Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d20
         (506 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   3.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   4.5  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.9  

>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 325 AGVKTVLILNNVFFCKSTFFI*CLKSYSAKK 417
           A  K V +   VF+C S  FI C +++ A K
Sbjct: 333 ATYKEVGLFVIVFYCMSLLFIICNEAHHASK 363


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -3

Query: 111 VLFAGKRDTRCNQPSAVRTMKRCNHNGLFIYFPTFF 4
           VL+  KR T C    A   +      G+FI  P FF
Sbjct: 221 VLYPLKRQTMCTVRRAKIVIFALTIAGIFISLPIFF 256


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +2

Query: 47  RFIVLTADGWLHL 85
           + +++  DGWLH+
Sbjct: 270 KIVIVATDGWLHM 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,924
Number of Sequences: 2352
Number of extensions: 9208
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)