 CLICSAQATGFHFEAQSCSACAAFFRRTVALTKSFKCITGRDD 72 >AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone receptor familyprotein 80, isoform a protein. Length = 486 Score = 28.7 bits (61), Expect = 3.0 Identities = 13/43 (30%), Positives = 17/43 (39%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFD 298 CL+CS T FE + C C F R + C + D Sbjct: 12 CLICSAQATGFHFEAQSCSACAAFFRRTVALTKSFKCITGRDD 54 >AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical protein C09H5.2b protein. Length = 1039 Score = 28.7 bits (61), Expect = 3.0 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 8/77 (10%) Frame = +2 Query: 116 CSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCD----NCDEFLRMKSN----KDNV 271 CS ++I+ VP EL G R + + ++ F EGC C +F ++ K N Sbjct: 559 CSTINIDGVPMELNGKR---MDDFNEAYETFGDEGCRVIGFACKKFRAPATSTFSIKSNT 615 Query: 272 YDCTSNNFDGMIAVMNP 322 + +F GM A+M+P Sbjct: 616 IPMDNWDFLGMSAIMDP 632 >AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical protein C09H5.2a protein. Length = 1054 Score = 28.7 bits (61), Expect = 3.0 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 8/77 (10%) Frame = +2 Query: 116 CSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCD----NCDEFLRMKSN----KDNV 271 CS ++I+ VP EL G R + + ++ F EGC C +F ++ K N Sbjct: 559 CSTINIDGVPMELNGKR---MDDFNEAYETFGDEGCRVIGFACKKFRAPATSTFSIKSNT 615 Query: 272 YDCTSNNFDGMIAVMNP 322 + +F GM A+M+P Sbjct: 616 IPMDNWDFLGMSAIMDP 632 >Z82259-8|CAC70072.3| 410|Caenorhabditis elegans Hypothetical protein C28D4.9 protein. Length = 410 Score = 28.3 bits (60), Expect = 4.0 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +2 Query: 164 RACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 R CLVC K + C+ C F R + Y C +N Sbjct: 13 RRCLVCGDDKASRHYGTVACNGCKGFFRRSVWEKRTYFCIAN 54 >Z81575-10|CAB04640.1| 338|Caenorhabditis elegans Hypothetical protein R08H2.13 protein. Length = 338 Score = 28.3 bits (60), Expect = 4.0 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = -1 Query: 451 AIGNTSTLHFSYYTCWQPSRNRYCINSFTKSTNSLPFAN 335 ++ N + + Y C++P YCI SF K S+ N Sbjct: 286 SLANVVPIAVAIYPCFEPLAAMYCIKSFQKRIFSILTCN 324 >AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormone receptor familyprotein 204 protein. Length = 441 Score = 27.9 bits (59), Expect = 5.2 Identities = 12/42 (28%), Positives = 19/42 (45%) Frame = +2 Query: 167 ACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 AC VC T ++ C+ C F R + + Y C++ N Sbjct: 50 ACQVCYGKATGHHYDVASCNGCKSFFRRVTIEKLKYRCSAGN 91 >Z96048-5|CAB09422.1| 443|Caenorhabditis elegans Hypothetical protein F57A10.5 protein. Length = 443 Score = 27.5 bits (58), Expect = 6.9 Identities = 9/37 (24%), Positives = 15/37 (40%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 CL+C ++ C+ C F R D ++C Sbjct: 47 CLICGNSANGHHYDVASCNGCKTFFRRMCVSDRSFEC 83 >Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical protein ZK662.3b protein. Length = 817 Score = 27.5 bits (58), Expect = 6.9 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Frame = +2 Query: 164 RACLVCSLIKTFD-QFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 + C VC K F F C++C F R +NK+ C N Sbjct: 98 KVCRVCG-DKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFN 139 >Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical protein ZK662.3a protein. Length = 780 Score = 27.5 bits (58), Expect = 6.9 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Frame = +2 Query: 164 RACLVCSLIKTFD-QFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 + C VC K F F C++C F R +NK+ C N Sbjct: 98 KVCRVCG-DKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFN 139 >Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical protein C02B4.2 protein. Length = 396 Score = 27.5 bits (58), Expect = 6.9 Identities = 10/40 (25%), Positives = 17/40 (42%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 C VC + + + C+ C F R ++ Y C +N Sbjct: 31 CSVCGDVASGIHYSVAACNGCKTFFRRVVLENRTYSCKNN 70 >U41104-4|AAK67239.1| 388|Caenorhabditis elegans Nuclear hormone receptor familyprotein 16 protein. Length = 388 Score = 27.5 bits (58), Expect = 6.9 Identities = 12/41 (29%), Positives = 14/41 (34%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 C +C F E C C F R + Y C NN Sbjct: 14 CAICQESAEGFHFGAEACRACAAFFRRTVSNRKTYSCQGNN 54 >AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear receptor NHR-48 protein. Length = 817 Score = 27.5 bits (58), Expect = 6.9 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Frame = +2 Query: 164 RACLVCSLIKTFD-QFEYEGCDNCDEFLRMKSNKDNVYDCTSN 289 + C VC K F F C++C F R +NK+ C N Sbjct: 98 KVCRVCG-DKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFN 139 >AF273808-1|AAG15157.1| 442|Caenorhabditis elegans nuclear receptor NHR-60 protein. Length = 442 Score = 27.5 bits (58), Expect = 6.9 Identities = 9/37 (24%), Positives = 15/37 (40%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 CL+C ++ C+ C F R D ++C Sbjct: 46 CLICGNSANGHHYDVASCNGCKTFFRRMCVSDRSFEC 82 >AF083231-1|AAD03689.1| 388|Caenorhabditis elegans nuclear receptor NHR-16 protein. Length = 388 Score = 27.5 bits (58), Expect = 6.9 Identities = 12/41 (29%), Positives = 14/41 (34%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 C +C F E C C F R + Y C NN Sbjct: 14 CAICQESAEGFHFGAEACRACAAFFRRTVSNRKTYSCQGNN 54 >AC006675-12|AAK84548.1| 418|Caenorhabditis elegans Nuclear hormone receptor familyprotein 99 protein. Length = 418 Score = 27.5 bits (58), Expect = 6.9 Identities = 15/58 (25%), Positives = 22/58 (37%) Frame = +2 Query: 119 SIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 S+ S+++ R +R C +C F C C F R N+ C NN Sbjct: 9 SLSSLDSPLVPTRSMRTCEICDKPSHGKHFGAVTCRACAMFFRRFGRCKNMKPCEMNN 66 >Z81496-8|CAB04068.1| 498|Caenorhabditis elegans Hypothetical protein F09C6.8 protein. Length = 498 Score = 27.1 bits (57), Expect = 9.1 Identities = 20/89 (22%), Positives = 34/89 (38%) Frame = +2 Query: 134 ETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAV 313 E P R C VC D++ C C F R K+ Y C + +I+ Sbjct: 24 EPSPSSKRPTENCKVCGDRPNNDRYGASACLGCTVFFRRAVVKNLKYKCMKEQ-NCLISC 82 Query: 314 MNPEDSWVCKWQRISRFCKGVYAISVSGR 400 C++Q+ F G+++ ++ R Sbjct: 83 TYRNACRYCRFQKC--FAVGMHSSAIQRR 109 >Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical protein C08B6.2 protein. Length = 430 Score = 27.1 bits (57), Expect = 9.1 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 555 LTLLVSEQFILIKY*YIFLFYINTKHFYLWLV 460 +TLL E F ++ ++F FY N K+F+ +++ Sbjct: 379 ITLLDQENFFVL---HLFCFYHNIKYFFYYII 407 >AY305844-1|AAR11988.1| 423|Caenorhabditis elegans nuclear receptor NHR-86 protein. Length = 423 Score = 27.1 bits (57), Expect = 9.1 Identities = 13/41 (31%), Positives = 15/41 (36%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 C +C F E C C F R + D Y C NN Sbjct: 40 CSICREDGDGYHFGAEACRACAAFFRRSVSLDKTYLCRGNN 80 >AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor NHR-66 protein. Length = 618 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 R + AC +C T F + C C F R + Y C Sbjct: 151 RAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSC 192 >AL032626-18|CAA21543.2| 458|Caenorhabditis elegans Hypothetical protein Y37D8A.22 protein. Length = 458 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 115 VQYNVHRNGAKRITRVASMPGLLFD 189 V++N+HR G I AS+P LFD Sbjct: 263 VEHNIHRLGFPGILLFASIPNPLFD 287 >AF273828-1|AAG15177.1| 422|Caenorhabditis elegans nuclear receptor NHR-86 protein. Length = 422 Score = 27.1 bits (57), Expect = 9.1 Identities = 13/41 (31%), Positives = 15/41 (36%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 C +C F E C C F R + D Y C NN Sbjct: 39 CSICREDGDGYHFGAEACRACAAFFRRSVSLDKTYLCRGNN 79 >AF273827-1|AAG15176.1| 421|Caenorhabditis elegans nuclear receptor NHR-86 protein. Length = 421 Score = 27.1 bits (57), Expect = 9.1 Identities = 13/41 (31%), Positives = 15/41 (36%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 C +C F E C C F R + D Y C NN Sbjct: 38 CSICREDGDGYHFGAEACRACAAFFRRSVSLDKTYLCRGNN 78 >AF273826-1|AAG15175.1| 419|Caenorhabditis elegans nuclear receptor NHR-86 protein. Length = 419 Score = 27.1 bits (57), Expect = 9.1 Identities = 13/41 (31%), Positives = 15/41 (36%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 C +C F E C C F R + D Y C NN Sbjct: 36 CSICREDGDGYHFGAEACRACAAFFRRSVSLDKTYLCRGNN 76 >AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor NHR-66 protein. Length = 624 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 R + AC +C T F + C C F R + Y C Sbjct: 155 RAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSC 196 >AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor NHR-66 protein. Length = 619 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 R + AC +C T F + C C F R + Y C Sbjct: 150 RAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSC 191 >AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormone receptor familyprotein 66, isoform b protein. Length = 526 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 R + AC +C T F + C C F R + Y C Sbjct: 57 RAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSC 98 >AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormone receptor familyprotein 66, isoform a protein. Length = 577 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 R + AC +C T F + C C F R + Y C Sbjct: 108 RAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSC 149 >AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone receptor familyprotein 66, isoform d protein. Length = 659 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 R + AC +C T F + C C F R + Y C Sbjct: 190 RAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSC 231 >AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone receptor familyprotein 66, isoform c protein. Length = 733 Score = 27.1 bits (57), Expect = 9.1 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +2 Query: 155 RGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 280 R + AC +C T F + C C F R + Y C Sbjct: 264 RAVPACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSC 305 >AC024771-7|AAK70663.4| 407|Caenorhabditis elegans Nuclear hormone receptor familyprotein 86 protein. Length = 407 Score = 27.1 bits (57), Expect = 9.1 Identities = 13/41 (31%), Positives = 15/41 (36%) Frame = +2 Query: 170 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNN 292 C +C F E C C F R + D Y C NN Sbjct: 24 CSICREDGDGYHFGAEACRACAAFFRRSVSLDKTYLCRGNN 64 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,832,888 Number of Sequences: 27780 Number of extensions: 281329 Number of successful extensions: 1020 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 1001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1019 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1144922904 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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