BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12d23 (551 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 4.8 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 6.3 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 6.3 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 6.3 AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 6.3 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 8.3 AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.3 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 21.8 bits (44), Expect = 4.8 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -3 Query: 342 QLAVYQFLQYPPDVLRKVC 286 Q VYQF+ P D++ C Sbjct: 533 QRLVYQFVDVPKDIIEIDC 551 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 21.4 bits (43), Expect = 6.3 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -3 Query: 381 LVLFALD*WLCTLQLAVYQFLQYPPDVLRKVCFLHVALL 265 L+L LD CT++ + + P +LRK L +A++ Sbjct: 384 LILIGLDSQFCTVEGFITAAVDEWPRLLRKRKELFIAIV 422 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 21.4 bits (43), Expect = 6.3 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -3 Query: 381 LVLFALD*WLCTLQLAVYQFLQYPPDVLRKVCFLHVALL 265 L+L LD CT++ + + P +LRK L +A++ Sbjct: 437 LILIGLDSQFCTVEGFITAAVDEWPRLLRKRKELFIAIV 475 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 21.4 bits (43), Expect = 6.3 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +2 Query: 263 SSNATCKKHTFRRTSGG 313 S++ TC HT R +GG Sbjct: 287 SASTTCSGHTVRCFTGG 303 >AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate receptor protein. Length = 1040 Score = 21.4 bits (43), Expect = 6.3 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -2 Query: 169 IQQFFAPFLFTIVFS 125 IQ+F A F FT+V++ Sbjct: 723 IQRFAAGFCFTVVYA 737 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 21.0 bits (42), Expect = 8.3 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -1 Query: 122 REDLHYLLCQNMIRYILSVK 63 R+ Y+L QN++ Y L K Sbjct: 416 RDPAFYMLYQNILSYFLRYK 435 >AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-synthase protein. Length = 504 Score = 21.0 bits (42), Expect = 8.3 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +2 Query: 269 NATCKKHTFRRTSGGYCK 322 NAT HT R +G Y K Sbjct: 17 NATNSPHTCRTKNGDYTK 34 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 152,248 Number of Sequences: 438 Number of extensions: 3360 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15827139 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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