Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d15
(281 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q13618 Cluster: Cullin-3; n=61; Eumetazoa|Rep: Cullin-3... 54 6e-07
UniRef50_Q17391 Cluster: Cullin-3; n=2; Caenorhabditis|Rep: Cull... 39 0.025
UniRef50_Q7RC59 Cluster: Putative uncharacterized protein PY0592... 33 1.2
UniRef50_Q6KHE5 Cluster: Putative ATP-binding helicase protein; ... 31 4.9
UniRef50_A0CWE2 Cluster: Chromosome undetermined scaffold_3, who... 31 4.9
UniRef50_UPI000045C00F Cluster: hypothetical protein Npun0200685... 31 6.5
UniRef50_Q89LX5 Cluster: Transcriptional regulatory protein; n=1... 31 6.5
UniRef50_Q82XD8 Cluster: Putative uncharacterized protein; n=2; ... 31 6.5
UniRef50_Q7R7J0 Cluster: Plasmodium falciparum CG2; n=4; Plasmod... 31 6.5
UniRef50_Q0H2F5 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 6.5
UniRef50_Q1UZ63 Cluster: Na+/H+ antiporter 1; n=3; Proteobacteri... 30 8.6
UniRef50_Q1MNT9 Cluster: NA; n=1; Lawsonia intracellularis PHE/M... 30 8.6
UniRef50_Q18AQ4 Cluster: Putative ABC transporter, permease prot... 30 8.6
UniRef50_Q7RAH4 Cluster: Putative uncharacterized protein PY0652... 30 8.6
>UniRef50_Q13618 Cluster: Cullin-3; n=61; Eumetazoa|Rep: Cullin-3 -
Homo sapiens (Human)
Length = 768
Score = 54.0 bits (124), Expect = 6e-07
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 201 KMRIRAFPMTMDEKYVERIWSLLKNAI 281
KMRIRAFPMTMDEKYV IW LLKNAI
Sbjct: 15 KMRIRAFPMTMDEKYVNSIWDLLKNAI 41
>UniRef50_Q17391 Cluster: Cullin-3; n=2; Caenorhabditis|Rep:
Cullin-3 - Caenorhabditis elegans
Length = 777
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3
Query: 201 KMRIRAFPMTMDEKYVERIWSLLKNAI 281
KMRIR F T+DE+YV + W LLK AI
Sbjct: 12 KMRIRPFMATIDEQYVTQTWELLKRAI 38
>UniRef50_Q7RC59 Cluster: Putative uncharacterized protein PY05925;
n=10; Plasmodium (Vinckeia)|Rep: Putative
uncharacterized protein PY05925 - Plasmodium yoelii
yoelii
Length = 1985
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 31 KVETIEDIIDVNENNDVLS*KINILCCDIKINYF 132
K + +E ++++N+NND KIN DIK NYF
Sbjct: 191 KYKKLESLMNINKNNDDEKRKINFNVNDIKNNYF 224
>UniRef50_Q6KHE5 Cluster: Putative ATP-binding helicase protein; n=1;
Mycoplasma mobile|Rep: Putative ATP-binding helicase
protein - Mycoplasma mobile
Length = 1057
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 73 NDVLS*KINILCCDIKINYFVGVKNI 150
+D LS ++N+L +++INY +G KNI
Sbjct: 958 HDALSKRLNLLMYEMEINYTIGTKNI 983
>UniRef50_A0CWE2 Cluster: Chromosome undetermined scaffold_3, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_3,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 336
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -2
Query: 280 MAFFNKLHIRSTYFSSIVIGKALILILPGIXSFGKVLFIIGALIYFLHQQNNLFLYHNTV 101
+A FN +I+ S+I + K L+ G+ F V+FI+ + YF+ QQNN YH
Sbjct: 101 LATFNLAYIQREINSTIQL-KLSKLMFAGLIFFFTVVFILNYIDYFI-QQNN---YHLCQ 155
Query: 100 YLFFTI 83
FF +
Sbjct: 156 AQFFNV 161
>UniRef50_UPI000045C00F Cluster: hypothetical protein Npun02006854;
n=1; Nostoc punctiforme PCC 73102|Rep: hypothetical
protein Npun02006854 - Nostoc punctiforme PCC 73102
Length = 279
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 192 IPGKMRIRAFPMTMDEKYVERIWSLLKN 275
IPG++R R + D KYV+R+ +LLK+
Sbjct: 194 IPGRVRFRVPRIACDPKYVQRLEALLKS 221
>UniRef50_Q89LX5 Cluster: Transcriptional regulatory protein; n=1;
Bradyrhizobium japonicum|Rep: Transcriptional regulatory
protein - Bradyrhizobium japonicum
Length = 342
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 141 KKYIKAPMMKSTLPKDX-IPGKMRIRAFPMTMDEKYVERIWSLLKNA 278
K Y+ P+ +S D + G +R+ P D VER+ +L+NA
Sbjct: 206 KHYLSLPLTRSPADLDSMLKGALRLTVLPYRRDRLLVERVRRVLRNA 252
>UniRef50_Q82XD8 Cluster: Putative uncharacterized protein; n=2;
Nitrosomonas|Rep: Putative uncharacterized protein -
Nitrosomonas europaea
Length = 237
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 4 SMDRKTTKLKVETIEDIIDVNENNDVLS*KINIL 105
+M R+ KL ++++IDV ENND +S K++ L
Sbjct: 51 AMLREKNKLLQNRLQELIDVGENNDAISEKMHRL 84
>UniRef50_Q7R7J0 Cluster: Plasmodium falciparum CG2; n=4; Plasmodium
(Vinckeia)|Rep: Plasmodium falciparum CG2 - Plasmodium
yoelii yoelii
Length = 540
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 1 ESMDRKTTKLKVETIEDIIDVNENNDVLS*KINILCCDIKIN 126
E RKT K+K+E +E++ DV+ V + +I+ +IK+N
Sbjct: 34 ELESRKTKKIKIEQVENLGDVSNEEKVKKKEESIIENEIKLN 75
>UniRef50_Q0H2F5 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=3; Vanhornia eucnemidarum|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Vanhornia eucnemidarum
Length = 560
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2
Query: 184 FGKVLFIIGALIYFLHQQNNLFLYHN 107
FG V FI+G IYFL+ QN++F+ N
Sbjct: 13 FGMVYFILG--IYFLYNQNSMFIEWN 36
>UniRef50_Q1UZ63 Cluster: Na+/H+ antiporter 1; n=3;
Proteobacteria|Rep: Na+/H+ antiporter 1 - Candidatus
Pelagibacter ubique HTCC1002
Length = 390
Score = 30.3 bits (65), Expect = 8.6
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -2
Query: 280 MAFFNKLHIRSTYFSSIVIGKALILILP--GIXSFGKVLFIIGALIYFLHQQNNLFLYHN 107
+AFF + +Y S I+I L+L L G+ F L IIGA ++F ++ +
Sbjct: 175 IAFFYSGDLSISYLSLILISYILLLTLNKFGVKKFIPYL-IIGAFMWFFTYKSGIHATIA 233
Query: 106 TVYLFFTIKHR 74
V L TI HR
Sbjct: 234 GVLLASTIPHR 244
>UniRef50_Q1MNT9 Cluster: NA; n=1; Lawsonia intracellularis
PHE/MN1-00|Rep: NA - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 691
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = -2
Query: 154 LIYFLHQQNNLFLY---HNTVYLFF 89
++YFLH N +FLY H Y+FF
Sbjct: 12 ILYFLHTSNKIFLYRYIHKKYYIFF 36
>UniRef50_Q18AQ4 Cluster: Putative ABC transporter, permease
protein; n=3; Clostridium difficile|Rep: Putative ABC
transporter, permease protein - Clostridium difficile
(strain 630)
Length = 229
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = -2
Query: 280 MAFFNKLHIRSTYFSSIVIGKALILILPGIXSFG----KVL-FIIGALIYFLH 137
+ FF + + +FS + L ++LP I FG KV FI+ LIYF++
Sbjct: 106 LVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVY 158
>UniRef50_Q7RAH4 Cluster: Putative uncharacterized protein PY06526;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY06526 - Plasmodium yoelii
yoelii
Length = 400
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 274 FFNKLHIRSTYFSSIVIGKALILILPGIXSFGKVLFIIGALI-YFLHQQNNLFLYHNTVY 98
F L+ T +S +V K ++ GI +F I +I YF+ + N+ Y+NT++
Sbjct: 115 FIGYLYSSCTKYSLLVDLKVNGFLVTGISFSALFVFTINTIISYFIIEDGNIESYYNTIF 174
Query: 97 LFF 89
F
Sbjct: 175 RSF 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,208,308
Number of Sequences: 1657284
Number of extensions: 3324366
Number of successful extensions: 9809
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9808
length of database: 575,637,011
effective HSP length: 71
effective length of database: 457,969,847
effective search space used: 10075336634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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