Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e05
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.9  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   6.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.8  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +1

Query: 193 ESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
           E +G+ N  + K+S SS+ PQI       H GQ   N     KR R
Sbjct: 180 EKAGTNNNNS-KSSQSSNPPQIYPWMKRVHLGQSTVNANGETKRQR 224


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 360 CWIVRIGIW 334
           CWIV IG W
Sbjct: 135 CWIVEIGGW 143


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 481 VKHGWNEERSRDELLKYD 534
           V +GW+E+ +     KYD
Sbjct: 14  VHYGWSEDTTHKYTTKYD 31


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 353 IQHRQQRKQPSKLNLLQ 403
           + +RQ+R QP K++ L+
Sbjct: 19  VNYRQRRSQPLKISCLK 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,659
Number of Sequences: 336
Number of extensions: 3048
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)