Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d22
         (460 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   4.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +2

Query: 269 INPRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLHQI 388
           I+P L+ S QH  Q+    +   ++ T D      R++ +
Sbjct: 196 IDPELTESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSL 235


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +2

Query: 269 INPRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLHQI 388
           I+P L+ S QH  Q+    +   ++ T D      R++ +
Sbjct: 234 IDPELTESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSL 273


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 185 DGSAKGLSMVGSLNGLSSNLDIL 117
           DG  + L +VG L G++S +  L
Sbjct: 729 DGKFQVLQLVGMLRGIASGMQYL 751


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +1

Query: 136 DNPFSDPTI----DNPFADPSVQQVARSTNNATRGLED 237
           DNP S   +    +NPF+D   ++V+++  N+ + + D
Sbjct: 313 DNPESTGNLVYIYNNPFSDVEERRVSKTAMNSNQIVSD 350


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +2

Query: 146 LVTQP*TILLQTRRFSKLHGVQTMLHVV*KTTILSTANKMLIN 274
           L  +P  I+L         G+    H++   T   T+N  LIN
Sbjct: 462 LEKEPYVIILDDEHDDAFIGIVNQFHILQFITKNGTSNNYLIN 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,087
Number of Sequences: 438
Number of extensions: 2066
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)