Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12e03
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC119287-1|AAO38568.1| 218|Caenorhabditis elegans Glutathione s... 30 1.0
Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81479-4|CAB03939.1| 116|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC006723-1|AAF59429.3| 534|Caenorhabditis elegans Hypothetical ... 27 7.4
Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 27 9.7
>AC119287-1|AAO38568.1| 218|Caenorhabditis elegans Glutathione
s-transferase protein34 protein.
Length = 218
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 294 EDETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMASGPNSPVQ-TEQ 464
E+E K++HD++ + + ++ ++ ++ KE + GD + W ++ +A S E
Sbjct: 124 EEEVKRIHDEVYIPVKNLLFKILTRILKESKSEYLVGDGLTWADLVVADHLYSLTNIKEL 183
Query: 465 DIEDIFGDSLKTW 503
D ED +LK +
Sbjct: 184 DPEDPIHLNLKKY 196
>Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical
protein F21H7.1 protein.
Length = 218
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 297 DETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMA 431
+E KQ+HDK+ + + ++ ++ ++ KE GD + W ++ +A
Sbjct: 125 EEVKQIHDKVYIPAKNLMFKILTRILKENKSGFLVGDGLTWADLVVA 171
>Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
+E A+G +P+ + + +F D++ + D AK+N HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387
>Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
+E A+G +P+ + + +F D++ + D AK+N HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387
>Z81479-4|CAB03939.1| 116|Caenorhabditis elegans Hypothetical
protein C34F6.5 protein.
Length = 116
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +3
Query: 414 KNIEMASGPNSP----VQTEQDIEDIFGDSLKTWDHFTDDAKKN 533
+N+E A+GP+ P VQ EQD+E+I D + D +D +N
Sbjct: 37 RNMEHAAGPSPPVEQGVQLEQDLEEII-DIHEVDDEEEEDEDQN 79
>AC006723-1|AAF59429.3| 534|Caenorhabditis elegans Hypothetical
protein Y19D10B.2 protein.
Length = 534
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 408 VWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTD 518
V+ N+E+ GPNS + T + IE IFG + + TD
Sbjct: 135 VFGNVEI--GPNSNLDTMKSIEIIFGSLIINETNLTD 169
>Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical protein
ZK337.1c protein.
Length = 1516
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 KMNVKHHSPVYSVIMKLKKEVDINHGDSVVWKNIEMASGPNSPVQTEQDIE-DIFGDSL 494
+MN++ Y V + +D+N+ S KN+E+ PN V Q D+ GD +
Sbjct: 918 EMNLRVDPQGYKVDRNIPFVIDLNNNSSDFSKNLELI-WPNDVVDGSQKARLDVIGDMM 975
>Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical protein
ZK337.1b protein.
Length = 1501
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 KMNVKHHSPVYSVIMKLKKEVDINHGDSVVWKNIEMASGPNSPVQTEQDIE-DIFGDSL 494
+MN++ Y V + +D+N+ S KN+E+ PN V Q D+ GD +
Sbjct: 921 EMNLRVDPQGYKVDRNIPFVIDLNNNSSDFSKNLELI-WPNDVVDGSQKARLDVIGDMM 978
>Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical protein
ZK337.1a protein.
Length = 1508
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 KMNVKHHSPVYSVIMKLKKEVDINHGDSVVWKNIEMASGPNSPVQTEQDIE-DIFGDSL 494
+MN++ Y V + +D+N+ S KN+E+ PN V Q D+ GD +
Sbjct: 910 EMNLRVDPQGYKVDRNIPFVIDLNNNSSDFSKNLELI-WPNDVVDGSQKARLDVIGDMM 967
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +3
Query: 384 DINHGDSVV-WKNIEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNT 536
D N G S +KN E +GP S V E DS D TD + T
Sbjct: 267 DSNSGSSTSEFKNTETTTGPGSTVSEPSSSERSDLDSSSVSDRSTDSQDRTT 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,962,053
Number of Sequences: 27780
Number of extensions: 187853
Number of successful extensions: 535
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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