BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12d17 (538 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical p... 28 4.9 Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical p... 28 4.9 U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 27 6.5 >Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical protein F28H7.10a protein. Length = 841 Score = 27.9 bits (59), Expect = 4.9 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = -3 Query: 194 LARAALLSHGGGCGLKSPMKQRLLPTRVVDGRVIGEEQHCSC*L*REALHRIYHR 30 L +A L GGG G KS K R + V + +GE C L ALH + R Sbjct: 126 LKKALKLLDGGGKGGKSESKYREMVWSVDERGSMGENLLAICLLQGSALHNLIAR 180 >Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical protein F28H7.10a protein. Length = 841 Score = 27.9 bits (59), Expect = 4.9 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = -3 Query: 194 LARAALLSHGGGCGLKSPMKQRLLPTRVVDGRVIGEEQHCSC*L*REALHRIYHR 30 L +A L GGG G KS K R + V + +GE C L ALH + R Sbjct: 126 LKKALKLLDGGGKGGKSESKYREMVWSVDERGSMGENLLAICLLQGSALHNLIAR 180 >U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical protein T03G11.3 protein. Length = 349 Score = 27.5 bits (58), Expect = 6.5 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = -3 Query: 395 SSGMKRAISSAFKITTVRNEVHT*KYLCRHYTFFF 291 SSG RA++ ++ T +NEV +++ ++FF+ Sbjct: 166 SSGGNRALTGNYRSTPSKNEVRALEFMAIFFSFFW 200 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,652,102 Number of Sequences: 27780 Number of extensions: 188433 Number of successful extensions: 450 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 448 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 450 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1070714938 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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