Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d23
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   5.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 442 SSMYCIIAIDSTKVTPSISRAGTFCAGLMAL-YSSVSCLPVFTISTGRSSKGMLFACSI 269
           S ++C++  +  +    +S+A +FC  + AL Y SV+   +  + T  ++  +L   S+
Sbjct: 20  SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTFFALSELLTDLATSILLKVSSL 78


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 161 IFCAVSVYDCFLTREDL 111
           + C VS   C+L R +L
Sbjct: 225 LLCVVSTLSCYLERTEL 241


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 336 AVYQFLQYPPDVLRKVCFLHVALLEHATNTKTANRRAKSHDFQ 208
           A++   +YP   +R+   L + L E        NRRAK    Q
Sbjct: 86  ALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 128


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 443 YET*TETHARHSTTTRPYERNMRDY-CI 523
           Y+   E H R+   ++P++ N  DY C+
Sbjct: 242 YKHHLEYHLRNHAGSKPFQCNKCDYTCV 269


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 251 TRRQPIGVQNHTIFNH 204
           T  QP+G Q H   NH
Sbjct: 188 TSSQPVGTQIHQQTNH 203


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 265 EQCYMQKAYLSKNVRWIL*KLVN 333
           E+ ++  AY+SK  RW L + +N
Sbjct: 259 EKEFLFNAYVSKQKRWELARNLN 281


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 173  YYSTIFCAVSVYDCFLT 123
            YY+TIF  ++    F+T
Sbjct: 1218 YYATIFTIITATSSFVT 1234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,545
Number of Sequences: 336
Number of extensions: 2600
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)