Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d22
         (460 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0045 - 27304696-27305299,27305392-27305521,27305625-27305760     27   7.3  
02_04_0597 - 24198112-24198462,24199249-24199389,24200322-242005...    27   9.6  
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164...    27   9.6  
01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320     27   9.6  
01_01_0715 - 5542648-5543219,5543352-5543544                           27   9.6  

>05_07_0045 - 27304696-27305299,27305392-27305521,27305625-27305760
          Length = 289

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 325 SPPASSQYTRPAQQASAPPPNFTTAD 402
           +PPA++    P   A  PPP   TAD
Sbjct: 185 APPAAAAAASPTDLAPVPPPATVTAD 210


>02_04_0597 -
           24198112-24198462,24199249-24199389,24200322-24200537,
           24200626-24201561,24201655-24201816,24202026-24202304,
           24202399-24203171,24206142-24207363
          Length = 1359

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 275 PRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLHQISQL 397
           P+L +S++H+  +C L  H     T +P  RL   + +S+L
Sbjct: 727 PKLVDSSEHSLAACALLDHLQKPDT-EPSLRLPVFNALSEL 766


>01_07_0303 +
           42615578-42615709,42616273-42616312,42616393-42616477,
           42616634-42616813,42618274-42618354,42618890-42619011,
           42619867-42620723,42621656-42621897,42622107-42622200,
           42622306-42622476,42622695-42622740,42624101-42624111,
           42624141-42624392
          Length = 770

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 404 KSAVVKFGGGAEACCAGLVY 345
           +SAV  FGGG  AC    VY
Sbjct: 614 RSAVESFGGGGRACIMARVY 633


>01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320
          Length = 313

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 322 VSPPASSQYTRPAQQASAPPP 384
           V PP    Y RP   A+APPP
Sbjct: 26  VPPPYYHSYPRPPPGAAAPPP 46


>01_01_0715 - 5542648-5543219,5543352-5543544
          Length = 254

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 460 LPAAPTPRPSVLAPLAAS 407
           +PAAPTPRPS   P A +
Sbjct: 151 VPAAPTPRPSPPPPAAGT 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,301,134
Number of Sequences: 37544
Number of extensions: 207039
Number of successful extensions: 820
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)