Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e05
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68219-5|CAJ43449.1|  343|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z68219-4|CAA92482.2|  359|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z81466-3|CAB03867.1|  593|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami...    28   6.8  
U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF047651-2|AAL13318.1|  486|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF047651-1|AAK67207.1|  484|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF016670-9|AAB66107.2|  701|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z68219-5|CAJ43449.1|  343|Caenorhabditis elegans Hypothetical
           protein T05A1.5b protein.
          Length = 343

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 348 RIGIW*PDPL-VDHNRIVLTLASVVWSWHPYYLWLRTRCRSLNCNLVT 208
           +IGIW P PL +  +   L L SV+ +  P Y+   + C   NC+ VT
Sbjct: 59  QIGIWHPYPLFITFSMAFLWLLSVMPTMSPSYMAPSSPCTLDNCSFVT 106


>Z68219-4|CAA92482.2|  359|Caenorhabditis elegans Hypothetical
           protein T05A1.5a protein.
          Length = 359

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 348 RIGIW*PDPL-VDHNRIVLTLASVVWSWHPYYLWLRTRCRSLNCNLVT 208
           +IGIW P PL +  +   L L SV+ +  P Y+   + C   NC+ VT
Sbjct: 75  QIGIWHPYPLFITFSMAFLWLLSVMPTMSPSYMAPSSPCTLDNCSFVT 122


>Z81466-3|CAB03867.1|  593|Caenorhabditis elegans Hypothetical
           protein C09H6.3 protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 266 CQLQTTLANVKTILLWSTRGSGYQIPILT 352
           C+ Q TL NV+ +L WS R SG   P+LT
Sbjct: 335 CRPQKTLHNVRDMLEWSNRTSG---PLLT 360


>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
            protein 10 protein.
          Length = 2302

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 160  LRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQ 297
            LRQ+  QR          Q T  A  S + P+II +P P H    Q
Sbjct: 1492 LRQFSNQRSTVPLKEPARQTTRSAVPSPTVPKIITVPEPAHQTDSQ 1537


>U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical
           protein C29H12.5 protein.
          Length = 706

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/40 (25%), Positives = 25/40 (62%)
 Frame = +2

Query: 290 NVKTILLWSTRGSGYQIPILTIQHRQQRKQPSKLNLLQLS 409
           N+K  L +++R  GY  P++  + ++++ +P  LN+  ++
Sbjct: 136 NLKVSLTFTSRRKGYTPPVILEELQERKPKPQFLNMSNMA 175


>AF047651-2|AAL13318.1|  486|Caenorhabditis elegans Hypothetical
           protein C05D2.10b protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +1

Query: 121 KMSESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQR 294
           K+  +N+PS  S   +    R PN   G        +S+  S    IR+P    TG R
Sbjct: 223 KVPSNNAPSDHSSEEEEEHHRDPNNLLGVVEHNRFTSSSEKSDGHRIRVPVMRLTGHR 280


>AF047651-1|AAK67207.1|  484|Caenorhabditis elegans Hypothetical
           protein C05D2.10a protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +1

Query: 121 KMSESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQR 294
           K+  +N+PS  S   +    R PN   G        +S+  S    IR+P    TG R
Sbjct: 221 KVPSNNAPSDHSSEEEEEHHRDPNNLLGVVEHNRFTSSSEKSDGHRIRVPVMRLTGHR 278


>AF016670-9|AAB66107.2|  701|Caenorhabditis elegans Hypothetical
           protein K02F6.9 protein.
          Length = 701

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +1

Query: 409 KERRFRNMLEMFPDISPLLVKNKLVKHGWNEERSRDELLK 528
           K R   ++++M P+I  + +   L +HG +EE   ++LL+
Sbjct: 256 KSRNLTDLVKMIPEIDWIKILKALARHGTSEE-DEEKLLE 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,699,596
Number of Sequences: 27780
Number of extensions: 263646
Number of successful extensions: 639
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)