Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12d15
(281 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC092409-1|AAH92409.1| 768|Homo sapiens cullin 3 protein. 54 8e-08
BC039598-1|AAH39598.1| 768|Homo sapiens cullin 3 protein. 54 8e-08
AF064087-1|AAC36304.1| 768|Homo sapiens cullin 3 protein. 54 8e-08
AF062537-1|AAC36682.1| 768|Homo sapiens cullin 3 protein. 54 8e-08
AB014517-1|BAA31592.2| 786|Homo sapiens KIAA0617 protein protein. 54 8e-08
AC073052-1|AAX93287.1| 746|Homo sapiens unknown protein. 38 0.008
AY337761-1|AAQ01660.1| 744|Homo sapiens cullin 3 isoform protein. 33 0.13
BC075095-1|AAH75095.1| 331|Homo sapiens zinc finger protein 660... 29 2.1
BC075094-1|AAH75094.1| 331|Homo sapiens zinc finger protein 660... 29 2.1
AK094189-1|BAC04303.1| 331|Homo sapiens protein ( Homo sapiens ... 29 2.1
X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein. 29 3.6
BC059387-1|AAH59387.1| 1043|Homo sapiens myosin IA protein. 27 8.4
AJ314647-1|CAC44536.1| 946|Homo sapiens hypothetical protein pr... 27 8.4
AF127026-1|AAD31189.1| 1043|Homo sapiens brush border myosin I p... 27 8.4
AF105424-1|AAC78645.1| 1043|Homo sapiens brush border myosin I p... 27 8.4
AF009961-1|AAC27437.1| 1043|Homo sapiens brush border myosin-I p... 27 8.4
>BC092409-1|AAH92409.1| 768|Homo sapiens cullin 3 protein.
Length = 768
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 201 KMRIRAFPMTMDEKYVERIWSLLKNAI 281
KMRIRAFPMTMDEKYV IW LLKNAI
Sbjct: 15 KMRIRAFPMTMDEKYVNSIWDLLKNAI 41
>BC039598-1|AAH39598.1| 768|Homo sapiens cullin 3 protein.
Length = 768
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 201 KMRIRAFPMTMDEKYVERIWSLLKNAI 281
KMRIRAFPMTMDEKYV IW LLKNAI
Sbjct: 15 KMRIRAFPMTMDEKYVNSIWDLLKNAI 41
>AF064087-1|AAC36304.1| 768|Homo sapiens cullin 3 protein.
Length = 768
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 201 KMRIRAFPMTMDEKYVERIWSLLKNAI 281
KMRIRAFPMTMDEKYV IW LLKNAI
Sbjct: 15 KMRIRAFPMTMDEKYVNSIWDLLKNAI 41
>AF062537-1|AAC36682.1| 768|Homo sapiens cullin 3 protein.
Length = 768
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 201 KMRIRAFPMTMDEKYVERIWSLLKNAI 281
KMRIRAFPMTMDEKYV IW LLKNAI
Sbjct: 15 KMRIRAFPMTMDEKYVNSIWDLLKNAI 41
>AB014517-1|BAA31592.2| 786|Homo sapiens KIAA0617 protein protein.
Length = 786
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 201 KMRIRAFPMTMDEKYVERIWSLLKNAI 281
KMRIRAFPMTMDEKYV IW LLKNAI
Sbjct: 33 KMRIRAFPMTMDEKYVNSIWDLLKNAI 59
>AC073052-1|AAX93287.1| 746|Homo sapiens unknown protein.
Length = 746
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 225 MTMDEKYVERIWSLLKNAI 281
MTMDEKYV IW LLKNAI
Sbjct: 1 MTMDEKYVNSIWDLLKNAI 19
>AY337761-1|AAQ01660.1| 744|Homo sapiens cullin 3 isoform protein.
Length = 744
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 231 MDEKYVERIWSLLKNAI 281
MDEKYV IW LLKNAI
Sbjct: 1 MDEKYVNSIWDLLKNAI 17
>BC075095-1|AAH75095.1| 331|Homo sapiens zinc finger protein 660
protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 7 MDRKTTKLKVETIEDIIDVNENNDVLS*KINILCCDIKIN 126
M RKT K +T++D + E +D S K N CCD N
Sbjct: 1 MRRKTRNFKHKTVKDNKVLTEGSDQESEKDNSQCCDPATN 40
>BC075094-1|AAH75094.1| 331|Homo sapiens zinc finger protein 660
protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 7 MDRKTTKLKVETIEDIIDVNENNDVLS*KINILCCDIKIN 126
M RKT K +T++D + E +D S K N CCD N
Sbjct: 1 MRRKTRNFKHKTVKDNKVLTEGSDQESEKDNSQCCDPATN 40
>AK094189-1|BAC04303.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ36870 fis, clone ASTRO2016847, moderately
similar to ZINC FINGER PROTEIN 135. ).
Length = 331
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 7 MDRKTTKLKVETIEDIIDVNENNDVLS*KINILCCDIKIN 126
M RKT K +T++D + E +D S K N CCD N
Sbjct: 1 MRRKTRNFKHKTVKDNKVLTEGSDQESEKDNSQCCDPATN 40
>X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein.
Length = 480
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 75 RCFIVKNKYTVL*YKNKL-FCWCKKYIKAPMMKSTLPKDXIPGKMRIRAFPMTMDEKYVE 251
RC KN +N+ +C K ++ M + T+ +D +PG P+ + E+ +E
Sbjct: 95 RCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKTIREDGMPGGRNKSIGPVQISEEEIE 154
Query: 252 RIWS 263
RI S
Sbjct: 155 RIMS 158
>BC059387-1|AAH59387.1| 1043|Homo sapiens myosin IA protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 233 HSHRESSDPHFARYXVFWQSTFHHWS 156
++HR+ P RY + +ST+ HW+
Sbjct: 625 YAHRQGYGPFLERYRLLSRSTWPHWN 650
>AJ314647-1|CAC44536.1| 946|Homo sapiens hypothetical protein
protein.
Length = 946
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 KLFCWCKKYIKAPMMKSTLPKDXIPGKMRIRAFPMTMDE-KYVER 254
K + W +K I + + LPKD G + ++ ++ ++ +Y+ER
Sbjct: 575 KAYSWTEKLILSENYLTELPKDSFEGLLSLQYLDLSCNKIRYIER 619
>AF127026-1|AAD31189.1| 1043|Homo sapiens brush border myosin I
protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 233 HSHRESSDPHFARYXVFWQSTFHHWS 156
++HR+ P RY + +ST+ HW+
Sbjct: 625 YAHRQGYGPFLERYRLLSRSTWPHWN 650
>AF105424-1|AAC78645.1| 1043|Homo sapiens brush border myosin I
protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 233 HSHRESSDPHFARYXVFWQSTFHHWS 156
++HR+ P RY + +ST+ HW+
Sbjct: 625 YAHRQGYGPFLERYRLLSRSTWPHWN 650
>AF009961-1|AAC27437.1| 1043|Homo sapiens brush border myosin-I
protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 233 HSHRESSDPHFARYXVFWQSTFHHWS 156
++HR+ P RY + +ST+ HW+
Sbjct: 625 YAHRQGYGPFLERYRLLSRSTWPHWN 650
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,998,722
Number of Sequences: 237096
Number of extensions: 462185
Number of successful extensions: 728
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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