Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d22
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.45 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   9.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 180 VCKRIVYGWVTKRIVF 133
           +CK   +G++TK+++F
Sbjct: 525 ICKNFCFGFITKQLIF 540


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 180 PVGSASCTEYKQCYTWFRRLQ 242
           P+G  SC  Y QC   + RLQ
Sbjct: 165 PLGK-SCNRYWQCQGGYPRLQ 184


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 331  PASSQYTRPAQQASAPPPNFTT 396
            P+    T+P +  +  PP  TT
Sbjct: 998  PSREDCTKPPEPVTPAPPQVTT 1019


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 88  KLNNSAENLLRMSKFEDNPFSDPTIDNPFAD 180
           ++NN+ E L  MS  + +   DP +    A+
Sbjct: 54  EVNNTPEILQLMSDLKQHQSDDPVLSQIIAN 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,157
Number of Sequences: 336
Number of extensions: 1877
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)