SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12e01
         (639 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil...    37   0.010
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i...    37   0.010
At1g12150.1 68414.m01407 expressed protein contains Pfam profile...    35   0.040
At3g28770.1 68416.m03591 expressed protein                             34   0.092
At4g36105.1 68417.m05139 expressed protein                             33   0.21 
At2g34150.1 68415.m04180 expressed protein                             31   0.65 
At1g44810.1 68414.m05133 expressed protein  contains Pfam profil...    31   0.65 
At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha catal...    30   1.1  
At5g10010.1 68418.m01159 expressed protein                             30   1.1  
At1g22260.1 68414.m02782 expressed protein                             30   1.1  
At1g01690.1 68414.m00087 expressed protein                             30   1.1  
At1g72410.1 68414.m08374 COP1-interacting protein-related simila...    30   1.5  
At1g69070.1 68414.m07903 expressed protein                             30   1.5  
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,...    30   1.5  
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela...    29   2.0  
At3g62620.1 68416.m07034 sucrose-phosphatase-related contains we...    29   2.0  
At5g46070.1 68418.m05665 guanylate-binding family protein contai...    29   2.6  
At4g32190.1 68417.m04581 centromeric protein-related low similar...    29   2.6  
At1g20290.1 68414.m02533 hypothetical protein                          29   2.6  
At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative simil...    29   3.4  
At1g18410.1 68414.m02299 kinesin motor protein-related similar t...    29   3.4  
At5g16500.1 68418.m01928 protein kinase family protein contains ...    28   4.5  
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi...    28   4.5  
At2g22720.3 68415.m02692 expressed protein                             28   4.5  
At2g22720.2 68415.m02691 expressed protein                             28   4.5  
At2g22720.1 68415.m02693 expressed protein                             28   4.5  
At1g68790.1 68414.m07863 expressed protein                             28   4.5  
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016...    28   4.5  
At5g44900.1 68418.m05505 disease resistance protein (TIR class),...    28   6.0  
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos...    28   6.0  
At3g19050.1 68416.m02420 kinesin motor protein-related contains ...    28   6.0  
At1g79150.1 68414.m09229 expressed protein ; expression supporte...    28   6.0  
At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains ...    28   6.0  
At5g60030.1 68418.m07527 expressed protein                             27   7.9  
At5g20610.1 68418.m02448 expressed protein                             27   7.9  
At5g17160.1 68418.m02010 expressed protein                             27   7.9  
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain...    27   7.9  
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic...    27   7.9  
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m...    27   7.9  

>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
           to COP1-interacting protein 4 (CIP4) [Arabidopsis
           thaliana] GI:13160646; supporting cDNA
           gi|13160645|dbj|AB036832.1|;
          Length = 876

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 25/114 (21%), Positives = 52/114 (45%)
 Frame = +1

Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
           D+D+ K + S+++  + K K    ++                D + H+    ++  SL+ 
Sbjct: 447 DADQAKSVKSTKKKSSRKAKTPAKEDTLVDFGAQNVEPIKVVDGEGHVNDIRNVLDSLQQ 506

Query: 472 AKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEALEXIHQN 633
             E    +E +++K   KSS +S + D +N+   A+V   +   KEA E + ++
Sbjct: 507 RTE----VEENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLEKS 556



 Score = 29.9 bits (64), Expect = 1.5
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +1

Query: 370 EAALTSTGMGRSTTTEDIDD-HLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQ 546
           E  +  +G   S  ++  D  +++ E  +  SL+  KEA  NLE    K   KSS K+ +
Sbjct: 511 EENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLE----KSGKKSSKKTKK 566

Query: 547 MDEINLEAGAEV 582
            D +N+   A+V
Sbjct: 567 KDSLNIVEEAQV 578


>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
           identical to cDNA CIP4.1 mRNA for COP1-interacting
           protein 4.1,  GI:13160649
          Length = 976

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 26/114 (22%), Positives = 52/114 (45%)
 Frame = +1

Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
           D+D+ K + S+++  + K K    ++    +           D + H     ++  SL+ 
Sbjct: 597 DADQAKSVKSTKKKSSRKAKTPAKEDTLVDSGAQNVEPIKVVDGEGHDNVIRNVLDSLQQ 656

Query: 472 AKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEALEXIHQN 633
             EA    E +++K   KSS +S + D +N+   A+V   +   KEA E + ++
Sbjct: 657 RNEA----EENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLEKS 706



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +1

Query: 364 DEEAALTSTGMGRSTTTEDIDD-HLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKS 540
           + E  +  +G   S  ++  D  +++ E  +  SL+  KEA  NLE    K   KSS +S
Sbjct: 659 EAEENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLE----KSGKKSSKRS 714

Query: 541 AQMDEINLEAGAEV 582
            + D +N+   A+V
Sbjct: 715 KKKDSLNIVEEAQV 728


>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
           PF05701: Plant protein of unknown function (DUF827);
           expression supported by MPSS
          Length = 548

 Score = 35.1 bits (77), Expect = 0.040
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
 Frame = +1

Query: 343 KVKVKLCDEEA----ALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQ 510
           K+K KL + E+    AL      + T  ED+ + L +    KQS    KE +   E  L+
Sbjct: 75  KIKQKLDNAESTRSRALDDLSKAKKTM-EDLSNKLETVNKSKQSAIDTKETVQQREEQLE 133

Query: 511 KMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEALEXIHQNF 636
                 SP      ++  E       ++D AK+ L  I Q+F
Sbjct: 134 HDKCHGSPPHHHELDVAREQYISTTVELDAAKQQLNKIRQSF 175


>At3g28770.1 68416.m03591 expressed protein 
          Length = 2081

 Score = 33.9 bits (74), Expect = 0.092
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
 Frame = +1

Query: 391 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKM---------DTKSSPKSA 543
           G G S    DI+ +L S+ED+K  ++ AK A +++   L++          +T +S    
Sbjct: 337 GQGESIEDSDIEKNLESKEDVKSEVEAAKNAGSSMTGKLEEAQRNNGVSTNETMNSENKG 396

Query: 544 QMDEINLEAGAEVRKDIDVAKEALEXIHQNFG 639
             +  N +       D D  KE  E  H+N G
Sbjct: 397 SGESTNDKMVNATTNDEDHKKENKEETHENNG 428



 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/72 (25%), Positives = 35/72 (48%)
 Frame = +1

Query: 391 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 570
           G G S     I+ +L S+ED+K  ++ AK   +++  +L +    +   +   +E  +E 
Sbjct: 279 GQGESIGDSAIEKNLESKEDVKSEVEAAKNDGSSMTENLGEAQGNNGVSTID-NEKEVEG 337

Query: 571 GAEVRKDIDVAK 606
             E  +D D+ K
Sbjct: 338 QGESIEDSDIEK 349


>At4g36105.1 68417.m05139 expressed protein
          Length = 245

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
 Frame = +1

Query: 307 KRLTSSR-ENCNEKVKVKLCDEEAALTSTGM-GRSTTTEDIDDHLMSE-EDMKQSLKMAK 477
           +R+T++  E C+ K KV +C+EE    +  +   S   E  +  +M+E E +K +L  + 
Sbjct: 109 RRVTAAESETCSHKEKVIICEEEITRKTVQIQNLSLRLEQTERIVMTECESLKNALTASN 168

Query: 478 EAIANL----ERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
             +  L     R  Q ++ +   KS Q++    +   +V+K
Sbjct: 169 NVLDTLLSSSRRHFQTIEARLVAKSTQLEGEKAQKEVQVQK 209


>At2g34150.1 68415.m04180 expressed protein
          Length = 700

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = +1

Query: 439 SEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEALE 618
           SE +  ++ +  KE   NL  D+ + +T+    +  +DE    A +E+        ++ E
Sbjct: 250 SESENDEAFQATKEVQKNLYNDITEQETEKISNNFSVDETKCAATSELHLSSSPVYKSDE 309

Query: 619 XIHQN 633
            IHQ+
Sbjct: 310 LIHQD 314


>At1g44810.1 68414.m05133 expressed protein  contains Pfam profile:
           PF04504 protein of unknown function, DUF573
          Length = 296

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 16/65 (24%), Positives = 37/65 (56%)
 Frame = +1

Query: 403 STTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEV 582
           ++++ED+D+ + S ED K+ +  +  + +  E +L+ + T++   S   +   L++G+E 
Sbjct: 15  ASSSEDVDEEISSGEDEKEHI--SNSSSSEEENELKDLSTQTL-NSPSTEAPTLDSGSET 71

Query: 583 RKDID 597
             D D
Sbjct: 72  NSDSD 76


>At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha
           catalytic subunit, putative similar to SP|O48653 DNA
           polymerase alpha catalytic subunit (EC 2.7.7.7) {Oryza
           sativa}; contains Pfam profiles: PF03175 DNA polymerase
           type B, organellar and viral, PF00136 DNA polymerase
           family B, PF03104 DNA polymerase family B, exonuclease
           domain
          Length = 1492

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 421 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQM-DEINLEAGAEVRKDID 597
           +D+ LM EEDMK+S  +  E +  L  D+ K D  +  +  ++  E+ ++    +   ID
Sbjct: 239 MDNELMKEEDMKESEVIPSETMELLGSDIVKEDGSNKIRKTEVKSELGVKEVFTLNATID 298

Query: 598 VAKE 609
           + ++
Sbjct: 299 MKEK 302


>At5g10010.1 68418.m01159 expressed protein 
          Length = 434

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 1/162 (0%)
 Frame = +1

Query: 136 SDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRL 315
           +D  + E   T Q E   H  + VD+   NG    AK     ++        + +E +  
Sbjct: 24  NDEVIEETTKTTQEESQQHEEEVVDEVKENGEEEEAKGDQEEEEDAKPDSLEEDEENQED 83

Query: 316 TSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANL 495
               E   E+V+ K              + T  +D +   + +    ++ K+ +E +   
Sbjct: 84  EVKAEEVKEEVEKKPVARRGGKRKRATKKDTEIKD-EKKPVPKAKKPRAAKVKEEPVYFE 142

Query: 496 E-RDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEALE 618
           E R L+ +   + P   + D+  L+A  E   D    +EALE
Sbjct: 143 EKRSLEDLWKVAFPVGTEWDQ--LDALYEFNWDFQNLEEALE 182


>At1g22260.1 68414.m02782 expressed protein
          Length = 857

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
 Frame = +1

Query: 283 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE------ 444
           L+R +  ++ L S+    NEK+ V+L +++ +L S   G   +T    D L SE      
Sbjct: 347 LFRVAATKEALESAGNELNEKI-VELQNDKESLISQLSGLRCSTSQTIDKLESEAKGLVS 405

Query: 445 --EDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
              D + ++   KE +  L   ++  + K    S ++  + +E+  +  K
Sbjct: 406 KHADAESAISQLKEEMETLLESVKTSEDKKQELSLKLSSLEMESKEKCEK 455



 Score = 27.5 bits (58), Expect = 7.9
 Identities = 29/117 (24%), Positives = 54/117 (46%)
 Frame = +1

Query: 265 KKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE 444
           KK   H+Y  + EEK   +  EN   +V+ K   E+  L      + ++T+ + D L   
Sbjct: 70  KKSMEHVY--ALEEKLQNAFNENAKLRVRKK---EDEKLWRGLESKFSSTKTLCDQLT-- 122

Query: 445 EDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEAL 615
               ++L+     + + E+D    +TK S  S  +D +N +   ++   +D AKE +
Sbjct: 123 ----ETLQHLASQVQDAEKDKGFFETKFSTSSEAIDSLNQQM-RDMSLRLDAAKEEI 174


>At1g01690.1 68414.m00087 expressed protein
          Length = 742

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/69 (23%), Positives = 34/69 (49%)
 Frame = +1

Query: 151 RERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRE 330
           R+++S  + E+D+  N + D  +   ++LH     I++K    H  R    +KRL   ++
Sbjct: 389 RKKRSPQEEEVDNENNSSEDSRLMGAKNLHLFLSEIMRKL--KHAIRKEKPDKRLLGKKK 446

Query: 331 NCNEKVKVK 357
           +  + +  K
Sbjct: 447 SFEKSLSTK 455


>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
           to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
           thaliana] GI:3327870
          Length = 1163

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
 Frame = +1

Query: 133 FSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKR 312
           F   TV E K  A     HHL    D+  S   SL  ++P ++  K    L    +   +
Sbjct: 162 FDPHTVSELKQFADRFSAHHL----DEACSKYISLWKQRPDLIDMKYSNQLAGVDNVSLQ 217

Query: 313 LTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED-IDDHLMSEEDMKQSLKMAKEAIA 489
             S+R+  N   + +   ++ A TST       T+D +D    + +  + + +++ +   
Sbjct: 218 KDSTRQKQNAVNESEHQIQQCATTSTKRNEEEKTDDSLDVTSSTVKTTQHTRRLSVQDRI 277

Query: 490 NLERDLQKMDTKS 528
           NL  + QK ++ S
Sbjct: 278 NLFENKQKENSPS 290


>At1g69070.1 68414.m07903 expressed protein
          Length = 901

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
 Frame = +1

Query: 244 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVK----LCDEEAALTSTG-MGRST 408
           K  + + K+IG       + +K +  S+     K+  K    L D E  +   G +G S+
Sbjct: 84  KSSVFLDKRIGEQNDELGEFDKGIIRSQRQRQLKLAKKSMYNLSDGEEDVYEDGALGGSS 143

Query: 409 TTEDIDDHLMSEEDMK------QSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 570
             +D D  L+S+ED++       + K  K    N E D    + +   K   M+EI +++
Sbjct: 144 VKDDFDSGLLSDEDLQDDDLEASASKRLKHLNRNREVDASGEEERRKSKKEVMEEIIMKS 203


>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
           PF04950: Protein of unknown function (DUF663)
          Length = 793

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +1

Query: 292 DSDEEKRLTSSRENCNEK--VKVKLCDEEAALTSTGMGRSTTTED--IDDHLMSEEDMKQ 459
           DSD+   +    E+ N++     +  D+  +L    +   T  E   +DD  ++EE +K 
Sbjct: 407 DSDDNGMVLDRGEDSNQEGMYDQEFEDDGKSLNLRDIDTETQNESEMVDDEDLTEEQIKD 466

Query: 460 SLKMAKEAIANLERDLQKMDT 522
            +K  KEA A+ E    +++T
Sbjct: 467 EIKKIKEAYADDEEFPDEVET 487


>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
            low similarity to nuclear matrix constituent protein 1
            (NMCP1) [Daucus carota] GI:2190187
          Length = 1042

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = +1

Query: 292  DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL-- 465
            D +  +R  +  ++  E++KV+    E         R     +I++ L   E++K +L  
Sbjct: 719  DRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEE-LKKLENLKVALDD 777

Query: 466  -KMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAG 573
              MAK  ++NLER  +K+        ++ DE++L+ G
Sbjct: 778  MSMAKMQLSNLERSWEKVSALKQKVVSRDDELDLQNG 814


>At3g62620.1 68416.m07034 sucrose-phosphatase-related contains weak
           similarity to sucrose-phosphatase [Arabidopsis thaliana]
           gi|11127757|gb|AAG31075
          Length = 358

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/69 (24%), Positives = 36/69 (52%)
 Frame = +1

Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
           DS  E+   ++ +N     ++ L  EEA+    GM  ++  ED+D  L+ +  + + L++
Sbjct: 281 DSILEELNDATVDNSQWTAEIVLEAEEASKNQMGMRITSCLEDLDKQLLMQRILGKDLEV 340

Query: 472 AKEAIANLE 498
              ++ +LE
Sbjct: 341 LLHSVMHLE 349


>At5g46070.1 68418.m05665 guanylate-binding family protein contains
            Pfam domains PF02263: Guanylate-binding protein,
            N-terminal domain and PF02841: Guanylate-binding protein,
            C-terminal domain
          Length = 1060

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +1

Query: 262  KKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI--DDHL 435
            KK + Y    +  E++++   ++  +E  +     E          R+T   D    D +
Sbjct: 732  KKALAYEKEANKLEQEKIRMEQKYRSEFQRFDEVKERCKAAEIEAKRATELADKARTDAV 791

Query: 436  MSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEIN 561
             S+++  +S ++A E +A +ER  ++++     K+   DE++
Sbjct: 792  TSQKEKSESQRLAMERLAQIERAERQVENLERQKTDLEDELD 833


>At4g32190.1 68417.m04581 centromeric protein-related low similarity
           to SP|Q02224 Centromeric protein E (CENP-E protein)
           {Homo sapiens}
          Length = 783

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = +1

Query: 364 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSA 543
           D EAAL +  + R     D +  L+S+   K  L  AKE +   E+ + +   K      
Sbjct: 113 DLEAALVAL-LKREEDLHDAERKLLSD---KNKLNRAKEELEKREKTISEASLKHESLQE 168

Query: 544 QMDEINLEAGAEVRKDIDVAKEAL 615
           ++   N+E  ++ R +I+  K  L
Sbjct: 169 ELKRANVELASQAR-EIEELKHKL 191


>At1g20290.1 68414.m02533 hypothetical protein
          Length = 382

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
 Frame = +1

Query: 97  EHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQ-NVDDGISNGRSLHAKKPIIVKKKI 273
           EH D FK  +  +S     E K  A A   H LNQ N  D  SN      +  +IV KKI
Sbjct: 95  EH-DQFKWKHV-YSHIGSAEEKDGAVAIWLHSLNQRNYPDLRSNECK---RNEVIVYKKI 149

Query: 274 GYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTG--MGRSTTTED 420
           G     +  EEK   + +EN N   ++ + D+    TS G  M   TT E+
Sbjct: 150 GEASEENIHEEK--ITVKENTNGNAELFVVDKVNDETSEGTIMEERTTLEE 198


>At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative similar
           to HEMA2 [SP|P49294], HEMA1 [SP|P42804]
          Length = 524

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
 Frame = +1

Query: 58  VIYTIIAA--PAQLGEHLDTFKTLNGDFS----DTTVRERKSTAQAELDHHLNQNVDD-- 213
           VI+T  ++  P  L EH++       D++    D +V     +  AELD     NVDD  
Sbjct: 329 VIFTSTSSETPLFLKEHVEILPPCPADYARLFVDISVPRNVGSCVAELDSARVYNVDDLK 388

Query: 214 -GISNGRSLHAKK-----PIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEA 375
             ++  +   A+K     PII ++ I +  +RDS +         +  E+++ +  ++  
Sbjct: 389 EVVAANKEDRARKSMEALPIIREETIEFEGWRDSLQTFPTIRKLRSKTERIRAECVEKLI 448

Query: 376 ALTSTGMGRST 408
           +    GM + T
Sbjct: 449 SKHGNGMDKKT 459


>At1g18410.1 68414.m02299 kinesin motor protein-related similar to
           kinesin-related protein GB:AAF24855 GI:6692749 from
           [Arabidopsis thaliana]
          Length = 1140

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = +1

Query: 412 TEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDE 555
           T  I+D +   E M++   +A++A+    R+L+KM  ++      ++E
Sbjct: 391 TAGIEDRVKELEQMRKDASVARKALEERVRELEKMGKEADAVKMNLEE 438


>At5g16500.1 68418.m01928 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 636

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 22/83 (26%), Positives = 41/83 (49%)
 Frame = +1

Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
           DSD+E    S ++   E+ +++   E ++ +S      +    ID+         QSLK+
Sbjct: 437 DSDDESDSNSEKDQEEEQSQLEKARESSSSSSDS---GSERRSIDE----TNATAQSLKI 489

Query: 472 AKEAIANLERDLQKMDTKSSPKS 540
           +    ++ E D +K+ +KSS KS
Sbjct: 490 SYSNYSSEEEDNEKLSSKSSCKS 512


>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
           PF00076 RNA recognition motif
          Length = 636

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
 Frame = +1

Query: 106 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHL 285
           D+    + D     V+++ +T   +     + + ++  S+     AKKP +VK       
Sbjct: 236 DSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKN--AKPA 293

Query: 286 YRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL 465
            +DS   +  +   E+ +EK   K   +    + T    S++ E  D+    +E+ K   
Sbjct: 294 AKDSSSSEEDSDEEESDDEKPPTK---KAKVSSKTSKQESSSDESSDE--SDKEESKDEK 348

Query: 466 KMAKEAIANLER-DLQKMDTKSSPKS 540
              K+  +++E  D ++      PK+
Sbjct: 349 VTPKKKDSDVEMVDAEQKSNAKQPKT 374


>At2g22720.3 68415.m02692 expressed protein
          Length = 569

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +1

Query: 124 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 273
           NG  +  +   R + A+  +DH    +  +G+  GRS    +P+  K  +
Sbjct: 356 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 405


>At2g22720.2 68415.m02691 expressed protein
          Length = 672

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +1

Query: 124 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 273
           NG  +  +   R + A+  +DH    +  +G+  GRS    +P+  K  +
Sbjct: 459 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 508


>At2g22720.1 68415.m02693 expressed protein
          Length = 340

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +1

Query: 124 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 273
           NG  +  +   R + A+  +DH    +  +G+  GRS    +P+  K  +
Sbjct: 127 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 176


>At1g68790.1 68414.m07863 expressed protein
          Length = 1085

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 25/90 (27%), Positives = 44/90 (48%)
 Frame = +1

Query: 355 KLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSP 534
           KL   EAAL     G     +D+D  L + ++ +++LK A+E   ++E + + ++ K   
Sbjct: 402 KLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALK-AEEKKLHMENE-RLLEDKECL 459

Query: 535 KSAQMDEINLEAGAEVRKDIDVAKEALEXI 624
           +  + DEI  E G E  K     +E  E +
Sbjct: 460 RKLK-DEIE-EIGTETTKQESRIREEHESL 487


>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
            reticulocyte binding protein; similar to  Myosin heavy
            chain, non-muscle (Zipper protein) (Myosin II)
            (SP:Q99323) {Drosophila melanogaster} similar to EST
            gb|T76116
          Length = 1730

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = +1

Query: 355  KLCDEEAALTSTGMGRSTTTEDIDDHLMSEED----MKQSLKMAKEAIANLERDLQKMDT 522
            K+  E  ALTS      T  + ++D L + ED    + +  +  + A  N E +LQK   
Sbjct: 861  KVKSEVDALTSKLAETQTALKLVEDALSTAEDNISRLTEENRNVQAAKENAELELQKAVA 920

Query: 523  KSSPKSAQMDEI 558
             +S  ++++DE+
Sbjct: 921  DASSVASELDEV 932


>At5g44900.1 68418.m05505 disease resistance protein (TIR class),
           putative domain signature TIR exists, suggestive of a
           disease resistance protein.
          Length = 274

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = +1

Query: 175 AELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKV 354
           A L  ++N  +DD    GR L      I + ++   ++      K  T+SR   +E  K+
Sbjct: 40  ALLKENVNVFIDDHELRGRDLDHLFSRIEESRVALTIF-----SKNFTNSRWCLDELAKI 94

Query: 355 KLCDEEAALTSTGMGRSTTTEDI 423
           K C ++ +LT   +     T+D+
Sbjct: 95  KECVDQESLTVIPIFFKMKTDDV 117


>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
           identical to CIP1 (GI:836950) [Arabidopsis thaliana]
          Length = 1305

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
 Frame = +1

Query: 238 HAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTE 417
           H ++     K++  H+          T S  N  E+ K+ L  + A L++       T +
Sbjct: 60  HERESSSQVKELEAHIESSEKLVADFTQSLNNAEEEKKL-LSQKIAELSNEIQEAQNTMQ 118

Query: 418 DIDDHLMSEE-DMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDI 594
           +    LMSE   +K+S  + +  + +L RD+ ++  + S   A   E  LE+  +   D+
Sbjct: 119 E----LMSESGQLKESHSVKERELFSL-RDIHEIHQRDSSTRASELEAQLESSKQQVSDL 173

Query: 595 DVAKEALE 618
             + +A E
Sbjct: 174 SASLKAAE 181


>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
            profile: PF00225 Kinesin motor domain; contains
            non-consensus splice site (GC) at intron 12
          Length = 2722

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 445  EDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKE 609
            ++    L  AK+ I  LER+     T+ +  S  + E+NL A A+  + +   KE
Sbjct: 2315 DEKHMDLAQAKKHIEALERNTADQKTEITQLSEHISELNLHAEAQASEYMHKFKE 2369


>At1g79150.1 68414.m09229 expressed protein ; expression supported
           by MPSS
          Length = 495

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +1

Query: 424 DDHLMSEEDMKQSLKMAKEAIANLERDLQK---MDTKSSPKSAQMDEINLEAGAE 579
           D+H++++   ++  K +K      E+DL      + + +P++A + E+  E  AE
Sbjct: 130 DEHVLNKSQRREKAKKSKREAKKHEKDLPDEILQEEEETPQAAVLAEVKEELSAE 184


>At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains
           similarity to NAD kinase [Homo sapiens]
           gi|20070086|gb|AAM01195; contains Pfam domain, PF01513:
           ATP-NAD kinase
          Length = 985

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +1

Query: 247 KPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID 426
           K +++ KK+G  L  ++ E       +EN N  V+ ++ D  A +   G  ++   +D  
Sbjct: 678 KTVLLLKKLGQELMEEAKEAASFLYHQENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTS 737

Query: 427 D 429
           D
Sbjct: 738 D 738


>At5g60030.1 68418.m07527 expressed protein
          Length = 292

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +1

Query: 289 RDSDEEKRLTSSRENC-NEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE-EDMKQS 462
           R  +++K+  +  E+  +EKVK KL DE+ +       +  + ++ D+ ++ E E ++  
Sbjct: 149 RKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDE 208

Query: 463 LKMAKEAIANLERDLQKMDTKSSPK 537
            K A+       +D   +D K   K
Sbjct: 209 QKSAEIKEKKKNKDEDVVDEKEKEK 233


>At5g20610.1 68418.m02448 expressed protein
          Length = 1164

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 364 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 507
           D E+AL S  M  +T +ED +D     +  K  +   KE + +  RD+
Sbjct: 503 DLESALKSVEMLEATASEDEEDRKKHGDKDKYFITPMKETVPSCSRDV 550


>At5g17160.1 68418.m02010 expressed protein
          Length = 569

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
 Frame = +1

Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED----ID-DHLMSEEDMK 456
           D+ + K   + +EN +E  K+   DEE  +  T     T  E+    +D D  +SE D  
Sbjct: 360 DAGDSKTKQAIQENDSEPEKINNFDEETMVDQTDSDSETEPEENHSGVDSDGTISEADSN 419

Query: 457 QSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEALEXIHQNF 636
           Q+  +    IA+ E  L    ++ S  +A      LE  A+V K   V+  A+E I   F
Sbjct: 420 QA--VVGSDIADEEMTLS--GSEGSAATAPNSPPRLEE-AKVIKTTLVSPFAVESISTQF 474


>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
           Pfam profiles PF03469: XH domain, PF03468: XS domain
          Length = 456

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 20/116 (17%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
 Frame = +1

Query: 259 VKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLM 438
           ++++   H+ +  D+ +RLT   E+  +K+++K  +        G  R   +ED++    
Sbjct: 168 IQERTMRHIQKIVDDHERLTKLLESEKKKLEIKGNELAKPQVHNGTERMKLSEDLEQR-Q 226

Query: 439 SEEDMKQSLKMAK--EAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDV 600
            EE  ++ +++ +  + +  +E +++++  + +     M  +  +  A+V K++D+
Sbjct: 227 KEELHEKIIRLERQIDQVQAIELEVEQLKGQLN----VMKHMASDGDAQVVKEVDI 278


>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
           to heat shock protein 101 GI:6715468 GB:AAF26423 from
           [Arabidopsis thaliana]
          Length = 911

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/63 (22%), Positives = 31/63 (49%)
 Frame = +1

Query: 448 DMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDVAKEALEXIH 627
           +++  L    E I NLER   +++ +      + D+ +     EVRK++D  ++ L+ + 
Sbjct: 401 NVRVQLDSQPEEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLT 460

Query: 628 QNF 636
             +
Sbjct: 461 MKY 463


>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
           myosin heavy chain (GI:1408194) {Placopecten
           magellanicus}; similar to Myosin heavy chain, clone 203
           (Fragment) (SP:P39922){Hydra attenuata}; contains one
           transmembrane domain
          Length = 323

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
 Frame = +1

Query: 415 EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQ-----KMDTKSSPKSAQMDEINLEAG-A 576
           E ID+      D+K+ +K  +  +A  + +LQ     KM  + S K ++   + LE+   
Sbjct: 197 EKIDNKEKEVHDLKEKIKSLESDVAKGKTELQKWITEKMVVEDSLKDSEKKVVALESEIV 256

Query: 577 EVRKDIDVAKEALEXI 624
           E++K +D A++ +  +
Sbjct: 257 ELQKQLDDAEKMINGL 272


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.315    0.130    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,402,838
Number of Sequences: 28952
Number of extensions: 201232
Number of successful extensions: 815
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

- SilkBase 1999-2023 -