BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12e05 (661 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical pr... 31 0.72 Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical pr... 31 0.72 Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 29 2.9 AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 28 6.8 U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 27 8.9 AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 27 8.9 AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 27 8.9 AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical ... 27 8.9 >Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical protein T05A1.5b protein. Length = 343 Score = 31.1 bits (67), Expect = 0.72 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -2 Query: 348 RIGIW*PDPL-VDHNRIVLTLASVVWSWHPYYLWLRTRCRSLNCNLVT 208 +IGIW P PL + + L L SV+ + P Y+ + C NC+ VT Sbjct: 59 QIGIWHPYPLFITFSMAFLWLLSVMPTMSPSYMAPSSPCTLDNCSFVT 106 >Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical protein T05A1.5a protein. Length = 359 Score = 31.1 bits (67), Expect = 0.72 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -2 Query: 348 RIGIW*PDPL-VDHNRIVLTLASVVWSWHPYYLWLRTRCRSLNCNLVT 208 +IGIW P PL + + L L SV+ + P Y+ + C NC+ VT Sbjct: 75 QIGIWHPYPLFITFSMAFLWLLSVMPTMSPSYMAPSSPCTLDNCSFVT 122 >Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical protein C09H6.3 protein. Length = 593 Score = 29.1 bits (62), Expect = 2.9 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +2 Query: 266 CQLQTTLANVKTILLWSTRGSGYQIPILT 352 C+ Q TL NV+ +L WS R SG P+LT Sbjct: 335 CRPQKTLHNVRDMLEWSNRTSG---PLLT 360 >AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family protein 10 protein. Length = 2302 Score = 27.9 bits (59), Expect = 6.8 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +1 Query: 160 LRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQRQ 297 LRQ+ QR Q T A S + P+II +P P H Q Sbjct: 1492 LRQFSNQRSTVPLKEPARQTTRSAVPSPTVPKIITVPEPAHQTDSQ 1537 >U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical protein C29H12.5 protein. Length = 706 Score = 27.5 bits (58), Expect = 8.9 Identities = 10/40 (25%), Positives = 25/40 (62%) Frame = +2 Query: 290 NVKTILLWSTRGSGYQIPILTIQHRQQRKQPSKLNLLQLS 409 N+K L +++R GY P++ + ++++ +P LN+ ++ Sbjct: 136 NLKVSLTFTSRRKGYTPPVILEELQERKPKPQFLNMSNMA 175 >AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical protein C05D2.10b protein. Length = 486 Score = 27.5 bits (58), Expect = 8.9 Identities = 17/58 (29%), Positives = 24/58 (41%) Frame = +1 Query: 121 KMSESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQR 294 K+ +N+PS S + R PN G +S+ S IR+P TG R Sbjct: 223 KVPSNNAPSDHSSEEEEEHHRDPNNLLGVVEHNRFTSSSEKSDGHRIRVPVMRLTGHR 280 >AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical protein C05D2.10a protein. Length = 484 Score = 27.5 bits (58), Expect = 8.9 Identities = 17/58 (29%), Positives = 24/58 (41%) Frame = +1 Query: 121 KMSESNSPSVLSYLRQYRFQRKPNESSGSGNQVTIKASTSSSQPQIIRMPAPNHTGQR 294 K+ +N+PS S + R PN G +S+ S IR+P TG R Sbjct: 221 KVPSNNAPSDHSSEEEEEHHRDPNNLLGVVEHNRFTSSSEKSDGHRIRVPVMRLTGHR 278 >AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical protein K02F6.9 protein. Length = 701 Score = 27.5 bits (58), Expect = 8.9 Identities = 12/40 (30%), Positives = 24/40 (60%) Frame = +1 Query: 409 KERRFRNMLEMFPDISPLLVKNKLVKHGWNEERSRDELLK 528 K R ++++M P+I + + L +HG +EE ++LL+ Sbjct: 256 KSRNLTDLVKMIPEIDWIKILKALARHGTSEE-DEEKLLE 294 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,699,596 Number of Sequences: 27780 Number of extensions: 263646 Number of successful extensions: 639 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 638 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1476380920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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