BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e05
(661 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537768-1|CAD97831.1| 956|Homo sapiens hypothetical protein pr... 32 2.1
AB033075-1|BAA86563.1| 949|Homo sapiens KIAA1249 protein protein. 32 2.1
AY424277-1|AAR04783.1| 191|Homo sapiens protein tyrosine phosph... 31 3.6
AL109658-7|CAI22734.1| 342|Homo sapiens PTPN1L protein. 31 3.6
U19345-1|AAC36392.1| 935|Homo sapiens AR1 protein. 31 4.8
BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq... 31 4.8
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio... 31 4.8
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein. 31 4.8
AL160060-2|CAH71300.1| 2214|Homo sapiens supervillin protein. 30 8.4
AL160060-1|CAH71301.1| 1788|Homo sapiens supervillin protein. 30 8.4
AL158167-3|CAI15237.1| 2214|Homo sapiens supervillin protein. 30 8.4
AL158167-2|CAI15236.1| 1788|Homo sapiens supervillin protein. 30 8.4
AF109135-1|AAD14682.1| 2214|Homo sapiens archvillin protein. 30 8.4
AF051851-1|AAC64696.1| 1788|Homo sapiens supervillin protein. 30 8.4
AF051850-1|AAC64695.1| 1788|Homo sapiens supervillin protein. 30 8.4
>BX537768-1|CAD97831.1| 956|Homo sapiens hypothetical protein
protein.
Length = 956
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 308 LWSTRGSGYQIPILTIQHRQQRKQPSKLNLL 400
+W R + ILTI H +QP+KLNLL
Sbjct: 168 VWQRRKCSVKNGILTISHATSNRQPAKLNLL 198
>AB033075-1|BAA86563.1| 949|Homo sapiens KIAA1249 protein protein.
Length = 949
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 308 LWSTRGSGYQIPILTIQHRQQRKQPSKLNLL 400
+W R + ILTI H +QP+KLNLL
Sbjct: 161 VWQRRKCSVKNGILTISHATSNRQPAKLNLL 191
>AY424277-1|AAR04783.1| 191|Homo sapiens protein tyrosine
phosphatase non-receptor type substrate protein protein.
Length = 191
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 172 RFQRKPNES--SGSGNQVTIKA-STSSSQPQIIRMPA 273
+FQRKPN SG G + +KA STSS + + PA
Sbjct: 146 KFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPA 182
>AL109658-7|CAI22734.1| 342|Homo sapiens PTPN1L protein.
Length = 342
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 172 RFQRKPNES--SGSGNQVTIKA-STSSSQPQIIRMPA 273
+FQRKPN SG G + +KA STSS + + PA
Sbjct: 244 KFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPA 280
>U19345-1|AAC36392.1| 935|Homo sapiens AR1 protein.
Length = 935
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 127 SESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNP 306
++S+ P +S ++Y P+E+ G G + +T SS+P + + P NP
Sbjct: 116 AKSSGPPGMSSQKRYG---PPHETDGHG----LAEATQSSKPGSVMLRLPGQEDHSSQNP 168
Query: 307 VVVYKRIR 330
+++ +R+R
Sbjct: 169 LIMRRRVR 176
>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA sequence
from clone RP4-669P10 on chromosome 22q13.31-13.33. ).
Length = 1960
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 127 SESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNP 306
++S+ P +S ++Y P+E+ G G + +T SS+P + + P NP
Sbjct: 1198 AKSSGPPGMSSQKRYG---PPHETDGHG----LAEATQSSKPGSVMLRLPGQEDHSSQNP 1250
Query: 307 VVVYKRIR 330
+++ +R+R
Sbjct: 1251 LIMRRRVR 1258
>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
factor 20 (AR1, KIAA0292)) protein.
Length = 1641
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 127 SESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNP 306
++S+ P +S ++Y P+E+ G G + +T SS+P + + P NP
Sbjct: 954 AKSSGPPGMSSQKRYG---PPHETDGHG----LAEATQSSKPGSVMLRLPGQEDHSSQNP 1006
Query: 307 VVVYKRIR 330
+++ +R+R
Sbjct: 1007 LIMRRRVR 1014
>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
Length = 1716
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 127 SESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNP 306
++S+ P +S ++Y P+E+ G G + +T SS+P + + P NP
Sbjct: 954 AKSSGPPGMSSQKRYG---PPHETDGHG----LAEATQSSKPGSVMLRLPGQEDHSSQNP 1006
Query: 307 VVVYKRIR 330
+++ +R+R
Sbjct: 1007 LIMRRRVR 1014
>AL160060-2|CAH71300.1| 2214|Homo sapiens supervillin protein.
Length = 2214
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 151 LSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
++++ R + + S+ + ++VT+ S + + + N T Q NN V YKR+
Sbjct: 1385 VAFMESKRMKVEKMSSNSNFSEVTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLM 1444
Query: 331 L 333
L
Sbjct: 1445 L 1445
>AL160060-1|CAH71301.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 151 LSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
++++ R + + S+ + ++VT+ S + + + N T Q NN V YKR+
Sbjct: 959 VAFMESKRMKVEKMSSNSNFSEVTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLM 1018
Query: 331 L 333
L
Sbjct: 1019 L 1019
>AL158167-3|CAI15237.1| 2214|Homo sapiens supervillin protein.
Length = 2214
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 151 LSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
++++ R + + S+ + ++VT+ S + + + N T Q NN V YKR+
Sbjct: 1385 VAFMESKRMKVEKMSSNSNFSEVTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLM 1444
Query: 331 L 333
L
Sbjct: 1445 L 1445
>AL158167-2|CAI15236.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 151 LSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
++++ R + + S+ + ++VT+ S + + + N T Q NN V YKR+
Sbjct: 959 VAFMESKRMKVEKMSSNSNFSEVTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLM 1018
Query: 331 L 333
L
Sbjct: 1019 L 1019
>AF109135-1|AAD14682.1| 2214|Homo sapiens archvillin protein.
Length = 2214
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 151 LSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
++++ R + + S+ + ++VT+ S + + + N T Q NN V YKR+
Sbjct: 1385 VAFMESKRMKVEKMSSNSNFSEVTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLM 1444
Query: 331 L 333
L
Sbjct: 1445 L 1445
>AF051851-1|AAC64696.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 151 LSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
++++ R + + S+ + ++VT+ S + + + N T Q NN V YKR+
Sbjct: 959 VAFMESKRMKVEKMSSNSNFSEVTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLM 1018
Query: 331 L 333
L
Sbjct: 1019 L 1019
>AF051850-1|AAC64695.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 151 LSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQNNPVVVYKRIR 330
++++ R + + S+ + ++VT+ S + + + N T Q NN V YKR+
Sbjct: 959 VAFMESKRMKVEKMSSNSNFSEVTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLM 1018
Query: 331 L 333
L
Sbjct: 1019 L 1019
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,474,285
Number of Sequences: 237096
Number of extensions: 1677040
Number of successful extensions: 5816
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5812
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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