Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e05
         (661 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0937 - 24568475-24569145,24569215-24569319,24569419-245699...    28   5.7  
03_05_1157 + 30816143-30816359,30817005-30817120                       28   5.7  

>12_02_0937 -
           24568475-24569145,24569215-24569319,24569419-24569991,
           24570480-24570780,24570867-24572039,24572260-24572328
          Length = 963

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 445 PDISPLLVKNKLVKHGWNEERSRDELLKYDPESND 549
           P++ P  V  + +KH W+E ++  ELLK  P   D
Sbjct: 736 PNVDPDDVSARGLKHVWSEIKAFQELLKQRPIQKD 770


>03_05_1157 + 30816143-30816359,30817005-30817120
          Length = 110

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +1

Query: 160 LRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVV 315
           +R Y   R+P  S+G+ + V + AS + S           +TG  + +P+++
Sbjct: 36  VRGYSILRRPANSTGTVDVVNVGASPNLSTSSAYAAAGIENTGNGEKSPLII 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,677,013
Number of Sequences: 37544
Number of extensions: 291870
Number of successful extensions: 694
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)