Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12d20
         (506 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41990-3|AAY44010.1|  291|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z93239-1|CAB07528.1|  512|Caenorhabditis elegans Hypothetical pr...    28   4.5  

>U41990-3|AAY44010.1|  291|Caenorhabditis elegans Hypothetical
           protein F52B10.2 protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 332 TPAYFHYKSAPER-KVFEISLPIVSVPRKP 246
           +PAYFH K APER K    +  I+ V R P
Sbjct: 92  SPAYFHSKMAPERIKSLNPNTKIIIVVRDP 121


>Z93239-1|CAB07528.1|  512|Caenorhabditis elegans Hypothetical
           protein H03A11.1 protein.
          Length = 512

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 140 RGAP*ILISVNVSS*LFEKLSKHFKMYFFISESAGRVFVAR 262
           R  P +   +N+++ LFEK  K  K  FF S +    FV+R
Sbjct: 232 RAIPTVGRVLNMTTELFEKAEKKLKKTFFFSPAKNFCFVSR 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,201,188
Number of Sequences: 27780
Number of extensions: 226516
Number of successful extensions: 527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)