Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d21
         (308 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   0.97 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   3.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   5.2  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 74  FLXSDFHDXSLDRLFSCFILFNKI 3
           F+   F + +L RL +C I FN+I
Sbjct: 131 FINLPFLEHNLIRLKNCVIYFNRI 154


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 220 LVW*VTHXAFXXYLLTGLLTSKIATKPL 137
           + W V H     Y +T  L  K+ T PL
Sbjct: 306 VAWIVLHLIRLMYQVTTNLVLKLLTSPL 333


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 182 FIDRPINFKNCYKTTFYSKL 123
           FID+ +N +N     FY  +
Sbjct: 55  FIDKKLNNRNSKSRVFYENV 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,443
Number of Sequences: 336
Number of extensions: 497
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)