Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e01
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   1.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.9  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   5.8  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 388 TGMGRSTTTEDIDDHLMSEE 447
           TGM + T  + IDDH + +E
Sbjct: 154 TGMSKETQQKLIDDHFLFKE 173


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 139 DTTVRERKSTAQAELDHHLNQNVDDGIS 222
           D ++ +  ST  A+LD  L++N+  G+S
Sbjct: 520 DLSLPQLDSTELADLDISLSENLSSGLS 547


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 388 TGMGRSTTTEDIDDHLMSEE 447
           TGM + T  + IDDH + +E
Sbjct: 170 TGMSKETQQKLIDDHFLFKE 189


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = +2

Query: 509 KKWILSPVQNQRRWTR 556
           +KW+++ ++ +R W+R
Sbjct: 33  EKWVVNNIKRKRWWSR 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.130    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,503
Number of Sequences: 438
Number of extensions: 2648
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)